Basic Information:

  VIRBase ID:  

VHID00702561

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:  MIMAT0006017          TNF:  NM_000594     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-3p	TNF
miRBase Accession/Entrez ID	MIMAT0006017	7124
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DIF//TNF-alpha//TNFA//TNFSF2//TNLG1F

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TNF	chr6:31543363-31543364(+) m6A 5'UTR       - chr6:31543373-31543374(+) m6A 5'UTR       - chr6:31543403-31543404(+) m6A 5'UTR       - chr6:31543416-31543417(+) m6A 5'UTR       - chr6:31543513-31543514(+) m6A 5'UTR       - chr6:31545104-31545105(+) m6A CDS       26404942 chr6:31545152-31545153(+) m6A CDS       26404942 chr6:31545323-31545324(+) m6A 3'UTR       26404942 chr6:31545382-31545383(+) m6A 3'UTR       26404942 chr6:31545434-31545435(+) m6A 3'UTR       26404942 chr6:31545447-31545448(+) m6A 3'UTR       26404942 chr6:31545462-31545463(+) m6A 3'UTR       26404942 chr6:31545476-31545477(+) m6A 3'UTR       26404942 chr6:31545537-31545538(+) m6A 3'UTR       26404942 chr6:31545552-31545553(+) m6A 3'UTR       26404942 chr6:31545599-31545600(+) m6A 3'UTR       26404942 chr6:31545636-31545637(+) m6A 3'UTR       26404942 chr6:31545646-31545647(+) m6A 3'UTR       26404942 chr6:31545673-31545674(+) m6A 3'UTR       26404942 chr6:31545706-31545707(+) m6A 3'UTR       26404942 chr6:31545717-31545718(+) m6A 3'UTR       26404942 chr6:31545833-31545834(+) m6A 3'UTR       26404942 chr6:31545851-31545852(+) m6A 3'UTR       26404942 chr6:31545879-31545880(+) m6A 3'UTR       26404942 chr6:31545906-31545907(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TNF	Exosome Blood     - Polysome HeLa cells     26000482

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-TAR-3p	l-685,458       5479543 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-3p
Interactor2: TNF

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg