Go Back

Detail Information


Basic information:


Untranslated mRNA: Sponge mRNA

Related IDs cncRNA ID CNC_M_001811
Name RUNX1
Gene ID 861
Location Coordinate(Strand) 21:34787801-36004667(-)
Locus Sequence
Organism Homo sapiens

Evidence support:

  
In vivo/vitro assay In vitro assay
Low-throughput method Transfection assay;Western blotting;qRT-PCR;Luciferase assay;siRNA;Proliferation assay
High-throughput method /
Tissue/Cell SNB19 cell;SF188 cell
Description of experimental evidence The mRNA was detected by transfection assay, western blotting, qRT-PCR, luciferase assay, siRNA and proliferation assay in SNB19 cell and SF188 cell, which can act as a decoy for Pten-targeting microRNAs.

Orthologues:

  
Chimpanzee ENSPTRG00000013883  
Mouse ENSMUSG00000022952  
Drosophila FBgn0002576  
Zebrafish ENSDARG00000087646  

References:

  
PMID 22000015
Description These include 7,000 genes whose transcripts act as miR sponges and 148 genes that act through alternative, nonsponge interactions. Biochemical analyses in cell lines confirmed that this network regulates established drivers of tumor initiation and subtype implementation, including PTEN, PDGFRA, RB1, VEGFA, STAT3, and RUNX1, suggesting that these interactions mediate crosstalk between canonical oncogenic pathways. See Figure 5A for details.

Related Subcelluar Localization:

  
Subcelluar Localization RLID Link to RNALocate
Nucleus RLID00040918 Link to RNALocate
Cytoplasm RLID00040919 Link to RNALocate
chromatin RLID00111133 Link to RNALocate
cytosol RLID00111134 Link to RNALocate
cytosol RLID00111135 Link to RNALocate
membrane RLID00111136 Link to RNALocate
nucleolus RLID00111137 Link to RNALocate
nucleoplasm RLID00111138 Link to RNALocate
nucleus RLID00111139 Link to RNALocate
nucleus RLID00111140 Link to RNALocate
exosome RLID00111141 Link to RNALocate
Cytosol RLID00024950 Link to RNALocate

Related Diseases:

  
OMIM Phenotype Phenotype MIM number Link to OMIM
Platelet disorder, familial, with associated myeloid malignancy OMIM:601399 Link to OMIM
Leukemia, acute myeloid OMIM:601626 Link to OMIM

Related Interactions:

  

  

   Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).