ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-130a

MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0004593 hsa-miR-130a-5p	UUCACAUUGUGCUACUGUCUGC	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .
MI0000448	MIPF0000034	UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG	MIMAT0000425 hsa-miR-130a-3p	CAGUGCAAUGUUAAAAGGGCAU	miR-130a was first identified by cloning studies in mouse . Itsexpression was later verified in human embryonic stem cells .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

DNM2,ATG2B,IFITM1,MAFB,ESR1,BMPR2,CTSA,ATXN1,APP,TAC1,CSF1,ACVR1,RAB5A,DICER1,MET
more » DNM2,ATG2B,IFITM1,MAFB,ESR1,BMPR2,CTSA,ATXN1,APP,TAC1,CSF1,ACVR1,RAB5A,DICER1,MET,HOXA5,PPARG,KLF4,CD69,SMAD4,LDLR,RUNX3,MEOX2,HOXA10,ATG16L1,PPARA,SMAD5,STK38L

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa04350	TGF-beta signaling pathway	BMPR2,SMAD5,ACVR1,SMAD4,	1.22E-2
hsa04144	Endocytosis	LDLR,RAB5A,DNM2,MET,	1.01E-1
hsa04060	Cytokine-cytokine receptor interaction	BMPR2,CSF1,ACVR1,MET,	2.63E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0010628	positive regulation of gene expression	PPARA,CSF1,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,ESR1,PPARG,APP,	3.58E-9
GO:0010604	positive regulation of macromolecule metabolic process	BMPR2,CSF1,MAFB,ACVR1,ATXN1,ESR1,PPARG,APP,PPARA,SMAD5,SMAD4,KLF4,ZFPM2,	1.63E-8
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	PPARA,MAFB,ATXN1,SMAD5,KLF4,SMAD4,ZFPM2,PPARG,APP,	3.00E-7
GO:0007389	pattern specification process	BMPR2,HOXA5,HOXA10,MAFB,SMAD5,ACVR1,SMAD4,MEOX2,	5.14E-7
GO:0045941	positive regulation of transcription	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	5.90E-7

