Detail Information

Basic Information:


  VIRBase ID:  

VHID00314073

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-5p:           GPATCH8:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART6-5p GPATCH8
miRBase
Accession/Entrez ID
MIMAT0003414 23131
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - GPATC8//KIAA0553

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GPATCH8
chr17:42523051(-) A-I      intronic
chr17:42523379(-) A-I      intronic
chr17:42481742(-) A-I      intronic
chr17:42481756(-) A-I      intronic
chr17:42481757(-) A-I      intronic
chr17:42512946(-) A-I      intronic
chr17:42512978(-) A-I      intronic
chr17:42512983(-) A-I      intronic
chr17:42481790(-) A-I      intronic
chr17:42513004(-) A-I      intronic
chr17:42513012(-) A-I      intronic
chr17:42520003(-) A-I      intronic
chr17:42520026(-) A-I      intronic
chr17:42520027(-) A-I      intronic
chr17:42520066(-) A-I      intronic
chr17:42566263(-) A-I      intronic
chr17:42566229(-) A-I      intronic
chr17:42529373(-) A-I      intronic
chr17:42481760(-) A-I      intronic
chr17:42512844(-) A-I      intronic
chr17:42481796(-) A-I      intronic
chr17:42512998(-) A-I      intronic
chr17:42481800(-) A-I      intronic
chr17:42536119(-) A-I      intronic
chr17:42520078(-) A-I      intronic
chr17:42520070(-) A-I      intronic
chr17:42523380(-) A-I      intronic
chr17:42481802(-) A-I      intronic
chr17:42512867(-) A-I      intronic
chr17:42523392(-) A-I      intronic
chr17:42523400(-) A-I      intronic
chr17:42529445(-) A-I      intronic
chr17:42513003(-) A-I      intronic
chr17:42534407(-) A-I      intronic
chr17:42533929(-) A-I      intronic
chr17:42512829(-) A-I      intronic
chr17:42529427(-) A-I      intronic
chr17:42534363(-) A-I      intronic
chr17:42534410(-) A-I      intronic
chr17:42512871(-) A-I      intronic
chr17:42535409(-) A-I      intronic
chr17:42521958(-) A-I      intronic
chr17:42520318(-) A-I      intronic
chr17:42520323(-) A-I      intronic
chr17:42522011(-) A-I      intronic
chr17:42523041(-) A-I      intronic
chr17:42523042(-) A-I      intronic
chr17:42523050(-) A-I      intronic
chr17:42533396(-) A-I      intronic
chr17:42533342(-) A-I      intronic
chr17:42533284(-) A-I      intronic
chr17:42533227(-) A-I      intronic
chr17:42533208(-) A-I      intronic
chr17:42533192(-) A-I      intronic
chr17:42532769(-) A-I      intronic
chr17:42498845(-) A-I      intronic
chr17:42498386(-) A-I      intronic
chr17:42498379(-) A-I      intronic
chr17:42498296(-) A-I      intronic
chr17:42532757(-) A-I      intronic
chr17:42532678(-) A-I      intronic
chr17:42532653(-) A-I      intronic
chr17:42532640(-) A-I      intronic
chr17:42532041(-) A-I      intronic
chr17:42531652(-) A-I      intronic
chr17:42531192(-) A-I      intronic
chr17:42568773(-) A-I      intronic
chr17:42568774(-) A-I      intronic
chr17:42568780(-) A-I      intronic
chr17:42531166(-) A-I      intronic
chr17:42568977(-) A-I      intronic
chr17:42569023(-) A-I      intronic
chr17:42569110(-) A-I      intronic
chr17:42569778(-) A-I      intronic
chr17:42570506(-) A-I      intronic
chr17:42570532(-) A-I      intronic
chr17:42570588(-) A-I      intronic
chr17:42531127(-) A-I      intronic
chr17:42531078(-) A-I      intronic
chr17:42531057(-) A-I      intronic
chr17:42531031(-) A-I      intronic
chr17:42480626(-) A-I      intronic
chr17:42558448(-) A-I      intronic
chr17:42558461(-) A-I      intronic
chr17:42558474(-) A-I      intronic
chr17:42530934(-) A-I      intronic
chr17:42558475(-) A-I      intronic
chr17:42559475(-) A-I      intronic
chr17:42559774(-) A-I      intronic
chr17:42559859(-) A-I      intronic
chr17:42560730(-) A-I      intronic
chr17:42560747(-) A-I      intronic
chr17:42560814(-) A-I      intronic
chr17:42561242(-) A-I      intronic
chr17:42561267(-) A-I      intronic
chr17:42561272(-) A-I      intronic
chr17:42561306(-) A-I      intronic
chr17:42561307(-) A-I      intronic
chr17:42561325(-) A-I      intronic
chr17:42561338(-) A-I      intronic
chr17:42561374(-) A-I      intronic
chr17:42561409(-) A-I      intronic
chr17:42561413(-) A-I      intronic
chr17:42561625(-) A-I      intronic
chr17:42561631(-) A-I      intronic
chr17:42561633(-) A-I      intronic
chr17:42562731(-) A-I      intronic
chr17:42565985(-) A-I      intronic
chr17:42566018(-) A-I      intronic
chr17:42566250(-) A-I      intronic
chr17:42566272(-) A-I      intronic
chr17:42566275(-) A-I      intronic
chr17:42566365(-) A-I      intronic
chr17:42566777(-) A-I      intronic
chr17:42566781(-) A-I      intronic
chr17:42566825(-) A-I      intronic
chr17:42566878(-) A-I      intronic
chr17:42566879(-) A-I      intronic
chr17:42566886(-) A-I      intronic
chr17:42566989(-) A-I      intronic
chr17:42524556(-) A-I      intronic
chr17:42568685(-) A-I      intronic
chr17:42521284(-) A-I      intronic
chr17:42521314(-) A-I      intronic
chr17:42530417(-) A-I      intronic
chr17:42530334(-) A-I      intronic
chr17:42530269(-) A-I      intronic
chr17:42480623(-) A-I      intronic
chr17:42479264(-) A-I      intronic
chr17:42479263(-) A-I      intronic
chr17:42479250(-) A-I      intronic
chr17:42529554(-) A-I      intronic
chr17:42529532(-) A-I      intronic
chr17:42529529(-) A-I      intronic
chr17:42529418(-) A-I      intronic
chr17:42528722(-) A-I      intronic
chr17:42526563(-) A-I      intronic
chr17:42479209(-) A-I      intronic
chr17:42572671(-) A-I      intronic
chr17:42572650(-) A-I      intronic
chr17:42570656(-) A-I      intronic
chr17:42570624(-) A-I      intronic
chr17:42570622(-) A-I      intronic
chr17:42568717(-) A-I      intronic
