ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-24

MI0000231	MIPF0000041	CUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUCACACACUGGCUCAGUUCAGCAGGAACAGGAG	MIMAT0000218 mmu-miR-24-1-5p	GUGCCUACUGAGCUGAUAUCAGU
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0000219 mmu-miR-24-3p	UGGCUCAGUUCAGCAGGAACAG
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0005440 mmu-miR-24-2-5p	GUGCCUACUGAGCUGAAACAGU
MI0000231	MIPF0000041	CUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUCACACACUGGCUCAGUUCAGCAGGAACAGGAG	MIMAT0000218 mmu-miR-24-1-5p	GUGCCUACUGAGCUGAUAUCAGU
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0000219 mmu-miR-24-3p	UGGCUCAGUUCAGCAGGAACAG
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0005440 mmu-miR-24-2-5p	GUGCCUACUGAGCUGAAACAGU
MI0000231	MIPF0000041	CUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUCACACACUGGCUCAGUUCAGCAGGAACAGGAG	MIMAT0000218 mmu-miR-24-1-5p	GUGCCUACUGAGCUGAUAUCAGU
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0000219 mmu-miR-24-3p	UGGCUCAGUUCAGCAGGAACAG
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0005440 mmu-miR-24-2-5p	GUGCCUACUGAGCUGAAACAGU
MI0000572	MIPF0000041	GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA	MIMAT0000219 mmu-miR-24-3p	UGGCUCAGUUCAGCAGGAACAG

