Detail

RLID: RLID00000108
RNA Symbol: HOTAIR
RNA Category: lncRNA
Organism: Homo sapiens
Aliase: HOXAS, HOXC-AS4, HOXC11-AS1, NCRNA00072
Sequence:
Network:
Subcellular Localization:
Localization Tissue Validated Method PMID
Nucleus HFF|HLF|HeLa cell Fluorescence in situ hybridization 19571010
Description: Figure 3b: Subcellular localization analysis of lincRNAs by RNA FISH demonstrates localization of lincRNAs to the nucleus. Each panel represents the in situ hybridization of �0 fluorescently labeled DNA oligos with complementarity to the interrogated lincRNA. RNA FISH experiments were performed in male hFF for each represented lincRNA (XIST, HOTAIR, TUG-1, lincMKLN-1, lincFOXF1, and lincSFPQ), and also in female hLF for XIST (XX). White “speckles�indicate the subcellular localization of each lincRNA. The nuclear compartment is demarked by DAPI staining (purple).

Other Subcellular Localization:

RLID Localization Tissue Validated Method PMID
RLID00000104 Nucleus Breast cancer cell qRT-PCR|Chip-seq 21963238
RLID00000105 Nucleus Embryonic stem cell qRT-PCR|Microarray 22193719
RLID00000106 Nucleus Breast cancer cell In situ hybridization 23133536
RLID00000107 Cytoplasm Breast cancer cell In situ hybridization 23133536
RLID00037920 Nucleus Gastric cancer tissues qRT-PCR 26136075
RLID00037921 Cytoplasm Gastric cancer tissues qRT-PCR 26136075
RLID00048479 exosome blood exoRBase
RLID00048480 exosome serum exoRBase 24722995
RLID00048481 exosome serum exoRBase 25099764
RLID00048482 exosome serum exoRBase 27197301