chr17:42526558(-) A-I      intronic
chr17:42526533(-) A-I      intronic
chr17:42540106(-) A-I      intronic
chr17:42540094(-) A-I      intronic
chr17:42479180(-) A-I      intronic
chr17:42539286(-) A-I      intronic
chr17:42538834(-) A-I      intronic
chr17:42526488(-) A-I      intronic
chr17:42526418(-) A-I      intronic
chr17:42526408(-) A-I      intronic
chr17:42526371(-) A-I      intronic
chr17:42525760(-) A-I      intronic
chr17:42521333(-) A-I      intronic
chr17:42489676(-) A-I      intronic
chr17:42525754(-) A-I      intronic
chr17:42489429(-) A-I      intronic
chr17:42483147(-) A-I      intronic
chr17:42538819(-) A-I      intronic
chr17:42538798(-) A-I      intronic
chr17:42538795(-) A-I      intronic
chr17:42538789(-) A-I      intronic
chr17:42538784(-) A-I      intronic
chr17:42538708(-) A-I      intronic
chr17:42538607(-) A-I      intronic
chr17:42538602(-) A-I      intronic
chr17:42540197(-) A-I      intronic
chr17:42540240(-) A-I      intronic
chr17:42540555(-) A-I      intronic
chr17:42540851(-) A-I      intronic
chr17:42536164(-) A-I      intronic
chr17:42552521(-) A-I      intronic
chr17:42553159(-) A-I      intronic
chr17:42524798(-) A-I      intronic
chr17:42521896(-) A-I      intronic
chr17:42553273(-) A-I      intronic
chr17:42521977(-) A-I      intronic
chr17:42553275(-) A-I      intronic
chr17:42553395(-) A-I      intronic
chr17:42553658(-) A-I      intronic
chr17:42553776(-) A-I      intronic
chr17:42553846(-) A-I      intronic
chr17:42555346(-) A-I      intronic
chr17:42555788(-) A-I      intronic
chr17:42555969(-) A-I      intronic
chr17:42556155(-) A-I      intronic
chr17:42556235(-) A-I      intronic
chr17:42556274(-) A-I      intronic
chr17:42557963(-) A-I      intronic
chr17:42521984(-) A-I      intronic
chr17:42522079(-) A-I      intronic
chr17:42557964(-) A-I      intronic
chr17:42557988(-) A-I      intronic
chr17:42536156(-) A-I      intronic
chr17:42536110(-) A-I      intronic
chr17:42536012(-) A-I      intronic
chr17:42535972(-) A-I      intronic
chr17:42535955(-) A-I      intronic
chr17:42535925(-) A-I      intronic
chr17:42535557(-) A-I      intronic
chr17:42535384(-) A-I      intronic
chr17:42535353(-) A-I      intronic
chr17:42534487(-) A-I      intronic
chr17:42534450(-) A-I      intronic
chr17:42558006(-) A-I      intronic
chr17:42523077(-) A-I      intronic
chr17:42558139(-) A-I      intronic
chr17:42558443(-) A-I      intronic
chr17:42534449(-) A-I      intronic
chr17:42534444(-) A-I      intronic
chr17:42521139(-) A-I      intronic
chr17:42520254(-) A-I      intronic
chr17:42519971(-) A-I      intronic
chr17:42534359(-) A-I      intronic
chr17:42517920(-) A-I      intronic
chr17:42517914(-) A-I      intronic
chr17:42512986(-) A-I      intronic
chr17:42512980(-) A-I      intronic
chr17:42523342(-) A-I      intronic
chr17:42512967(-) A-I      intronic
chr17:42512926(-) A-I      intronic
chr17:42523013(-) A-I      intronic
chr17:42523887(-) A-I      intronic
chr17:42512914(-) A-I      intronic
chr17:42512906(-) A-I      intronic
chr17:42534284(-) A-I      intronic
chr17:42512879(-) A-I      intronic
chr17:42512808(-) A-I      intronic
chr17:42522084(-) A-I      intronic
chr17:42522908(-) A-I      intronic
chr17:42522909(-) A-I      intronic
chr17:42522958(-) A-I      intronic
chr17:42523012(-) A-I      intronic
chr17:42479128(-) A-I      intronic
chr17:42479142(-) A-I      intronic
chr17:42479151(-) A-I      intronic
chr17:42524299(-) A-I      intronic
chr17:42524300(-) A-I      intronic
chr17:42524420(-) A-I      intronic
chr17:42524781(-) A-I      intronic
chr17:42524726(-) A-I      intronic
chr17:42524694(-) A-I      intronic
chr17:42524683(-) A-I      intronic
chr17:42524417(-) A-I      intronic
chr17:42510412(-) A-I      intronic
chr17:42510381(-) A-I      intronic
chr17:42510380(-) A-I      intronic
chr17:42510340(-) A-I      intronic
chr17:42483145(-) A-I      intronic
chr17:42483144(-) A-I      intronic
chr17:42483068(-) A-I      intronic
chr17:42509261(-) A-I      intronic
chr17:42509247(-) A-I      intronic
chr17:42509232(-) A-I      intronic
chr17:42509210(-) A-I      intronic
chr17:42483067(-) A-I      intronic
chr17:42483056(-) A-I      intronic
chr17:42483037(-) A-I      intronic
chr17:42483020(-) A-I      intronic
chr17:42483011(-) A-I      intronic
chr17:42482903(-) A-I      intronic
chr17:42482851(-) A-I      intronic
chr17:42481199(-) A-I      intronic
chr17:42481089(-) A-I      intronic
chr17:42480721(-) A-I      intronic
chr17:42480687(-) A-I      intronic
chr17:42480669(-) A-I      intronic
chr17:42509194(-) A-I      intronic
chr17:42509134(-) A-I      intronic
chr17:42509133(-) A-I      intronic
chr17:42509119(-) A-I      intronic
chr17:42509096(-) A-I      intronic
chr17:42509069(-) A-I      intronic
chr17:42507180(-) A-I      intronic
chr17:42506462(-) A-I      intronic
chr17:42506409(-) A-I      intronic
chr17:42506016(-) A-I      intronic
chr17:42505721(-) A-I      intronic
chr17:42505689(-) A-I      intronic
chr17:42505539(-) A-I      intronic
chr17:42505538(-) A-I      intronic
chr17:42505407(-) A-I      intronic
chr17:42533977(-) A-I      intronic
chr17:42500446(-) A-I      intronic
chr17:42498898(-) A-I      intronic
chr17:42498885(-) A-I      intronic
chr17:42498872(-) A-I      intronic
chr17:42513281(-) A-I      intronic
chr17:42517173(-) A-I      intronic
chr17:42513052(-) A-I      intronic
chr17:42513218(-) A-I      intronic
chr17:42513198(-) A-I      intronic
chr17:42513025(-) A-I      intronic
chr17:42513133(-) A-I      intronic
chr17:42513030(-) A-I      intronic
chr17:42513041(-) A-I      intronic