GO:0048598	embryonic morphogenesis	BMPR2,HOXA5,HOXA10,MAFB,DICER1,ACVR1,KLF4,SMAD4,	1.31E-6
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	1.37E-6
GO:0051173	positive regulation of nitrogen compound metabolic process	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	1.78E-6
GO:0045893	positive regulation of transcription, DNA-dependent	PPARA,MAFB,ATXN1,SMAD5,KLF4,SMAD4,ZFPM2,PPARG,APP,	2.00E-6
GO:0010557	positive regulation of macromolecule biosynthetic process	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	2.03E-6
GO:0051254	positive regulation of RNA metabolic process	PPARA,MAFB,ATXN1,SMAD5,KLF4,SMAD4,ZFPM2,PPARG,APP,	2.13E-6
GO:0031328	positive regulation of cellular biosynthetic process	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	2.98E-6
GO:0009891	positive regulation of biosynthetic process	PPARA,MAFB,ATXN1,SMAD5,ACVR1,KLF4,SMAD4,ZFPM2,PPARG,APP,	3.35E-6
GO:0006355	regulation of transcription, DNA-dependent	HOXA5,MAFB,HOXA10,RUNX3,ATXN1,ESR1,PPARG,APP,PPARA,SMAD5,SMAD4,KLF4,MEOX2,ZFPM2,	6.35E-6
GO:0051252	regulation of RNA metabolic process	HOXA5,MAFB,HOXA10,RUNX3,ATXN1,ESR1,PPARG,APP,PPARA,SMAD5,SMAD4,KLF4,MEOX2,ZFPM2,	8.16E-6
GO:0045449	regulation of transcription	HOXA5,MAFB,HOXA10,RUNX3,ACVR1,ATXN1,DNM2,ESR1,PPARG,APP,PPARA,SMAD5,KLF4,SMAD4,MEOX2,ZFPM2,	1.55E-5
GO:0048729	tissue morphogenesis	BMPR2,HOXA5,RUNX3,ACVR1,KLF4,SMAD4,	2.06E-5
GO:0003013	circulatory system process	PPARA,BMPR2,TAC1,SMAD5,MEOX2,PPARG,	2.42E-5
GO:0008015	blood circulation	PPARA,BMPR2,TAC1,SMAD5,MEOX2,PPARG,	2.42E-5
GO:0003002	regionalization	BMPR2,HOXA5,HOXA10,MAFB,SMAD4,MEOX2,	3.19E-5
GO:0006357	regulation of transcription from RNA polymerase II promoter	PPARA,MAFB,ATXN1,SMAD5,KLF4,SMAD4,ZFPM2,PPARG,APP,	4.40E-5
GO:0035295	tube development	BMPR2,HOXA5,DICER1,ACVR1,SMAD4,ZFPM2,	5.41E-5
GO:0045597	positive regulation of cell differentiation	BMPR2,CSF1,SMAD5,ACVR1,SMAD4,PPARG,	6.54E-5
GO:0030509	BMP signaling pathway	BMPR2,SMAD5,ACVR1,SMAD4,	7.92E-5
GO:0009952	anterior/posterior pattern formation	BMPR2,HOXA5,HOXA10,SMAD4,MEOX2,	1.37E-4
GO:0051094	positive regulation of developmental process	BMPR2,CSF1,SMAD5,ACVR1,SMAD4,PPARG,	1.63E-4
GO:0048754	branching morphogenesis of a tube	HOXA5,DICER1,ACVR1,SMAD4,	2.54E-4
GO:0010629	negative regulation of gene expression	PPARA,DICER1,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	3.16E-4
GO:0007369	gastrulation	BMPR2,ACVR1,KLF4,SMAD4,	3.16E-4
GO:0001763	morphogenesis of a branching structure	HOXA5,DICER1,ACVR1,SMAD4,	3.73E-4
GO:0030278	regulation of ossification	BMPR2,CSF1,SMAD5,ACVR1,	4.35E-4
GO:0031667	response to nutrient levels	PPARA,BMPR2,ATG16L1,KLF4,PPARG,	5.07E-4
GO:0042127	regulation of cell proliferation	BMPR2,CSF1,IFITM1,TAC1,RUNX3,KLF4,SMAD4,PPARG,	5.44E-4
GO:0045596	negative regulation of cell differentiation	PPARA,MAFB,DICER1,KLF4,PPARG,	7.17E-4
GO:0009991	response to extracellular stimulus	PPARA,BMPR2,ATG16L1,KLF4,PPARG,	7.68E-4
GO:0030324	lung development	BMPR2,HOXA5,DICER1,ZFPM2,	8.74E-4
GO:0008217	regulation of blood pressure	PPARA,BMPR2,TAC1,PPARG,	9.00E-4
GO:0030323	respiratory tube development	BMPR2,HOXA5,DICER1,ZFPM2,	9.53E-4
GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway	BMPR2,SMAD5,ACVR1,SMAD4,	9.81E-4
GO:0006350	transcription	PPARA,BMPR2,HOXA5,HOXA10,MAFB,RUNX3,SMAD5,KLF4,SMAD4,ZFPM2,ESR1,PPARG,	9.88E-4
GO:0010743	regulation of foam cell differentiation	PPARA,CSF1,PPARG,	1.03E-2
GO:0045669	positive regulation of osteoblast differentiation	BMPR2,SMAD5,ACVR1,	1.03E-2
GO:0060541	respiratory system development	BMPR2,HOXA5,DICER1,ZFPM2,	1.12E-2
GO:0016481	negative regulation of transcription	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	1.60E-2
GO:0042325	regulation of phosphorylation	BMPR2,CSF1,ATXN1,SMAD4,MET,APP,	1.71E-2
GO:0035239	tube morphogenesis	HOXA5,DICER1,ACVR1,SMAD4,	1.79E-2
GO:0051174	regulation of phosphorus metabolic process	BMPR2,CSF1,ATXN1,SMAD4,MET,APP,	2.04E-2
GO:0019220	regulation of phosphate metabolic process	BMPR2,CSF1,ATXN1,SMAD4,MET,APP,	2.04E-2
GO:0001707	mesoderm formation	BMPR2,ACVR1,KLF4,	2.14E-2
GO:0010605	negative regulation of macromolecule metabolic process	PPARA,DICER1,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	2.26E-2
GO:0045165	cell fate commitment	SMAD5,KLF4,SMAD4,PPARG,	2.32E-2
GO:0048332	mesoderm morphogenesis	BMPR2,ACVR1,KLF4,	2.39E-2
GO:0042592	homeostatic process	LDLR,CSF1,TAC1,ATXN1,SMAD5,PPARG,APP,	2.53E-2
GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	2.58E-2
GO:0001704	formation of primary germ layer	BMPR2,ACVR1,KLF4,	2.64E-2
GO:0051172	negative regulation of nitrogen compound metabolic process	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	2.74E-2
GO:0045667	regulation of osteoblast differentiation	BMPR2,SMAD5,ACVR1,	3.05E-2
GO:0010558	negative regulation of macromolecule biosynthetic process	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	3.44E-2
GO:0031327	negative regulation of cellular biosynthetic process	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	3.84E-2
GO:0007167	enzyme linked receptor protein signaling pathway	BMPR2,SMAD5,ACVR1,SMAD4,MET,	3.86E-2
GO:0009890	negative regulation of biosynthetic process	PPARA,ATXN1,KLF4,SMAD4,ZFPM2,PPARG,	4.20E-2
GO:0045892	negative regulation of transcription, DNA-dependent	PPARA,KLF4,SMAD4,ZFPM2,PPARG,	4.45E-2
GO:0008285	negative regulation of cell proliferation	IFITM1,RUNX3,KLF4,SMAD4,PPARG,	4.68E-2
GO:0051253	negative regulation of RNA metabolic process	PPARA,KLF4,SMAD4,ZFPM2,PPARG,	4.73E-2
GO:0009725	response to hormone stimulus	PPARA,LDLR,TAC1,ESR1,PPARG,	4.96E-2
GO:0007612	learning	TAC1,ATXN1,APP,	5.87E-2
GO:0007179	transforming growth factor beta receptor signaling pathway	SMAD5,ACVR1,SMAD4,	5.87E-2
GO:0009719	response to endogenous stimulus	PPARA,LDLR,TAC1,ESR1,PPARG,	7.01E-2
GO:0048514	blood vessel morphogenesis	DICER1,ACVR1,MEOX2,ZFPM2,	7.46E-2
GO:0007517	muscle organ development	MEOX2,ZFPM2,MET,APP,	7.46E-2
GO:0010891	negative regulation of sequestering of triglyceride	PPARA,PPARG,	7.66E-2
GO:0010324	membrane invagination	LDLR,RAB5A,DNM2,APP,	8.37E-2
GO:0006897	endocytosis	LDLR,RAB5A,DNM2,APP,	8.37E-2
GO:0007498	mesoderm development	BMPR2,ACVR1,KLF4,	8.81E-2
GO:0048469	cell maturation	RUNX3,PPARG,APP,	9.04E-2
GO:0010871	negative regulation of receptor biosynthetic process	PPARA,PPARG,	9.57E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value