Detail Information

Basic Information:


  VIRBase ID:  

HHID00065564

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-223-5p:           FBXW7:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-223-5p FBXW7
miRBase
Accession/Entrez ID
MIMAT0004570 55294
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - AGO//CDC4//FBW6//FBW7//FBX30//FBXO30//FBXW6//hAgo//hCdc4//SEL-10//SEL10

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-223-5p
rs1240009384 chrX:66018913    A/T
rs1397275461 chrX:66018904    G/T
rs1464475149 chrX:66018916    T/C
rs761701581 chrX:66018906    C/G
rs772305537 chrX:66018909    G/A
rs774279244 chrX:66018895    C/T
rs890919635 chrX:66018896    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FBXW7
chr4:153366938(-) A-I      intronic
chr4:153366918(-) A-I      intronic
chr4:153366181(-) A-I      intronic
chr4:153366171(-) A-I      intronic
chr4:153366154(-) A-I      intronic
chr4:153366153(-) A-I      intronic
chr4:153366151(-) A-I      intronic
chr4:153366143(-) A-I      intronic
chr4:153366078(-) A-I      intronic
chr4:153364401(-) A-I      intronic
chr4:153300767(-) A-I      intronic
chr4:153300111(-) A-I      intronic
chr4:153300058(-) A-I      intronic
chr4:153278768(-) A-I      intronic
chr4:153278637(-) A-I      intronic
chr4:153278605(-) A-I      intronic
chr4:153278548(-) A-I      intronic
chr4:153347681(-) A-I      intronic
chr4:153347613(-) A-I      intronic
chr4:153424520(-) A-I      intronic
chr4:153448875(-) A-I      intronic
chr4:153448755(-) A-I      intronic
chr4:153448749(-) A-I      intronic
chr4:153448729(-) A-I      intronic
chr4:153448702(-) A-I      intronic
chr4:153440286(-) A-I      intronic
chr4:153440192(-) A-I      intronic
chr4:153440178(-) A-I      intronic
chr4:153439743(-) A-I      intronic
chr4:153439722(-) A-I      intronic
chr4:153439707(-) A-I      intronic
chr4:153439681(-) A-I      intronic
chr4:153439665(-) A-I      intronic
chr4:153439627(-) A-I      intronic
chr4:153439618(-) A-I      intronic
chr4:153439617(-) A-I      intronic
chr4:153439616(-) A-I      intronic
chr4:153439513(-) A-I      intronic
chr4:153439505(-) A-I      intronic
chr4:153439495(-) A-I      intronic
chr4:153439414(-) A-I      intronic
chr4:153439320(-) A-I      intronic
chr4:153439317(-) A-I      intronic
chr4:153438256(-) A-I      intronic
chr4:153438250(-) A-I      intronic
chr4:153438247(-) A-I      intronic
chr4:153438220(-) A-I      intronic
chr4:153438188(-) A-I      intronic
chr4:153438126(-) A-I      intronic
chr4:153438116(-) A-I      intronic
chr4:153438075(-) A-I      intronic
chr4:153438074(-) A-I      intronic
chr4:153429220(-) A-I      intronic
chr4:153429067(-) A-I      intronic
chr4:153429038(-) A-I      intronic
chr4:153429036(-) A-I      intronic
chr4:153429012(-) A-I      intronic
chr4:153428986(-) A-I      intronic
chr4:153428983(-) A-I      intronic
chr4:153428959(-) A-I      intronic
chr4:153428941(-) A-I      intronic
chr4:153427518(-) A-I      intronic
chr4:153427486(-) A-I      intronic
chr4:153427453(-) A-I      intronic
chr4:153427448(-) A-I      intronic
chr4:153427380(-) A-I      intronic
chr4:153427360(-) A-I      intronic
chr4:153427089(-) A-I      intronic
chr4:153427072(-) A-I      intronic
chr4:153427071(-) A-I      intronic
chr4:153426973(-) A-I      intronic
chr4:153424625(-) A-I      intronic
chr4:153424620(-) A-I      intronic
chr4:153424525(-) A-I      intronic
chr4:153420911(-) A-I      intronic
chr4:153417246(-) A-I      intronic
chr4:153417221(-) A-I      intronic
chr4:153417207(-) A-I      intronic
chr4:153417156(-) A-I      intronic
chr4:153417086(-) A-I      intronic
chr4:153417072(-) A-I      intronic
chr4:153416579(-) A-I      intronic
chr4:153416511(-) A-I      intronic
chr4:153416481(-) A-I      intronic
chr4:153416469(-) A-I      intronic
chr4:153416405(-) A-I      intronic
chr4:153416387(-) A-I      intronic
chr4:153416368(-) A-I      intronic
chr4:153416324(-) A-I      intronic
chr4:153414590(-) A-I      intronic
chr4:153414589(-) A-I      intronic
chr4:153414510(-) A-I      intronic
chr4:153414496(-) A-I      intronic
chr4:153414477(-) A-I      intronic
chr4:153414432(-) A-I      intronic
chr4:153414413(-) A-I      intronic
chr4:153396535(-) A-I      intronic
chr4:153396460(-) A-I      intronic
chr4:153396422(-) A-I      intronic
chr4:153396171(-) A-I      intronic
chr4:153396089(-) A-I      intronic
chr4:153396088(-) A-I      intronic
chr4:153396022(-) A-I      intronic
chr4:153396011(-) A-I      intronic
chr4:153395987(-) A-I      intronic
chr4:153395986(-) A-I      intronic
chr4:153395982(-) A-I      intronic
chr4:153395941(-) A-I      intronic
chr4:153395939(-) A-I      intronic
chr4:153395880(-) A-I      intronic
chr4:153394756(-) A-I      intronic
chr4:153394734(-) A-I      intronic
chr4:153384352(-) A-I      intronic
chr4:153340949(-) A-I      intronic
chr4:153342871(-) A-I      intronic
chr4:153343109(-) A-I      intronic
chr4:153384346(-) A-I      intronic
chr4:153384328(-) A-I      intronic
chr4:153384260(-) A-I      intronic
chr4:153384251(-) A-I      intronic
chr4:153384222(-) A-I      intronic
chr4:153379390(-) A-I      intronic
chr4:153379365(-) A-I      intronic
chr4:153379336(-) A-I      intronic
chr4:153379158(-) A-I      intronic
chr4:153378758(-) A-I      intronic
chr4:153378752(-) A-I      intronic
chr4:153378733(-) A-I      intronic
chr4:153378687(-) A-I      intronic
chr4:153378684(-) A-I      intronic
chr4:153378613(-) A-I      intronic
chr4:153367000(-) A-I      intronic
chr4:153366940(-) A-I      intronic
chr4:153439430(-) A-I      intronic
chr4:153374322(-) A-I      intronic
chr4:153345314(-) A-I      intronic
chr4:153379309(-) A-I      intronic
chr4:153440269(-) A-I      intronic
chr4:153440388(-) A-I      intronic
chr4:153379426(-) A-I      intronic
chr4:153414414(-) A-I      intronic
chr4:153379391(-) A-I      intronic
chr4:153439626(-) A-I      intronic
chr4:153384427(-) A-I      intronic
chr4:153280639(-) A-I      intronic
chr4:153424674(-) A-I      intronic
chr4:153424656(-) A-I      intronic
chr4:153366903(-) A-I      intronic
chr4:153439502(-) A-I      intronic
chr4:153417609(-) A-I      intronic
chr4:153328985(-) A-I      intronic
chr4:153429216(-) A-I      intronic
chr4:153424669(-) A-I      intronic
chr4:153416510(-) A-I      intronic
chr4:153440208(-) A-I      intronic
chr4:153439621(-) A-I      intronic
chr4:153439478(-) A-I      intronic
chr4:153366855(-) A-I      intronic
chr4:153396467(-) A-I      intronic
chr4:153366868(-) A-I      intronic
chr4:153427416(-) A-I      intronic
chr4:153278545(-) A-I      intronic
chr4:153417708(-) A-I      intronic
chr4:153278610(-) A-I      intronic