chr17:42513058(-) A-I      intronic
chr17:42521949(-) A-I      intronic
chr17:42517273(-) A-I      intronic
chr17:42517308(-) A-I      intronic
chr17:42513268(-) A-I      intronic
chr17:42532064(-) A-I      intronic
chr17:42513066(-) A-I      intronic
chr17:42517383(-) A-I      intronic
chr17:42552543(-) A-I      intronic
chr17:42513057(-) A-I      intronic
chr17:42507218(-) A-I      intronic
chr17:42513049(-) A-I      intronic
chr17:42572515(-) A-I      intronic
chr17:42513205(-) A-I      intronic
chr17:42479605(-) A-I      intronic
chr17:42569113(-) A-I      intronic
chr17:42517260(-) A-I      intronic
chr17:42513224(-) A-I      intronic
chr17:42513124(-) A-I      intronic
chr17:42513173(-) A-I      intronic
chr17:42513022(-) A-I      intronic
chr17:42513178(-) A-I      intronic
chr17:42513031(-) A-I      intronic
chr17:42535205(-) A-I      intronic
chr17:42508630(-) A-I      intronic
chr17:42517422(-) A-I      intronic
chr17:42521213(-) A-I      intronic
chr17:42566380(-) A-I      intronic
chr17:42529541(-) A-I      intronic
chr17:42517190(-) A-I      intronic
chr17:42493443(-) A-I      intronic
chr17:42517248(-) A-I      intronic
chr17:42536134(-) A-I      intronic
chr17:42513168(-) A-I      intronic
chr17:42533750(-) A-I      intronic
chr17:42573513(-) A-I      intronic
chr17:42517257(-) A-I      intronic
chr17:42513221(-) A-I      intronic
chr17:42573510(-) A-I      intronic
chr17:42511408(-) A-I      intronic
chr17:42499162(-) A-I      intronic
chr17:42560357(-) A-I      intronic
chr17:42500465(-) A-I      intronic
chr17:42519893(-) A-I      intronic
chr17:42533649(-) A-I      intronic
chr17:42523564(-) A-I      intronic
chr17:42522115(-) A-I      intronic
chr17:42539178(-) A-I      intronic
chr17:42540889(-) A-I      intronic
chr17:42531646(-) A-I      intronic
chr17:42535193(-) A-I      intronic
chr17:42529436(-) A-I      intronic
chr17:42567427(-) A-I      intronic
chr17:42571794(-) A-I      intronic
chr17:42570630(-) A-I      intronic
chr17:42559287(-) A-I      intronic
chr17:42522102(-) A-I      intronic
chr17:42530402(-) A-I      intronic
chr17:42555961(-) A-I      intronic
chr17:42518489(-) A-I      intronic
chr17:42573429(-) A-I      intronic
chr17:42521968(-) A-I      intronic
chr17:42525839(-) A-I      intronic
chr17:42539210(-) A-I      intronic
chr17:42499712(-) A-I      intronic
chr17:42517280(-) A-I      intronic
chr17:42560757(-) A-I      intronic
chr17:42530996(-) A-I      intronic
chr17:42520243(-) A-I      intronic
chr17:42534368(-) A-I      intronic
chr17:42518467(-) A-I      intronic
chr17:42535341(-) A-I      intronic
chr17:42513145(-) A-I      intronic
chr17:42531668(-) A-I      intronic
chr17:42540929(-) A-I      intronic
chr17:42525808(-) A-I      intronic
chr17:42534267(-) A-I      intronic
chr17:42507149(-) A-I      intronic
chr17:42500441(-) A-I      intronic
chr17:42512120(-) A-I      intronic
chr17:42567669(-) A-I      intronic
chr17:42563468(-) A-I      intronic
chr17:42517866(-) A-I      intronic
chr17:42489658(-) A-I      intronic
chr17:42533759(-) A-I      intronic
chr17:42522013(-) A-I      intronic
chr17:42532010(-) A-I      intronic
chr17:42513027(-) A-I      intronic
chr17:42530285(-) A-I      intronic
chr17:42539159(-) A-I      intronic
chr17:42493652(-) A-I      intronic
chr17:42538621(-) A-I      intronic
chr17:42540924(-) A-I      intronic
chr17:42525449(-) A-I      intronic
chr17:42518488(-) A-I      intronic
chr17:42536143(-) A-I      intronic
chr17:42540968(-) A-I      intronic
chr17:42535256(-) A-I      intronic
chr17:42533606(-) A-I      intronic
chr17:42534317(-) A-I      intronic
chr17:42532787(-) A-I      intronic
chr17:42528680(-) A-I      intronic
chr17:42555467(-) A-I      intronic
chr17:42533648(-) A-I      intronic
chr17:42528608(-) A-I      intronic
chr17:42531600(-) A-I      intronic
chr17:42517244(-) A-I      intronic
chr17:42529471(-) A-I      intronic
chr17:42522029(-) A-I      intronic
chr17:42517344(-) A-I      intronic
chr17:42499727(-) A-I      intronic
chr17:42528639(-) A-I      intronic
chr17:42524691(-) A-I      intronic
chr17:42525691(-) A-I      intronic
chr17:42523770(-) A-I      intronic
chr17:42567624(-) A-I      intronic
chr17:42536111(-) A-I      intronic
chr17:42519993(-) A-I      intronic
chr17:42517179(-) A-I      intronic
chr17:42539223(-) A-I      intronic
chr17:42523535(-) A-I      intronic
chr17:42513185(-) A-I      intronic
chr17:42532037(-) A-I      intronic
chr17:42566370(-) A-I      intronic
chr17:42555348(-) A-I      intronic
chr17:42522006(-) A-I      intronic
chr17:42507175(-) A-I      intronic
chr17:42553640(-) A-I      intronic
chr17:42524476(-) A-I      intronic
chr17:42534369(-) A-I      intronic
chr17:42566776(-) A-I      intronic
chr17:42567675(-) A-I      intronic
chr17:42529459(-) A-I      intronic
chr17:42519344(-) A-I      intronic
chr17:42519045(-) A-I      intronic
chr17:42529473(-) A-I      intronic
chr17:42517263(-) A-I      intronic
chr17:42560661(-) A-I      intronic
chr17:42519863(-) A-I      intronic
chr17:42504516(-) A-I      intronic
chr17:42536054(-) A-I      intronic
chr17:42522032(-) A-I      intronic
chr17:42533757(-) A-I      intronic
chr17:42523056(-) A-I      intronic
chr17:42532707(-) A-I      intronic
chr17:42498571(-) A-I      intronic
chr17:42534434(-) A-I      intronic
chr17:42522962(-) A-I      intronic
chr17:42536018(-) A-I      intronic
chr17:42529447(-) A-I      intronic
chr17:42532040(-) A-I      intronic
chr17:42508148(-) A-I      intronic
chr17:42528645(-) A-I      intronic
chr17:42524341(-) A-I      intronic