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

Hdgfrp3,Cplx2,Sacs,Sparc,Nup210,Tnks,Smad5,Negr1,Drd1a,Nfia,Xpo7,Crtc1,Flna,Tmem87b,Zcchc24
more » Hdgfrp3,Cplx2,Sacs,Sparc,Nup210,Tnks,Smad5,Negr1,Drd1a,Nfia,Xpo7,Crtc1,Flna,Tmem87b,Zcchc24,Snx27,Slitrk5,Foxn3,Syt1,Zhx3,Mbd6,Il6st,Ndrg3,Clmn,Nrgn,Tppp,Shisa6,1700052N19Rik,Slc30a10,Plxna2,Usp40,Ank3,Nfix,Sri,Arhgap26,Apba1,Scn2a1,Ogt,Sez6,Fat1,Rictor,Nrxn3,Slc7a1,Reep2,Abi2,Rab31,Rnf138,Ttc3,Htr5a,Nucks1,Pcsk1n,Ugcg,Pak7,Cnot6,Fam134c,Itsn1,Lmtk2,Rhbdl1,Kif21b,Abcd1,Spsb4,Bpnt1,Reep1,Gnaq,Pign,Tmed7,Ept1,Soat1,4921517L17Rik,Acvr1b,4933426M11Rik,Pknox2,9430020K01Rik,Fam115a,Calu,Adcyap1r1,Smad3,Gprasp1,Preb,AW549877,Zfp704,Gpr37l1,Als2,N28178,Nrp2,Nos3,Sp1,Entpd6,Gnal,Lipa,Cnst,Slc12a6,0610010F05Rik,Has3,Abcg1,Dpagt1,Add3,Mcm2,Os9,Acsl4,Abr,Myh10,Klhl24,Wdr13,Zmat3,Slc18a2,Clcn3,H2afx,Lmbr1,Kcnc3,Nf1,Cds2,Rab3d,Nat8l,Gabrb2,Kcnk6,Rasal1,Csnk1g1,St8sia2,L1cam,Vhl,5730559C18Rik,2610008E11Rik,Igfbp5,Gatsl2,Fkbp1b,Mmp24,Hiat1,Bcl2l11,Dcaf8,Zfp395,AU019823,Ccdc56,Lsamp,Pclo,Cmtm6,Gna14,Ccdc45,Klf6,Hbegf,Scd2,AI480653,Trappc4,Celf5,Extl2,Sh3d19,Col4a1,Ndfip1,Ubn1,Nacc2,Sfxn5,Kcnj3,Tpst1,Txnl1,Macf1,Hmox1,Zfp697,Pml,Hic2,Epb4.1l1,Zfp664,Xpr1,Nr2c2,Nfat5,Syt2,Tspyl4,Med10,Casc4,Gba2,Chl1,F630043A04Rik,Crhr1,Cbfa2t2,Astn1,Gal3st3,Ggta1,Mllt11,Mdk,Grina,Slc25a12,,Gpt2,Ppm1k,Csnk1a1,Srsf1,Wdr59,Cd93,1700025G04Rik,Gnb5,Dpp6,Lrtm2,Sema4g,Plch1,Pde1a,2310044H10Rik,Plec,Pogz,Adam19,Scrt2,Srsf11,Ifnar1,Slc22a23,Zfp605,Rragc,2510039O18Rik,Ssfa2,2700089E24Rik,Slc25a25,Camkk1,Slc35e2,Ttyh3,Zxdc,Lrrc3,Atp1a2,Cbx1,Ldha,Ankrd52,Fam117b,Kdm4c,Nedd4,Srxn1,Kif3b,Dtna,Klc2,Smad4,Avl9,Rnf170,Zfp397,Fbxl20,Rab3gap1,Ubr4,Stk38,Fam76b,Snap47,Kifap3,Esyt2,Gpr88,Lrch1,Ctnnbip1,Fam131a,Mef2c,Cep120,Slc15a4,Gabpb2,2810030E01Rik,Camk2d,Syp,Slc4a8,Trip10,Rab43,Mak16,Myog,Lrrc58,Hprt,Gcap14,Grin1,Rps6kl1,Gria3,Sema4a,Naa40,Pgrmc2,4632411B12Rik,Cog3,Kdm5b,Lbh,Cep170,Atcay,Plod2,Fam168b,Igf2,Setd7,Agpat3,Fgfr1,Celf4,Cnnm3,Atp2a2,Rpl12,Arxes2,Casp9,Kcnj2,Srgap2,Adpgk,Snap91,Epn1,Spnb3,Exoc6b,Bahcc1,Nsd1,Ece1,Lims1,Unc5b,Ccnt2,Letmd1,Bsn,Adcy1,Rnf24,Rtn1,Abl1,Eno2,Gap43,Zmym3,Fut9,Kitl,C530028O21Rik,Sp8,Mdh1,D14Abb1e,Ldb2

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

mmu04020	Calcium signaling pathway	Nos3,Adcy1,Gna14,Drd1a,Grin1,Gnal,Camk2d,Gnaq,Pde1a,Atp2a2,Htr5a,	8.12E-4
mmu04360	Axon guidance	Abl1,Pak7,Srgap2,Sema4g,Plxna2,L1cam,Nfat5,Sema4a,Unc5b,	1.03E-2
mmu04350	TGF-beta signaling pathway	Smad4,Acvr1b,Smad3,Smad5,Sp1,	4.86E-1
mmu05200	Pathways in cancer	Smad4,Acvr1b,Abl1,Smad3,Kitl,Fgfr1,Pml,Casp9,Col4a1,Vhl,	6.89E-1
mmu04310	Wnt signaling pathway	Smad4,Smad3,Csnk1a1,Ctnnbip1,Camk2d,Nfat5,	8.70E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0001975	response to amphetamine	Slc18a2,Drd1a,Grin1,Hprt,Gnal,	5.80E-5
GO:0019226	transmission of nerve impulse	Trappc4,Grin1,Fkbp1b,Nrxn3,Nf1,Apba1,Als2,Drd1a,Syp,Pclo,Syt1,Scd2,Atp1a2,	1.50E-4
GO:0010243	response to organic nitrogen	Slc18a2,Drd1a,Grin1,Hprt,Gnal,	1.94E-4
GO:0014075	response to amine stimulus	Slc18a2,Drd1a,Grin1,Hprt,Gnal,	1.94E-4
GO:0031175	neuron projection development	Ank3,Chl1,Gap43,Lmtk2,Als2,Trappc4,Abi2,Myh10,Fgfr1,Hprt,Slitrk5,L1cam,	4.37E-4