chr4:153366136(-) A-I      intronic
chr4:153326132(-) A-I      intronic
chr4:153439625(-) A-I      intronic
chr4:153428974(-) A-I      intronic
chr4:153347730(-) A-I      intronic
chr4:153366202(-) A-I      intronic
chr4:153438012(-) A-I      intronic
chr4:153347610(-) A-I      intronic
chr4:153429168(-) A-I      intronic
chr4:153414482(-) A-I      intronic
chr4:153443067(-) A-I      intronic
chr4:153395946(-) A-I      intronic
chr4:153299920(-) A-I      intronic
chr4:153414596(-) A-I      intronic
chr4:153443110(-) A-I      intronic
chr4:153439278(-) A-I      intronic
chr4:153448754(-) A-I      intronic
chr4:153448668(-) A-I      intronic
chr4:153394274(-) A-I      intronic
chr4:153429108(-) A-I      intronic
chr4:153416334(-) A-I      intronic
chr4:153394761(-) A-I      intronic
chr4:153417243(-) A-I      intronic
chr4:153260897(-) A-I      intronic
chr4:153406083(-) A-I      intronic
chr4:153417269(-) A-I      intronic
chr4:153440338(-) A-I      intronic
chr4:153342620(-) A-I      intronic
chr4:153440463(-) A-I      intronic
chr4:153366979(-) A-I      intronic
chr4:153414583(-) A-I      intronic
chr4:153395993(-) A-I      intronic
chr4:153443109(-) A-I      intronic
chr4:153439623(-) A-I      intronic
chr4:153379310(-) A-I      intronic
chr4:153448736(-) A-I      intronic
chr4:153382203(-) A-I      intronic
chr4:153347607(-) A-I      intronic
chr4:153427555(-) A-I      intronic
chr4:153427030(-) A-I      intronic
chr4:153395975(-) A-I      intronic
chr4:153300830(-) A-I      intronic
chr4:153417315(-) A-I      intronic
chr4:153429137(-) A-I      intronic
chr4:153439577(-) A-I      intronic
chr4:153395878(-) A-I      intronic
chr4:153364354(-) A-I      intronic
chr4:153429032(-) A-I      intronic
chr4:153427313(-) A-I      intronic
chr4:153394771(-) A-I      intronic
chr4:153394339(-) A-I      intronic
chr4:153424612(-) A-I      intronic
chr4:153440444(-) A-I      intronic
chr4:153374078(-) A-I      intronic
chr4:153414495(-) A-I      intronic
chr4:153451113(-) A-I      intronic
chr4:153366257(-) A-I      intronic
chr4:153428947(-) A-I      intronic
chr4:153440283(-) A-I      intronic
chr4:153347640(-) A-I      intronic
chr4:153440350(-) A-I      intronic
chr4:153427558(-) A-I      intronic
chr4:153440436(-) A-I      intronic
chr4:153379376(-) A-I      intronic
chr4:153366191(-) A-I      intronic
chr4:153439515(-) A-I      intronic
chr4:153359727(-) A-I      intronic
chr4:153300731(-) A-I      intronic
chr4:153366259(-) A-I      intronic
chr4:153394839(-) A-I      intronic
chr4:153326078(-) A-I      intronic
chr4:153329101(-) A-I      intronic
chr4:153427125(-) A-I      intronic
chr4:153396451(-) A-I      intronic
chr4:153432272(-) A-I      intronic
chr4:153439305(-) A-I      intronic
chr4:153396132(-) A-I      intronic
chr4:153439587(-) A-I      intronic
chr4:153429583(-) A-I      intronic
chr4:153426990(-) A-I      intronic
chr4:153416471(-) A-I      intronic
chr4:153347684(-) A-I      intronic
chr4:153366203(-) A-I      intronic
chr4:153278611(-) A-I      intronic
chr4:153324554(-) A-I      intronic
chr4:153379268(-) A-I      intronic
chr4:153439645(-) A-I      intronic
chr4:153439314(-) A-I      intronic
chr4:153345265(-) A-I      intronic
chr4:153438045(-) A-I      intronic
chr4:153366140(-) A-I      intronic
chr4:153443083(-) A-I      intronic
chr4:153300786(-) A-I      intronic
