Basic Information
| RNALocate ID: | RLID:00008219 |
| RNA Symbol: | GPATCH8 |
| Localization: | Cytosol |
RNA Information
| RNA Name: | GPATCH8 |
| RNA ID: | NCBI:23131|Ensembl:ENSG00000186566 |
| RNA Category: | mRNA |
| Species: | Homo sapiens |
| Alias: | GPATC8|KIAA0553 |
Localization Information
| PubMed ID: | 21613539 |
| Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
| Method: | qRT-PCR |
| Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Other Subcellular Localization
| RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
| RLID:00008218 | Cytoplasm | Nasopharyngeal carcinoma cells | 20498841 |
| RLID:00008220 | Nucleus | Nasopharyngeal carcinoma cells | 20498841 |
| RLID-D:00001702 | Chromatin | K562 cells | |
| RLID-D:00009053 | Cytosol | HCC cell line (HepG2)|K562 cells | |
| RLID-D:00016011 | Membrane | K562 cells | |
| RLID-D:00019802 | Nucleolus | HCC cell line (HepG2)|K562 cells | |
| RLID-D:00026062 | Nucleoplasm | K562 cells | |
| RLID-D:00033935 | Nucleus | HCC cell line (HepG2)|HeLa-S3 cells|K562 cells | |
| RLID-D:10004588 | Exosome | Blood |
RNA Interaction Information
| Resource | RNA Symbol | Species | Link | RNALocate ID |
| RNAInter | SNHG16 | Homo sapiens | RR00632143 |
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