chr17:42519352(-) A-I      intronic
chr17:42555974(-) A-I      intronic
chr17:42568602(-) A-I      intronic
chr17:42524367(-) A-I      intronic
chr17:42573308(-) A-I      intronic
chr17:42529555(-) A-I      intronic
chr17:42529394(-) A-I      intronic
chr17:42522078(-) A-I      intronic
chr17:42533212(-) A-I      intronic
chr17:42536118(-) A-I      intronic
chr17:42540577(-) A-I      intronic
chr17:42536028(-) A-I      intronic
chr17:42479291(-) A-I      intronic
chr17:42500452(-) A-I      intronic
chr17:42572619(-) A-I      intronic
chr17:42519957(-) A-I      intronic
chr17:42533946(-) A-I      intronic
chr17:42523346(-) A-I      intronic
chr17:42540969(-) A-I      intronic
chr17:42520189(-) A-I      intronic
chr17:42508659(-) A-I      intronic
chr17:42529382(-) A-I      intronic
chr17:42535220(-) A-I      intronic
chr17:42504474(-) A-I      intronic
chr17:42524558(-) A-I      intronic
chr17:42503035(-) A-I      intronic
chr17:42559716(-) A-I      intronic
chr17:42531710(-) A-I      intronic
chr17:42523932(-) A-I      intronic
chr17:42565876(-) A-I      intronic
chr17:42523690(-) A-I      intronic
chr17:42483005(-) A-I      intronic
chr17:42558505(-) A-I      intronic
chr17:42559885(-) A-I      intronic
chr17:42522108(-) A-I      intronic
chr17:42526562(-) A-I      intronic
chr17:42532042(-) A-I      intronic
chr17:42555826(-) A-I      intronic
chr17:42500552(-) A-I      intronic
chr17:42522019(-) A-I      intronic
chr17:42529456(-) A-I      intronic
chr17:42534323(-) A-I      intronic
chr17:42508298(-) A-I      intronic
chr17:42539314(-) A-I      intronic
chr17:42533707(-) A-I      intronic
chr17:42512106(-) A-I      intronic
chr17:42520099(-) A-I      intronic
chr17:42517316(-) A-I      intronic
chr17:42563345(-) A-I      intronic
chr17:42525408(-) A-I      intronic
chr17:42521152(-) A-I      intronic
chr17:42489636(-) A-I      intronic
chr17:42570625(-) A-I      intronic
chr17:42519942(-) A-I      intronic
chr17:42500461(-) A-I      intronic
chr17:42530293(-) A-I      intronic
chr17:42520337(-) A-I      intronic
chr17:42533960(-) A-I      intronic
chr17:42520105(-) A-I      intronic
chr17:42524615(-) A-I      intronic
chr17:42517284(-) A-I      intronic
chr17:42533756(-) A-I      intronic
chr17:42540561(-) A-I      intronic
chr17:42567426(-) A-I      intronic
chr17:42522916(-) A-I      intronic
chr17:42566310(-) A-I      intronic
chr17:42489563(-) A-I      intronic
chr17:42521175(-) A-I      intronic
chr17:42532747(-) A-I      intronic
chr17:42509296(-) A-I      intronic
chr17:42521283(-) A-I      intronic
chr17:42518412(-) A-I      intronic
chr17:42533730(-) A-I      intronic
chr17:42531065(-) A-I      intronic
chr17:42567614(-) A-I      intronic
chr17:42558351(-) A-I      intronic
chr17:42558472(-) A-I      intronic
chr17:42528641(-) A-I      intronic
chr17:42573519(-) A-I      intronic
chr17:42532867(-) A-I      intronic
chr17:42540953(-) A-I      intronic
chr17:42522966(-) A-I      intronic
chr17:42489822(-) A-I      intronic
chr17:42572700(-) A-I      intronic
chr17:42552665(-) A-I      intronic
chr17:42573464(-) A-I      intronic
chr17:42533292(-) A-I      intronic
chr17:42550111(-) A-I      intronic
chr17:42530428(-) A-I      intronic
chr17:42556331(-) A-I      intronic
chr17:42510379(-) A-I      intronic
chr17:42566873(-) A-I      intronic
chr17:42499192(-) A-I      intronic
chr17:42554874(-) A-I      intronic
chr17:42479930(-) A-I      intronic
chr17:42531648(-) A-I      intronic
chr17:42572554(-) A-I      intronic
chr17:42570583(-) A-I      intronic
chr17:42521161(-) A-I      intronic
chr17:42566238(-) A-I      intronic
chr17:42521261(-) A-I      intronic
chr17:42529558(-) A-I      intronic
chr17:42535029(-) A-I      intronic
chr17:42532072(-) A-I      intronic
chr17:42523597(-) A-I      intronic
chr17:42540915(-) A-I      intronic
chr17:42535497(-) A-I      intronic
chr17:42532861(-) A-I      intronic
chr17:42530360(-) A-I      intronic
chr17:42519941(-) A-I      intronic
chr17:42532829(-) A-I      intronic
chr17:42489528(-) A-I      intronic
chr17:42523446(-) A-I      intronic
chr17:42540085(-) A-I      intronic
chr17:42509294(-) A-I      intronic
chr17:42533696(-) A-I      intronic
chr17:42535567(-) A-I      intronic
chr17:42536022(-) A-I      intronic
chr17:42523591(-) A-I      intronic
chr17:42555988(-) A-I      intronic
chr17:42503783(-) A-I      intronic
chr17:42558095(-) A-I      intronic
chr17:42524327(-) A-I      intronic
chr17:42533294(-) A-I      intronic
chr17:42508620(-) A-I      intronic
chr17:42522946(-) A-I      intronic
chr17:42571703(-) A-I      intronic
chr17:42532826(-) A-I      intronic
chr17:42521129(-) A-I      intronic
chr17:42523098(-) A-I      intronic
chr17:42523068(-) A-I      intronic
chr17:42525463(-) A-I      intronic
chr17:42519234(-) A-I      intronic
chr17:42567631(-) A-I      intronic
chr17:42558423(-) A-I      intronic
chr17:42555915(-) A-I      intronic
chr17:42559757(-) A-I      intronic
chr17:42526447(-) A-I      intronic
chr17:42540341(-) A-I      intronic
chr17:42566289(-) A-I      intronic
chr17:42569100(-) A-I      intronic
chr17:42525476(-) A-I      intronic
chr17:42526409(-) A-I      intronic
chr17:42555413(-) A-I      intronic
chr17:42559820(-) A-I      intronic
chr17:42498424(-) A-I      intronic
chr17:42504637(-) A-I      intronic
chr17:42518371(-) A-I      intronic
chr17:42563365(-) A-I      intronic
chr17:42520251(-) A-I      intronic
chr17:42523871(-) A-I      intronic
chr17:42538779(-) A-I      intronic
chr17:42535583(-) A-I      intronic
chr17:42499102(-) A-I      intronic
chr17:42553711(-) A-I      intronic
