ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-96

MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

ZC3H15,MOXD1,RELA,HMGCS1,GPC3,YTHDC2,NR2E1,EIF4G1,HOXA9,FOXO1,ADCY6,APPL1,NTRK3,PAQR4,NKIRAS2
more » ZC3H15,MOXD1,RELA,HMGCS1,GPC3,YTHDC2,NR2E1,EIF4G1,HOXA9,FOXO1,ADCY6,APPL1,NTRK3,PAQR4,NKIRAS2,PGAM1,SNX16,HNRNPA1,FAM171A1,UBE2N,MED1,JAZF1,CNNM3,FAM105B,SNX7,DEK,ADNP2,ATXN1,THAP9,ARHGEF2,RCOR1,ZMIZ1,ZYX,PRMT5,EVI5,ONECUT2,CNOT6,MTHFD2L,FGF9,TMPO,RAB5B,SPIN4,CHML,SIRT1,NR3C1,EFNB2,PRKCE,PROK2,TAOK1,B4GALT3,SGK3,FBXO21,ALKBH5,ACTN4,BCL2,HNRPDL,SCARB1,EDEM1,SYNGR2,REEP3,FLII,DYNC1H1,CGGBP1,GAPDH,SRXN1,CDKN1A,TRIM4,RPS29,C1orf212,FRS2,TWISTNB,POMP,ITPR3,YWHAG,PRKAR1A,REV1,DDIT3,PPP1R12A,KLHL15,PMS2,SLC25A46,PON2,TRIB2,XIAP,CDON,SUPT4H1,CAMTA1,PRDM16,CPEB1,GTF2A1,RAD51,SLAIN1,REST,ECT2,MGST1,RLF,KRAS,NIPA1,PHF19,NHLRC3,TERF2,ADSS,EEF1A1,FOXO3,RDX,CASP3,KDELR1,PAPD5,HTR1B,SLC39A1,TSPAN14,BAG4

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa04722	Neurotrophin signaling pathway	FRS2,BCL2,FOXO3,RELA,KRAS,YWHAG,NTRK3,	7.84E-4
hsa05200	Pathways in cancer	BCL2,FOXO1,RELA,FGF9,APPL1,RAD51,KRAS,XIAP,CDKN1A,CASP3,	2.27E-2
hsa04210	Apoptosis	BCL2,PRKAR1A,RELA,XIAP,CASP3,	7.54E-2
hsa05215	Prostate cancer	BCL2,FOXO1,RELA,KRAS,CDKN1A,	8.17E-2
hsa05210	Colorectal cancer	BCL2,APPL1,KRAS,CASP3,	3.96E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0042981	regulation of apoptosis	ECT2,BAG4,NR2E1,BCL2,FOXO1,FOXO3,PROK2,NR3C1,SGK3,RELA,KRAS,XIAP,CDKN1A,CASP3,ARHGEF2,DDIT3,ACTN4,SIRT1,PRKCE,	1.39E-5
GO:0043067	regulation of programmed cell death	ECT2,BAG4,NR2E1,BCL2,FOXO1,FOXO3,PROK2,NR3C1,SGK3,RELA,KRAS,XIAP,CDKN1A,CASP3,ARHGEF2,DDIT3,ACTN4,SIRT1,PRKCE,	1.59E-5
GO:0010941	regulation of cell death	ECT2,BAG4,NR2E1,BCL2,FOXO1,FOXO3,PROK2,NR3C1,SGK3,RELA,KRAS,XIAP,CDKN1A,CASP3,ARHGEF2,DDIT3,ACTN4,SIRT1,PRKCE,	1.67E-5
GO:0010033	response to organic substance	BCL2,ADCY6,FOXO1,NR3C1,RELA,APPL1,HMGCS1,KRAS,SCARB1,CDKN1A,MGST1,CASP3,EDEM1,HTR1B,DEK,PRKAR1A,DDIT3,	4.97E-5
GO:0007569	cell aging	TERF2,BCL2,ZMIZ1,KRAS,SIRT1,	8.66E-5