chr4:153379375(-) A-I      intronic
chr4:153429104(-) A-I      intronic
chr4:153418460(-) A-I      intronic
chr4:153414494(-) A-I      intronic
chr4:153416541(-) A-I      intronic
chr4:153438160(-) A-I      intronic
chr4:153366100(-) A-I      intronic
chr4:153427549(-) A-I      intronic
chr4:153448850(-) A-I      intronic
chr4:153424560(-) A-I      intronic
chr4:153448753(-) A-I      intronic
chr4:153396517(-) A-I      intronic
chr4:153378674(-) A-I      intronic
chr4:153417217(-) A-I      intronic
chr4:153379304(-) A-I      intronic
chr4:153426948(-) A-I      intronic
chr4:153454121(-) A-I      intronic
chr4:153438010(-) A-I      intronic
chr4:153438132(-) A-I      intronic
chr4:153350303(-) A-I      intronic
chr4:153395929(-) A-I      intronic
chr4:153329016(-) A-I      intronic
chr4:153439279(-) A-I      intronic
chr4:153280871(-) A-I      intronic
chr4:153439413(-) A-I      intronic
chr4:153366148(-) A-I      intronic
chr4:153441588(-) A-I      intronic
chr4:153366086(-) A-I      intronic
chr4:153350266(-) A-I      intronic
chr4:153448717(-) A-I      intronic
chr4:153416398(-) A-I      intronic
chr4:153443136(-) A-I      intronic
chr4:153439378(-) A-I      intronic
chr4:153378627(-) A-I      intronic
chr4:153395994(-) A-I      intronic
chr4:153424586(-) A-I      intronic
chr4:153394753(-) A-I      intronic
chr4:153364325(-) A-I      intronic
chr4:153429098(-) A-I      intronic
chr4:153394284(-) A-I      intronic
chr4:153439724(-) A-I      intronic
chr4:153379300(-) A-I      intronic
chr4:153439392(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FBXW7
chr4:153261791(-) A-I intron -    22327324
chr4:153366086(-) A-I intron -    22327324
chr4:153394274(-) A-I intron -    22327324
chr4:153395878(-) A-I intron -    22327324
chr4:153439626(-) A-I intron -    22327324
chr4:153439722(-) A-I intron -    21960545
chr4:153439724(-) A-I intron -    21960545
chr4:153340866(-) A-G intron -    22484847
chr4:153341121(-) A-G intron -    22484847
chr4:153341167(-) A-G intron -    22484847
chr4:153341417(-) A-G intron -    22484847
chr4:153342872(-) A-G intron -    22484847
chr4:153359485(-) A-G intron -    22484847
chr4:153375416(-) A-G intron -    22484847
chr4:153278545(-) A-G intron -    22484847
chr4:153278610(-) A-G intron -    22484847
chr4:153280639(-) A-G intron -    22484847
chr4:153280871(-) A-G intron -    22484847
chr4:153283980(-) G-T intron -    22484847
chr4:153299920(-) A-G intron -    22484847
chr4:153299967(-) A-G intron -    22484847
chr4:153300096(-) A-G intron -    22484847
chr4:153300731(-) A-G intron -    22484847
chr4:153300756(-) A-G intron -    22484847
chr4:153300782(-) A-G intron -    22484847
chr4:153300786(-) A-G intron -    22484847
chr4:153300830(-) A-G intron -    22484847
chr4:153321540(-) G-T intron -    22484847
chr4:153321669(-) T-A intron -    22484847
chr4:153324554(-) A-G intron -    22484847
chr4:153324646(-) C-T intron -    22484847
chr4:153326065(-) A-G intron -    22484847
chr4:153326072(-) A-G intron -    22484847
chr4:153329016(-) A-G intron -    22484847
chr4:153329094(-) G-A intron -    22484847
chr4:153329101(-) A-G intron -    22484847
chr4:153342620(-) A-G intron -    22484847
chr4:153342628(-) G-A intron -    22484847
chr4:153345265(-) A-G intron -    22484847
chr4:153345314(-) A-G intron -    22484847