chr17:42518343(-) A-I      intronic
chr17:42528707(-) A-I      intronic
chr17:42520424(-) A-I      intronic
chr17:42528698(-) A-I      intronic
chr17:42540823(-) A-I      intronic
chr17:42529417(-) A-I      intronic
chr17:42533288(-) A-I      intronic
chr17:42535979(-) A-I      intronic
chr17:42509182(-) A-I      intronic
chr17:42573400(-) A-I      intronic
chr17:42555931(-) A-I      intronic
chr17:42533945(-) A-I      intronic
chr17:42560621(-) A-I      intronic
chr17:42517348(-) A-I      intronic
chr17:42569756(-) A-I      intronic
chr17:42535085(-) A-I      intronic
chr17:42523933(-) A-I      intronic
chr17:42523386(-) A-I      intronic
chr17:42566801(-) A-I      intronic
chr17:42533297(-) A-I      intronic
chr17:42540191(-) A-I      intronic
chr17:42556181(-) A-I      intronic
chr17:42525423(-) A-I      intronic
chr17:42558049(-) A-I      intronic
chr17:42520111(-) A-I      intronic
chr17:42513282(-) A-I      intronic
chr17:42547586(-) A-I      intronic
chr17:42521254(-) A-I      intronic
chr17:42529395(-) A-I      intronic
chr17:42531659(-) A-I      intronic
chr17:42558433(-) A-I      intronic
chr17:42525708(-) A-I      intronic
chr17:42521337(-) A-I      intronic
chr17:42566020(-) A-I      intronic
chr17:42540911(-) A-I      intronic
chr17:42479127(-) A-I      intronic
chr17:42500392(-) A-I      intronic
chr17:42526536(-) A-I      intronic
chr17:42552695(-) A-I      intronic
chr17:42523163(-) A-I      intronic
chr17:42493616(-) A-I      intronic
chr17:42520280(-) A-I      intronic
chr17:42573360(-) A-I      intronic
chr17:42499688(-) A-I      intronic
chr17:42533920(-) A-I      intronic
chr17:42520104(-) A-I      intronic
chr17:42520229(-) A-I      intronic
chr17:42535282(-) A-I      intronic
chr17:42533690(-) A-I      intronic
chr17:42535942(-) A-I      intronic
chr17:42505529(-) A-I      intronic
chr17:42539151(-) A-I      intronic
chr17:42512118(-) A-I      intronic
chr17:42540161(-) A-I      intronic
chr17:42520261(-) A-I      intronic
chr17:42512115(-) A-I      intronic
chr17:42519911(-) A-I      intronic
chr17:42534435(-) A-I      intronic
chr17:42489633(-) A-I      intronic
chr17:42524665(-) A-I      intronic
chr17:42523542(-) A-I      intronic
chr17:42531690(-) A-I      intronic
chr17:42504522(-) A-I      intronic
chr17:42545440(-) A-I      intronic
chr17:42525106(-) A-I      intronic
chr17:42529559(-) A-I      intronic
chr17:42520034(-) A-I      intronic
chr17:42558005(-) A-I      intronic
chr17:42521923(-) A-I      intronic
chr17:42517326(-) A-I      intronic
chr17:42521293(-) A-I      intronic
chr17:42522911(-) A-I      intronic
chr17:42523926(-) A-I      intronic
chr17:42531586(-) A-I      intronic
chr17:42566413(-) A-I      intronic
chr17:42535329(-) A-I      intronic
chr17:42530982(-) A-I      intronic
chr17:42533623(-) A-I      intronic
chr17:42528565(-) A-I      intronic
chr17:42540534(-) A-I      intronic
chr17:42568978(-) A-I      intronic
chr17:42531764(-) A-I      intronic
chr17:42565397(-) A-I      intronic
chr17:42518316(-) A-I      intronic
chr17:42559777(-) A-I      intronic
chr17:42489269(-) A-I      intronic
chr17:42528540(-) A-I      intronic
chr17:42535507(-) A-I      intronic
chr17:42568971(-) A-I      intronic
chr17:42531550(-) A-I      intronic
chr17:42491057(-) A-I      intronic
chr17:42503065(-) A-I      intronic
chr17:42541020(-) A-I      intronic
chr17:42526523(-) A-I      intronic
chr17:42540994(-) A-I      intronic
chr17:42526427(-) A-I      intronic
chr17:42518445(-) A-I      intronic
chr17:42505483(-) A-I      intronic
chr17:42565829(-) A-I      intronic
chr17:42509234(-) A-I      intronic
chr17:42524608(-) A-I      intronic
chr17:42559842(-) A-I      intronic
chr17:42523833(-) A-I      intronic
chr17:42566426(-) A-I      intronic
chr17:42536083(-) A-I      intronic
chr17:42524651(-) A-I      intronic
chr17:42489564(-) A-I      intronic
chr17:42520065(-) A-I      intronic
chr17:42521292(-) A-I      intronic
chr17:42521201(-) A-I      intronic
chr17:42520036(-) A-I      intronic
chr17:42489703(-) A-I      intronic
chr17:42508149(-) A-I      intronic
chr17:42561161(-) A-I      intronic
chr17:42523534(-) A-I      intronic
chr17:42567494(-) A-I      intronic
chr17:42503096(-) A-I      intronic
chr17:42506071(-) A-I      intronic
chr17:42526478(-) A-I      intronic
chr17:42559324(-) A-I      intronic
chr17:42571071(-) A-I      intronic
chr17:42517290(-) A-I      intronic
chr17:42528618(-) A-I      intronic
chr17:42536011(-) A-I      intronic
chr17:42531049(-) A-I      intronic
chr17:42500581(-) A-I      intronic
chr17:42518357(-) A-I      intronic
chr17:42506121(-) A-I      intronic
chr17:42521330(-) A-I      intronic
chr17:42522999(-) A-I      intronic
chr17:42506089(-) A-I      intronic
chr17:42479115(-) A-I      intronic
chr17:42523870(-) A-I      intronic
chr17:42489893(-) A-I      intronic
chr17:42523811(-) A-I      intronic
chr17:42525111(-) A-I      intronic
chr17:42540869(-) A-I      intronic
chr17:42555949(-) A-I      intronic
chr17:42529517(-) A-I      intronic
chr17:42521920(-) A-I      intronic
chr17:42518413(-) A-I      intronic
chr17:42533613(-) A-I      intronic
chr17:42559748(-) A-I      intronic
chr17:42558376(-) A-I      intronic
chr17:42532786(-) A-I      intronic
chr17:42572590(-) A-I      intronic
chr17:42524675(-) A-I      intronic
chr17:42496000(-) A-I      intronic
chr17:42565649(-) A-I      intronic
chr17:42489243(-) A-I      intronic
chr17:42510376(-) A-I      intronic
chr17:42533947(-) A-I      intronic
chr17:42559909(-) A-I      intronic
chr17:42502989(-) A-I      intronic
chr17:42517349(-) A-I      intronic