GO:0007568	aging	TERF2,BCL2,RELA,DDIT3,ZMIZ1,KRAS,SIRT1,	1.36E-4
GO:0009719	response to endogenous stimulus	HTR1B,BCL2,ADCY6,PRKAR1A,FOXO1,RELA,DDIT3,APPL1,HMGCS1,KRAS,CDKN1A,MGST1,	1.49E-4
GO:0043066	negative regulation of apoptosis	BAG4,NR2E1,BCL2,FOXO1,PROK2,RELA,SGK3,KRAS,XIAP,CDKN1A,CASP3,	2.21E-4
GO:0043069	negative regulation of programmed cell death	BAG4,NR2E1,BCL2,FOXO1,PROK2,RELA,SGK3,KRAS,XIAP,CDKN1A,CASP3,	2.47E-4
GO:0060548	negative regulation of cell death	BAG4,NR2E1,BCL2,FOXO1,PROK2,RELA,SGK3,KRAS,XIAP,CDKN1A,CASP3,	2.52E-4
GO:0006974	response to DNA damage stimulus	PMS2,TERF2,REV1,UBE2N,FOXO3,DDIT3,RAD51,XIAP,CDKN1A,SIRT1,CASP3,	3.35E-4
GO:0051385	response to mineralocorticoid stimulus	HTR1B,BCL2,KRAS,CDKN1A,	3.72E-4
GO:0009416	response to light stimulus	BCL2,REV1,RELA,ATXN1,KRAS,CDKN1A,CASP3,	4.66E-4
GO:0042325	regulation of phosphorylation	FRS2,BCL2,ADCY6,PRKAR1A,PROK2,TRIB2,ATXN1,KRAS,YWHAG,CDKN1A,CASP3,PRKCE,	4.95E-4
GO:0019220	regulation of phosphate metabolic process	FRS2,BCL2,ADCY6,PRKAR1A,PROK2,TRIB2,ATXN1,KRAS,YWHAG,CDKN1A,CASP3,PRKCE,	6.91E-4
GO:0051174	regulation of phosphorus metabolic process	FRS2,BCL2,ADCY6,PRKAR1A,PROK2,TRIB2,ATXN1,KRAS,YWHAG,CDKN1A,CASP3,PRKCE,	6.91E-4
GO:0009411	response to UV	BCL2,REV1,RELA,CDKN1A,CASP3,	8.35E-4
GO:0045449	regulation of transcription	ADNP2,NR2E1,RLF,HNRPDL,RELA,KRAS,JAZF1,FLII,SUPT4H1,UBE2N,DDIT3,ZMIZ1,GTF2A1,PHF19,TMPO,TERF2,CNOT6,PRDM16,HOXA9,CGGBP1,FOXO1,FOXO3,NR3C1,ATXN1,PRMT5,MED1,RCOR1,REST,CAMTA1,DEK,ONECUT2,PRKAR1A,SIRT1,	8.86E-4
GO:0010243	response to organic nitrogen	RELA,DDIT3,HMGCS1,CDKN1A,MGST1,	1.07E-2
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	TERF2,PRDM16,FOXO1,FOXO3,RELA,ATXN1,SUPT4H1,MED1,ONECUT2,UBE2N,DDIT3,ZMIZ1,RAD51,	1.64E-2
GO:0006357	regulation of transcription from RNA polymerase II promoter	NR2E1,PRDM16,FOXO1,FOXO3,RELA,ATXN1,JAZF1,SUPT4H1,MED1,ONECUT2,DEK,PRKAR1A,ZMIZ1,SIRT1,	2.00E-2
GO:0051173	positive regulation of nitrogen compound metabolic process	TERF2,PRDM16,FOXO1,FOXO3,RELA,ATXN1,SUPT4H1,MED1,ONECUT2,UBE2N,DDIT3,ZMIZ1,RAD51,	2.14E-2
GO:0033554	cellular response to stress	PMS2,TERF2,BCL2,REV1,UBE2N,FOXO3,DDIT3,RAD51,XIAP,CDKN1A,SIRT1,CASP3,	2.38E-2
GO:0006350	transcription	TWISTNB,ADNP2,NR2E1,RLF,HNRPDL,RELA,JAZF1,FLII,SUPT4H1,DDIT3,ZMIZ1,GTF2A1,PHF19,CNOT6,HOXA9,PRDM16,CGGBP1,FOXO1,FOXO3,NR3C1,PRMT5,MED1,RCOR1,REST,CAMTA1,ONECUT2,SIRT1,	2.96E-2
GO:0009314	response to radiation	BCL2,REV1,RELA,ATXN1,KRAS,CDKN1A,CASP3,	3.14E-2
GO:0045165	cell fate commitment	FRS2,CDON,NR2E1,BCL2,ONECUT2,CASP3,	3.22E-2
GO:0045859	regulation of protein kinase activity	FRS2,ADCY6,PRKAR1A,PROK2,TRIB2,KRAS,YWHAG,CDKN1A,CASP3,	3.32E-2
GO:0006916	anti-apoptosis	BAG4,BCL2,FOXO1,PROK2,RELA,SGK3,XIAP,	3.63E-2
GO:0043549	regulation of kinase activity	FRS2,ADCY6,PRKAR1A,PROK2,TRIB2,KRAS,YWHAG,CDKN1A,CASP3,	4.08E-2
GO:0009725	response to hormone stimulus	HTR1B,BCL2,ADCY6,PRKAR1A,FOXO1,RELA,APPL1,KRAS,CDKN1A,	4.81E-2
GO:0051098	regulation of binding	BCL2,UBE2N,RELA,DDIT3,KRAS,SIRT1,	4.84E-2
GO:0051338	regulation of transferase activity	FRS2,ADCY6,PRKAR1A,PROK2,TRIB2,KRAS,YWHAG,CDKN1A,CASP3,	5.22E-2
GO:0051090	regulation of transcription factor activity	UBE2N,RELA,DDIT3,KRAS,SIRT1,	6.39E-2
GO:0050767	regulation of neurogenesis	REST,NR2E1,BCL2,RELA,YWHAG,NTRK3,	6.81E-2
GO:0051789	response to protein stimulus	EDEM1,DEK,BCL2,NR3C1,DDIT3,	7.30E-2
GO:0010604	positive regulation of macromolecule metabolic process	TERF2,BCL2,PRDM16,FOXO1,FOXO3,RELA,ATXN1,SUPT4H1,MED1,ONECUT2,UBE2N,DDIT3,ZMIZ1,RAD51,	8.03E-2
GO:0008406	gonad development	BCL2,FOXO3,FGF9,MGST1,SIRT1,	8.55E-2
GO:0010648	negative regulation of cell communication	HTR1B,ONECUT2,PRDM16,RELA,FGF9,ATXN1,SIRT1,	8.81E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value