GO:0048666	neuron development	Ank3,Chl1,Trappc4,Lmtk2,Abi2,Fgfr1,Slitrk5,Als2,Gap43,Drd1a,Myh10,Hprt,Gnaq,L1cam,	4.50E-4
GO:0001649	osteoblast differentiation	Smad3,Smad5,Mef2c,Igfbp5,Igf2,Nf1,	6.52E-4
GO:0000902	cell morphogenesis	Ank3,Chl1,Lmtk2,Fat1,Slitrk5,Lipa,Lims1,Als2,Gap43,Myh10,Macf1,Hprt,Csnk1a1,L1cam,	7.58E-4
GO:0001503	ossification	Smad3,Smad5,Mef2c,Igfbp5,Igf2,Myog,Sp1,Nf1,	1.04E-2
GO:0007610	behavior	Adcy1,Crhr1,Slc18a2,Chl1,Cmtm6,Abi2,Grin1,Nrp2,Nf1,Apba1,Astn1,Als2,Drd1a,Hprt,Gnaq,Atp1a2,	1.13E-2
GO:0006928	cell motion	Ank3,Chl1,Kitl,Lmtk2,Abi2,Hbegf,Nrp2,Vhl,Plxna2,Astn1,Gap43,Drd1a,Myh10,Macf1,L1cam,	1.25E-2
GO:0007268	synaptic transmission	Apba1,Als2,Trappc4,Drd1a,Grin1,Syp,Nrxn3,Syt1,Pclo,Atp1a2,	1.42E-2
GO:0060348	bone development	Smad3,Smad5,Mef2c,Igfbp5,Igf2,Myog,Sp1,Nf1,	1.95E-2
GO:0045761	regulation of adenylate cyclase activity	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	1.98E-2
GO:0019933	cAMP-mediated signaling	Drd1a,Flna,Gnal,Gnaq,Pclo,Htr5a,	2.13E-2
GO:0006811	ion transport	Slc25a12,Sri,Ttyh3,Cnnm3,Grin1,Kcnj3,Fkbp1b,Gria3,Slc12a6,Kcnj2,Camk2d,Scn2a1,Kcnc3,Slc30a10,Slc4a8,Clcn3,Kcnk6,Gabrb2,Slc22a23,Atp2a2,Atp1a2,Sfxn5,	2.26E-2
GO:0051339	regulation of lyase activity	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	2.29E-2
GO:0031279	regulation of cyclase activity	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	2.29E-2
GO:0032989	cellular component morphogenesis	Ank3,Chl1,Lmtk2,Fat1,Slitrk5,Lipa,Lims1,Als2,Gap43,Myh10,Macf1,Hprt,Csnk1a1,L1cam,	2.39E-2
GO:0030182	neuron differentiation	Ank3,Chl1,Trappc4,Lmtk2,Abi2,Fgfr1,Slitrk5,Smad4,Als2,Gap43,Drd1a,Myh10,Hprt,Gnaq,L1cam,	2.70E-2
GO:0030817	regulation of cAMP biosynthetic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	2.83E-2
GO:0019935	cyclic-nucleotide-mediated signaling	Drd1a,Flna,Gnal,Gnaq,Pclo,Htr5a,	3.02E-2
GO:0007212	dopamine receptor signaling pathway	Drd1a,Flna,Gnal,Gnaq,	3.10E-2
GO:0030814	regulation of cAMP metabolic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	3.23E-2
GO:0003012	muscle system process	Nos3,Smad5,Drd1a,Fkbp1b,Srsf1,Camk2d,	3.23E-2
GO:0045762	positive regulation of adenylate cyclase activity	Adcy1,Drd1a,Gnal,Gnaq,Nf1,	3.47E-2