chr17:42570839(-) A-I      intronic
chr17:42521924(-) A-I      intronic
chr17:42532018(-) A-I      intronic
chr17:42567564(-) A-I      intronic
chr17:42534919(-) A-I      intronic
chr17:42500497(-) A-I      intronic
chr17:42533348(-) A-I      intronic
chr17:42513278(-) A-I      intronic
chr17:42522017(-) A-I      intronic
chr17:42565875(-) A-I      intronic
chr17:42526481(-) A-I      intronic
chr17:42525773(-) A-I      intronic
chr17:42479200(-) A-I      intronic
chr17:42530451(-) A-I      intronic
chr17:42539276(-) A-I      intronic
chr17:42523432(-) A-I      intronic
chr17:42533559(-) A-I      intronic
chr17:42517364(-) A-I      intronic
chr17:42536185(-) A-I      intronic
chr17:42523101(-) A-I      intronic
chr17:42524797(-) A-I      intronic
chr17:42523678(-) A-I      intronic
chr17:42568749(-) A-I      intronic
chr17:42498257(-) A-I      intronic
chr17:42567674(-) A-I      intronic
chr17:42539116(-) A-I      intronic
chr17:42565907(-) A-I      intronic
chr17:42500557(-) A-I      intronic
chr17:42529501(-) A-I      intronic
chr17:42509185(-) A-I      intronic
chr17:42531099(-) A-I      intronic
chr17:42555458(-) A-I      intronic
chr17:42552490(-) A-I      intronic
chr17:42533172(-) A-I      intronic
chr17:42554859(-) A-I      intronic
chr17:42573341(-) A-I      intronic
chr17:42523053(-) A-I      intronic
chr17:42522058(-) A-I      intronic
chr17:42540560(-) A-I      intronic
chr17:42558375(-) A-I      intronic
chr17:42524314(-) A-I      intronic
chr17:42508135(-) A-I      intronic
chr17:42523067(-) A-I      intronic
chr17:42522065(-) A-I      intronic
chr17:42540852(-) A-I      intronic
chr17:42535519(-) A-I      intronic
chr17:42525133(-) A-I      intronic
chr17:42534355(-) A-I      intronic
chr17:42531737(-) A-I      intronic
chr17:42538807(-) A-I      intronic
chr17:42566332(-) A-I      intronic
chr17:42479612(-) A-I      intronic
chr17:42540318(-) A-I      intronic
chr17:42535572(-) A-I      intronic
chr17:42505482(-) A-I      intronic
chr17:42573301(-) A-I      intronic
chr17:42523019(-) A-I      intronic
chr17:42556023(-) A-I      intronic
chr17:42529578(-) A-I      intronic
chr17:42521134(-) A-I      intronic
chr17:42519140(-) A-I      intronic
chr17:42559825(-) A-I      intronic
chr17:42523745(-) A-I      intronic
chr17:42523590(-) A-I      intronic
chr17:42535128(-) A-I      intronic
chr17:42528679(-) A-I      intronic
chr17:42475813(-) A-I      NonSyn:Lys->Arg
chr17:42489698(-) A-I      intronic
chr17:42573474(-) A-I      intronic
chr17:42562525(-) A-I      intronic
chr17:42535495(-) A-I      intronic
chr17:42529519(-) A-I      intronic
chr17:42566364(-) A-I      intronic
chr17:42539068(-) A-I      intronic
chr17:42479206(-) A-I      intronic
chr17:42499277(-) A-I      intronic
chr17:42507155(-) A-I      intronic
chr17:42518420(-) A-I      intronic
chr17:42518334(-) A-I      intronic
chr17:42524483(-) A-I      intronic
chr17:42528733(-) A-I      intronic
chr17:42523472(-) A-I      intronic
chr17:42561392(-) A-I      intronic
chr17:42523786(-) A-I      intronic
chr17:42521315(-) A-I      intronic
chr17:42523920(-) A-I      intronic
chr17:42534458(-) A-I      intronic
chr17:42524238(-) A-I      intronic
chr17:42565429(-) A-I      intronic
chr17:42509237(-) A-I      intronic
chr17:42561148(-) A-I      intronic
chr17:42489675(-) A-I      intronic
chr17:42555426(-) A-I      intronic
chr17:42528554(-) A-I      intronic
chr17:42533899(-) A-I      intronic
chr17:42535536(-) A-I      intronic
chr17:42538824(-) A-I      intronic
chr17:42527170(-) A-I      intronic
chr17:42540944(-) A-I      intronic
chr17:42519997(-) A-I      intronic
chr17:42531742(-) A-I      intronic
chr17:42520274(-) A-I      intronic
chr17:42526433(-) A-I      intronic
chr17:42531064(-) A-I      intronic
chr17:42570593(-) A-I      intronic
chr17:42552584(-) A-I      intronic
chr17:42565802(-) A-I      intronic
chr17:42518317(-) A-I      intronic
chr17:42500127(-) A-I      intronic
chr17:42509242(-) A-I      intronic
chr17:42532613(-) A-I      intronic
chr17:42518284(-) A-I      intronic
chr17:42520002(-) A-I      intronic
chr17:42531616(-) A-I      intronic
chr17:42570513(-) A-I      intronic
chr17:42535982(-) A-I      intronic
chr17:42500526(-) A-I      intronic
chr17:42523037(-) A-I      intronic
chr17:42526400(-) A-I      intronic
chr17:42490674(-) A-I      intronic
chr17:42520305(-) A-I      intronic
chr17:42520040(-) A-I      intronic
chr17:42519939(-) A-I      intronic
chr17:42500487(-) A-I      intronic
chr17:42521884(-) A-I      intronic
chr17:42512836(-) A-I      intronic
chr17:42508029(-) A-I      intronic
chr17:42517886(-) A-I      intronic
chr17:42533692(-) A-I      intronic
chr17:42563355(-) A-I      intronic
chr17:42522033(-) A-I      intronic
chr17:42524340(-) A-I      intronic
chr17:42523876(-) A-I      intronic
chr17:42573415(-) A-I      intronic
chr17:42559406(-) A-I      intronic
chr17:42503004(-) A-I      intronic
chr17:42510377(-) A-I      intronic
chr17:42568735(-) A-I      intronic
chr17:42538688(-) A-I      intronic
chr17:42530397(-) A-I      intronic
chr17:42522041(-) A-I      intronic
chr17:42518381(-) A-I      intronic
chr17:42540844(-) A-I      intronic
chr17:42530107(-) A-I      intronic
chr17:42524634(-) A-I      intronic
chr17:42529524(-) A-I      intronic
chr17:42492699(-) A-I      intronic
chr17:42564779(-) A-I      intronic
chr17:42556281(-) A-I      intronic
chr17:42523767(-) A-I      intronic
chr17:42521157(-) A-I      intronic
chr17:42523381(-) A-I      intronic
chr17:42517324(-) A-I      intronic
chr17:42567011(-) A-I      intronic
chr17:42500407(-) A-I      intronic
