ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-30b

MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0004589 hsa-miR-30b-3p	CUGGGAGGUGGAUGUUUACUUC	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .
MI0000441	MIPF0000005	ACCAAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUACAUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAGCUGACUUGGA	MIMAT0000420 hsa-miR-30b-5p	UGUAAACAUCCUACACUCAGCU	This miRNA sequence is predicted based on homology to a verified miRNAfrom mouse , later verified in human .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

RAB22A,RPS27A,SMAD1,CEP152,BDP1,STX17,RORC,POU4F1,RUNX2,C1QBP,ZBTB38,CYB5B,BCL6,PARP1,HEY1
more » RAB22A,RPS27A,SMAD1,CEP152,BDP1,STX17,RORC,POU4F1,RUNX2,C1QBP,ZBTB38,CYB5B,BCL6,PARP1,HEY1,ARF1,PGM3,FAM134C,PLDN,RAB18,UBE2I,CD2AP,HIC2,WDR89,RNF34,WDR43,CDCA7,POLRMT,SOCS1,PIP4K2A,AZIN1,SERBP1,MATR3,ATP5C1,RNPS1,TNRC6C,WDR37,TTLL12,RBBP7,APLN,SNAI1,ARID3A,TSHZ3,GNPDA1,ACTR10,ATG12,CSF1,PRMT7,B3GNT5,MYO1E,ZNF589,SNTB2,GALNT7,SKIL,TAOK1,COPS7B,CLDN12,BECN1,SOX4,CXXC4,BCL2,GLCE,MYBBP1A,YOD1,GFPT2,CHD1,OLFML2B,CAMKV,TNFSF10,ZFYVE20,G3BP1,AP2A1,RPS4X,PDCD10,PHF13,RBM14,ITGB3,RRAGD,RGMB,TRIM59,KLF4,GALNTL2,FERMT2,DDAH1,ZDHHC17,ZNF646,KLF10,HMGN2,CAT,PLIN3,EML4,EIF2B1,FAM8A1,FEM1B,LIN28A,ACER3,NAA25,ZNF567,SNRNP200,BAZ1B,TMEM106B,KLHL15,CCNE2,ZNF770,IKZF4,SH2B3,IMPDH2,TRERF1,RFX7,GNA13,LRP8,FBXO3,TMED5,KLHL28,CHAT,DCAF12,PPP1R12B,GNAZ,USP53,OTUD4,ZNF543,DNMT1,EYA3,MCFD2,ELOVL4,NIPBL,NCOA6,SHC1,PNN,CASP3,KBTBD6,PCNT,SRPR,METTL21D,MIER3,SYPL1,NACC2

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa00520	Amino sugar and nucleotide sugar metabolism	GFPT2,GNPDA1,PGM3,	5.28E-1
hsa05014	Amyotrophic lateral sclerosis (ALS)	BCL2,CAT,CASP3,	7.33E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0045449	regulation of transcription	RUNX2,RAB18,NCOA6,SOX4,NACC2,HEY1,UBE2I,ZNF543,CHD1,CAT,TRERF1,DNMT1,LIN28A,POU4F1,CDCA7,PRMT7,ZBTB38,TSHZ3,IKZF4,BDP1,ARID3A,HIC2,SKIL,RFX7,HMGN2,BCL6,MYBBP1A,ZNF567,PNN,EYA3,ZNF589,RGMB,RORC,RPS27A,KLF10,ZNF646,MIER3,KLF4,ZNF770,BAZ1B,RBM14,SMAD1,RBBP7,	7.78E-6
GO:0006350	transcription	RUNX2,NCOA6,SOX4,HEY1,ZNF543,TRERF1,DNMT1,POU4F1,CDCA7,PRMT7,RNPS1,ZBTB38,TSHZ3,IKZF4,BDP1,HIC2,ARID3A,SKIL,BCL6,POLRMT,MYBBP1A,ZNF567,PNN,EYA3,ZNF589,RORC,KLF10,MIER3,KLF4,ZNF770,BAZ1B,RBM14,SMAD1,PARP1,RBBP7,	8.19E-5
GO:0010605	negative regulation of macromolecule metabolic process	RUNX2,EIF2B1,NACC2,ITGB3,UBE2I,HEY1,SOCS1,DNMT1,RPS27A,LIN28A,KLF10,TNRC6C,HIC2,KLF4,SKIL,BCL6,SMAD1,RBBP7,	1.34E-4
GO:0010629	negative regulation of gene expression	RUNX2,NACC2,UBE2I,HEY1,DNMT1,LIN28A,KLF10,TNRC6C,HIC2,KLF4,SKIL,BCL6,SMAD1,RBBP7,	3.18E-4
GO:0051252	regulation of RNA metabolic process	RUNX2,RAB18,NCOA6,SOX4,HEY1,UBE2I,CHD1,ZNF543,TRERF1,DNMT1,POU4F1,LIN28A,ZBTB38,TSHZ3,HIC2,ARID3A,SKIL,RFX7,BCL6,HMGN2,MYBBP1A,ZNF567,SERBP1,ZNF589,RORC,KLF10,KLF4,RBM14,SMAD1,RBBP7,	3.97E-4

