Detail

RLID: RLID00009914
RNA Symbol: SEC61A1
RNA Category: mRNA
Organism: Homo sapiens
Aliase: SEC61, HSEC61, SEC61A
Sequence:
Homology: SEC61 (Saccharomyces cerevisiae), Sec61a1 (Mus musculus)
Subcellular Localization:
Localization Tissue Validated Method PMID
Ribosome Jurkat cell Northern blot 12923260
Description: FIGURE 4. Steady-state mRNA partitioning between cytosolic and ER-bound polysomes. Total RNA was isolated from cytosol and ER membrane fractions of Jurkat and J558 cells, as indicated in Figure 1A. For each reaction, 10 ug of RNA was incubated with one of eight [32P]-labeled oligonucleotide probes representing three different classes of genes, based on the type of protein encoded: cytosolic, ER membrane, and ER lumenal. The nuclease-protected RNA fragments from parallel reactions with cytosol and ER-derived RNA were purified and separated by denaturing acrylamide gel electrophoresis. Quantification was performed by phosphorimager analysis; photostimulated luminescence output (PSL) values are indicated. Digital images of the phosphorimager output are depicted. The data are collected from Figure 4.

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00009915 Ribosome Colon cancer cell Next-generation sequencing 24393600
RLID00009916 Ribosome T-cell line Jurkat S1 nuclease protection assays 12923260
RLID00009917 Ribosome HEK293 cell Next-generation sequencing 22199352
RLID00009918 Cytoplasm U2OS cell RT-PCR 22679391
RLID00009919 Endoplasmic reticulum U2OS cell RT-PCR 22679391
RLID00074814 chromatin K562 CSCD
RLID00074815 cytosol HeLa-S3 CSCD
RLID00074816 cytosol K562 CSCD
RLID00074817 membrane HepG2 CSCD
RLID00074818 nucleolus K562 CSCD
RLID00074819 nucleoplasm K562 CSCD
RLID00074820 nucleus HeLa-S3 CSCD
RLID00074821 nucleus HepG2 CSCD
RLID00074822 nucleus K562 CSCD
RLID00074823 exosome blood exoRBase