chr17:42545877(-) A-I      intronic
chr17:42506848(-) A-I      intronic
chr17:42479917(-) A-I      intronic
chr17:42524804(-) A-I      intronic
chr17:42567607(-) A-I      intronic
chr17:42498987(-) A-I      intronic
chr17:42521979(-) A-I      intronic
chr17:42524270(-) A-I      intronic
chr17:42568810(-) A-I      intronic
chr17:42563427(-) A-I      intronic
chr17:42526791(-) A-I      intronic
chr17:42531182(-) A-I      intronic
chr17:42530983(-) A-I      intronic
chr17:42510349(-) A-I      intronic
chr17:42503037(-) A-I      intronic
chr17:42529374(-) A-I      intronic
chr17:42523007(-) A-I      intronic
chr17:42563323(-) A-I      intronic
chr17:42535072(-) A-I      intronic
chr17:42510346(-) A-I      intronic
chr17:42540183(-) A-I      intronic
chr17:42573274(-) A-I      intronic
chr17:42526472(-) A-I      intronic
chr17:42520439(-) A-I      intronic
chr17:42507132(-) A-I      intronic
chr17:42555421(-) A-I      intronic
chr17:42533285(-) A-I      intronic
chr17:42479986(-) A-I      intronic
chr17:42559760(-) A-I      intronic
chr17:42503814(-) A-I      intronic
chr17:42517865(-) A-I      intronic
chr17:42521291(-) A-I      intronic
chr17:42523821(-) A-I      intronic
chr17:42540930(-) A-I      intronic
chr17:42520309(-) A-I      intronic
chr17:42520201(-) A-I      intronic
chr17:42535260(-) A-I      intronic
chr17:42523105(-) A-I      intronic
chr17:42573374(-) A-I      intronic
chr17:42521267(-) A-I      intronic
chr17:42573440(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GPATCH8
chr17:42513022(-) A-I intron -    22028664
chr17:42513025(-) A-I intron -    22028664
chr17:42513027(-) A-I intron -    22028664
chr17:42513030(-) A-I intron -    22028664
chr17:42513031(-) A-I intron -    22028664
chr17:42513041(-) A-I intron -    22028664
chr17:42513049(-) A-I intron -    22028664
chr17:42513052(-) A-I intron -    22028664
chr17:42513057(-) A-I intron -    22028664
chr17:42513058(-) A-I intron -    22028664
chr17:42513066(-) A-I intron -    22028664
chr17:42513124(-) A-I intron -    22028664
chr17:42513133(-) A-I intron -    22028664
chr17:42513145(-) A-I intron -    22028664
chr17:42513168(-) A-I intron -    22028664
chr17:42513173(-) A-I intron -    22028664
chr17:42513178(-) A-I intron -    22028664
chr17:42513185(-) A-I intron -    22028664
chr17:42513198(-) A-I intron -    22028664
chr17:42513205(-) A-I intron -    22028664
chr17:42513218(-) A-I intron -    22028664
chr17:42513221(-) A-I intron -    22028664
chr17:42513224(-) A-I intron -    22028664
chr17:42513268(-) A-I intron -    22028664
chr17:42513278(-) A-I intron -    22028664
chr17:42513281(-) A-I intron -    22028664
chr17:42513282(-) A-I intron -    22028664
chr17:42517173(-) A-I intron -    22028664
chr17:42517190(-) A-I intron -    22028664
chr17:42517244(-) A-I intron -    22028664
chr17:42517248(-) A-I intron -    22028664
chr17:42517257(-) A-I intron -    22028664
chr17:42517260(-) A-I intron -    22028664
chr17:42517263(-) A-I intron -    22028664
chr17:42517273(-) A-I intron -    22028664
chr17:42517280(-) A-I intron -    22028664
chr17:42517308(-) A-I intron -    22028664
chr17:42517324(-) A-I intron -    22028664
chr17:42517326(-) A-I intron -    22028664
chr17:42517344(-) A-I intron -    22028664
chr17:42517364(-) A-I intron -    22028664
chr17:42517383(-) A-I intron -    22028664
chr17:42521257(-) A-I intron -    21960545
chr17:42522102(-) A-I intron -    21960545
chr17:42523012(-) A-I intron -    21960545
chr17:42530428(-) A-I intron -    21960545
chr17:42531174(-) A-I intron -    21960545
chr17:42531710(-) A-I intron -    21960545
chr17:42532018(-) A-I intron -    21960545
chr17:42532072(-) A-I intron -    21960545
chr17:42533692(-) A-I intron -    21960545
chr17:42533696(-) A-I intron -    21960545
chr17:42533977(-) A-I intron -    21960545
chr17:42554891(-) A-I intron -    21960545
chr17:42568971(-) A-I intron -    21960545
chr17:42509234(-) A-G intron -    22484847
chr17:42519993(-) A-G intron -    22484847
chr17:42521283(-) A-G intron -    22484847
chr17:42521291(-) A-G intron -    22484847
chr17:42521292(-) A-G intron -    22484847
chr17:42526791(-) A-G intron -    22484847
chr17:42528565(-) A-G intron -    22484847
chr17:42529473(-) A-G intron -    22484847
chr17:42529524(-) A-G intron -    22484847
chr17:42530360(-) A-G intron -    22484847
chr17:42532072(-) A-G intron -    22484847
chr17:42532613(-) A-G intron -    22484847
chr17:42533759(-) A-G intron -    22484847
chr17:42535519(-) A-G intron -    22484847
chr17:42535536(-) A-G intron -    22484847
chr17:42535583(-) A-G intron -    22484847
chr17:42540318(-) A-G intron -    22484847
chr17:42540560(-) A-G intron -    22484847
chr17:42540561(-) A-G intron -    22484847
chr17:42561350(-) A-G intron -    22484847
chr17:42570583(-) A-G intron -    22484847
chr17:42571703(-) A-G intron -    22484847
chr17:42571794(-) A-G intron -    22484847
chr17:42572554(-) A-G intron -    22484847
chr17:42572619(-) A-G intron -    22484847
chr17:42573360(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GPATCH8
chr17:42472665-42472666(-) m6A exon       27773535
chr17:42472677-42472678(-) m6A exon       27773535
chr17:42472759-42472760(-) m6A exon       27773535
chr17:42472931-42472932(-) m6A exon       24981863//27773535
chr17:42473677-42473678(-) m6A exon       -
chr17:42473685-42473686(-) m6A exon       -
chr17:42474645-42474646(-) m6A exon       27773535
chr17:42474688-42474689(-) m6A exon       27773535
chr17:42474896-42474897(-) m6A 3'UTR//exon       27773535
chr17:42474966-42474967(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535