GO:0051349	positive regulation of lyase activity	Adcy1,Drd1a,Gnal,Gnaq,Nf1,	3.47E-2
GO:0031281	positive regulation of cyclase activity	Adcy1,Drd1a,Gnal,Gnaq,Nf1,	3.47E-2
GO:0051241	negative regulation of multicellular organismal process	Nos3,Ndfip1,Drd1a,Fkbp1b,Hmox1,Atp2a2,Atp1a2,	3.84E-2
GO:0030808	regulation of nucleotide biosynthetic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	3.90E-2
GO:0030802	regulation of cyclic nucleotide biosynthetic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	3.90E-2
GO:0007267	cell-cell signaling	Apba1,Als2,Trappc4,Drd1a,Grin1,Fkbp1b,Fgfr1,Syp,Nrxn3,Syt1,Pclo,Atp1a2,	4.26E-2
GO:0021537	telencephalon development	Drd1a,Myh10,Grin1,Cep120,Hprt,Nf1,	4.40E-2
GO:0030799	regulation of cyclic nucleotide metabolic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	4.67E-2
GO:0048812	neuron projection morphogenesis	Ank3,Chl1,Gap43,Lmtk2,Als2,Myh10,Hprt,Slitrk5,L1cam,	4.96E-2
GO:0006140	regulation of nucleotide metabolic process	Adcy1,Drd1a,Flna,Gnal,Gnaq,Nf1,	5.24E-2
GO:0030001	metal ion transport	Sri,Grin1,Kcnj3,Fkbp1b,Slc12a6,Kcnj2,Camk2d,Scn2a1,Kcnc3,Slc30a10,Slc4a8,Kcnk6,Atp2a2,Atp1a2,Sfxn5,	6.60E-2
GO:0010604	positive regulation of macromolecule metabolic process	Kitl,Nedd4,Grin1,Pml,Crtc1,Klf6,Nsd1,Zxdc,Nfia,Nfat5,Smad4,Smad3,Ndfip1,Smad5,Mef2c,Nfix,Myog,Sp1,Rictor,	6.69E-2
GO:0032940	secretion by cell	Apba1,Myh10,Fkbp1b,Exoc6b,Nrxn3,Syt1,Pclo,Cplx2,Rab3d,	6.86E-2
GO:0006836	neurotransmitter transport	Slc18a2,Nrxn3,Syt1,Pclo,Cplx2,Atp1a2,	6.88E-2
GO:0051345	positive regulation of hydrolase activity	Als2,Drd1a,Pml,Casp9,Gnaq,Nf1,	7.25E-2
GO:0019932	second-messenger-mediated signaling	Drd1a,Flna,Gnal,Gnaq,Pclo,Htr5a,Plch1,	8.53E-2
GO:0030030	cell projection organization	Ank3,Chl1,Gap43,Lmtk2,Als2,Trappc4,Abi2,Myh10,Fgfr1,Hprt,Slitrk5,L1cam,	8.54E-2
GO:0008542	visual learning	Drd1a,Grin1,Nf1,Atp1a2,	9.01E-2
GO:0045822	negative regulation of heart contraction	Fkbp1b,Atp2a2,Atp1a2,	9.23E-2
GO:0060048	cardiac muscle contraction	Smad5,Srsf1,Camk2d,	9.23E-2
GO:0007626	locomotory behavior	Slc18a2,Chl1,Apba1,Astn1,Cmtm6,Als2,Drd1a,Grin1,Nrp2,Atp1a2,	9.82E-2
GO:0016477	cell migration	Chl1,Astn1,Kitl,Abi2,Drd1a,Myh10,Hbegf,Nrp2,Vhl,Plxna2,	1.00E-1

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value