GO:0006355	regulation of transcription, DNA-dependent	RUNX2,RAB18,NCOA6,SOX4,UBE2I,HEY1,CHD1,ZNF543,TRERF1,DNMT1,POU4F1,LIN28A,ZBTB38,TSHZ3,HIC2,ARID3A,SKIL,RFX7,BCL6,HMGN2,MYBBP1A,ZNF567,ZNF589,RORC,KLF10,KLF4,RBM14,SMAD1,RBBP7,	6.34E-4
GO:0010608	posttranscriptional regulation of gene expression	BCL2,EIF2B1,SOX4,SERBP1,TNRC6C,RPS4X,LIN28A,SMAD1,	2.04E-2
GO:0010558	negative regulation of macromolecule biosynthetic process	RUNX2,EIF2B1,NACC2,UBE2I,HEY1,ITGB3,DNMT1,KLF10,HIC2,KLF4,SKIL,BCL6,RBBP7,	2.19E-2
GO:0009890	negative regulation of biosynthetic process	RUNX2,EIF2B1,NACC2,UBE2I,HEY1,ITGB3,DNMT1,KLF10,HIC2,KLF4,SKIL,BCL6,RBBP7,	3.20E-2
GO:0030097	hemopoiesis	CSF1,BCL2,NCOA6,SOX4,PGM3,MYO1E,SH2B3,BCL6,	3.81E-2
GO:0016481	negative regulation of transcription	RUNX2,KLF10,NACC2,HIC2,KLF4,UBE2I,SKIL,HEY1,DNMT1,BCL6,RBBP7,	5.36E-2
GO:0010604	positive regulation of macromolecule metabolic process	RUNX2,CSF1,BCL2,NCOA6,SHC1,SOX4,EYA3,RGMB,DNMT1,TRERF1,RPS27A,ZBTB38,KLF4,RPS4X,RBM14,SMAD1,	5.47E-2
GO:0048534	hemopoietic or lymphoid organ development	CSF1,BCL2,NCOA6,SOX4,PGM3,MYO1E,SH2B3,BCL6,	6.42E-2
GO:0031327	negative regulation of cellular biosynthetic process	RUNX2,KLF10,EIF2B1,NACC2,HIC2,KLF4,UBE2I,SKIL,HEY1,DNMT1,BCL6,RBBP7,	7.67E-2
GO:0044265	cellular macromolecule catabolic process	USP53,RNF34,UBE2I,YOD1,SOCS1,RPS27A,LIN28A,FBXO3,CASP3,ATG12,KLHL15,RNPS1,CD2AP,FEM1B,	7.94E-2
GO:0051173	positive regulation of nitrogen compound metabolic process	RUNX2,NCOA6,SHC1,SOX4,EYA3,RGMB,TRERF1,RPS27A,DDAH1,ZBTB38,KLF4,RBM14,SMAD1,	8.00E-2
GO:0006357	regulation of transcription from RNA polymerase II promoter	RUNX2,NCOA6,HEY1,CHD1,DNMT1,POU4F1,KLF10,ZBTB38,KLF4,SKIL,RBM14,BCL6,SMAD1,RBBP7,	8.12E-2
GO:0033554	cellular response to stress	ATG12,BCL2,EIF2B1,NCOA6,EYA3,BECN1,BAZ1B,CAT,RBM14,BCL6,CASP3,PARP1,	8.17E-2
GO:0002520	immune system development	CSF1,BCL2,NCOA6,SOX4,PGM3,MYO1E,SH2B3,BCL6,	8.79E-2
GO:0010628	positive regulation of gene expression	RUNX2,CSF1,NCOA6,ZBTB38,SOX4,KLF4,RGMB,DNMT1,TRERF1,RBM14,SMAD1,RPS27A,	9.84E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value