chr17:42475620-42475621(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:42475692-42475693(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42475737-42475738(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42475833-42475834(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr17:42475852-42475853(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr17:42475915-42475916(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr17:42475925-42475926(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr17:42476070-42476071(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr17:42476129-42476130(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:42476171-42476172(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:42476187-42476188(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:42476193-42476194(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:42476244-42476245(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:42476373-42476374(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:42476472-42476473(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536
chr17:42476684-42476685(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42476700-42476701(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42476789-42476790(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42476808-42476809(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42477077-42477078(-) m6A 3'UTR//CDS//exon       24284625//27773535//27371828//22608085
chr17:42477089-42477090(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr17:42477105-42477106(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr17:42477206-42477207(-) m1A 3'UTR//CDS//exon       26863196
chr17:42477242-42477243(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477248-42477249(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477254-42477255(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477374-42477375(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477386-42477387(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477474-42477475(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477481-42477482(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477516-42477517(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr17:42477642-42477643(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//26404942//27773535//27371828//22608085
chr17:42477671-42477672(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477679-42477680(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477688-42477689(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477702-42477703(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477713-42477714(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477758-42477759(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477782-42477783(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42477851-42477852(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42477857-42477858(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42477898-42477899(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr17:42477931-42477932(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr17:42478019-42478020(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr17:42478042-42478043(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr17:42478075-42478076(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr17:42478190-42478191(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//27371828//22608085
chr17:42478229-42478230(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr17:42478356-42478357(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42478401-42478402(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42478418-42478419(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42478445-42478446(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42478450-42478451(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:42478465-42478466(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085
chr17:42478482-42478483(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr17:42478511-42478512(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr17:42478567-42478568(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085
chr17:42478631-42478632(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//22608085
chr17:42478793-42478794(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828
chr17:42483299-42483300(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828
chr17:42483347-42483348(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828
chr17:42512444-42512445(-) m6A 3'UTR//CDS//exon       24981863
chr17:42512460-42512461(-) m6A 3'UTR//CDS//exon       24981863
chr17:42541882-42541883(-) m6A 3'UTR//CDS//exon       27773535
chr17:42541900-42541901(-) m6A 3'UTR//CDS//exon       27773535
chr17:42580700-42580701(-) m6A CDS//exon       24981863
chr17:42580706-42580707(-) m6A CDS//exon       24981863
chr17:42580730-42580731(-) m6A CDS//exon       24981863
chr17:42580776-42580777(-) m6A exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GPATCH8
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART6-5p
Interactor2: GPATCH8

Evidence Support:


Weak-Evidence PAR-CLIP
Prediction-Evidence miRanda//PARalyzer//Targetscan
Support Database ViRBase//VIRmiRNA//VmiReg

References:


PMID 22100165 Target region 3'UTR
Source ViRBase//VIRmiRNA//VmiReg Interactor1 expression None
Tissue or cell line BC-1 cells Interactor2 expression None
Description Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.

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