chr4:153347684(-) A-G intron -    22484847
chr4:153347743(-) G-A intron -    22484847
chr4:153350176(-) A-G intron -    22484847
chr4:153350266(-) A-G intron -    22484847
chr4:153353888(-) A-G intron -    22484847
chr4:153358420(-) T-C intron -    22484847
chr4:153358530(-) G-T intron -    22484847
chr4:153364325(-) A-G intron -    22484847
chr4:153364354(-) A-G intron -    22484847
chr4:153366086(-) A-G intron -    22484847
chr4:153366114(-) A-G intron -    22484847
chr4:153366136(-) A-G intron -    22484847
chr4:153366140(-) A-G intron -    22484847
chr4:153366148(-) A-G intron -    22484847
chr4:153366191(-) A-G intron -    22484847
chr4:153366202(-) A-G intron -    22484847
chr4:153366210(-) A-G intron -    22484847
chr4:153366257(-) A-G intron -    22484847
chr4:153366259(-) A-G intron -    22484847
chr4:153366855(-) A-G intron -    22484847
chr4:153366868(-) A-G intron -    22484847
chr4:153366903(-) A-G intron -    22484847
chr4:153366934(-) A-G intron -    22484847
chr4:153366979(-) A-G intron -    22484847
chr4:153372948(-) C-T intron -    22484847
chr4:153374322(-) A-G intron -    22484847
chr4:153378538(-) A-G intron -    22484847
chr4:153378605(-) A-G intron -    22484847
chr4:153378627(-) A-G intron -    22484847
chr4:153378674(-) A-G intron -    22484847
chr4:153379268(-) A-G intron -    22484847
chr4:153379300(-) A-G intron -    22484847
chr4:153379304(-) A-G intron -    22484847
chr4:153379309(-) A-G intron -    22484847
chr4:153379310(-) A-G intron -    22484847
chr4:153379375(-) A-G intron -    22484847
chr4:153379376(-) A-G intron -    22484847
chr4:153379391(-) A-G intron -    22484847
chr4:153379426(-) A-G intron -    22484847
chr4:153382203(-) A-G intron -    22484847
chr4:153384427(-) A-G intron -    22484847
chr4:153388093(-) G-T intron -    22484847
chr4:153388095(-) T-A intron -    22484847
chr4:153394274(-) A-G intron -    22484847
chr4:153394284(-) A-G intron -    22484847
chr4:153394339(-) A-G intron -    22484847
chr4:153394753(-) A-G intron -    22484847
chr4:153394761(-) A-G intron -    22484847
chr4:153394771(-) A-G intron -    22484847
chr4:153394834(-) A-G intron -    22484847
chr4:153394835(-) A-G intron -    22484847
chr4:153394837(-) A-G intron -    22484847
chr4:153395878(-) A-G intron -    22484847
chr4:153395911(-) T-C intron -    22484847
chr4:153395915(-) A-G intron -    22484847
chr4:153395929(-) A-G intron -    22484847
chr4:153395933(-) A-G intron -    22484847
chr4:153395946(-) A-G intron -    22484847
chr4:153395956(-) A-G intron -    22484847
chr4:153395975(-) A-G intron -    22484847
chr4:153395993(-) A-G intron -    22484847
chr4:153396132(-) A-G intron -    22484847
chr4:153396451(-) A-G intron -    22484847
chr4:153396467(-) A-G intron -    22484847
chr4:153396517(-) A-G intron -    22484847
chr4:153406083(-) A-G intron -    22484847
chr4:153414427(-) C-G intron -    22484847
chr4:153414454(-) A-G intron -    22484847
chr4:153414455(-) A-G intron -    22484847
chr4:153414482(-) A-G intron -    22484847
chr4:153414494(-) A-G intron -    22484847
chr4:153414495(-) A-G intron -    22484847
chr4:153414524(-) A-G intron -    22484847
chr4:153414583(-) A-G intron -    22484847
chr4:153414596(-) A-G intron -    22484847
chr4:153416334(-) A-G intron -    22484847
chr4:153416398(-) A-G intron -    22484847
chr4:153416471(-) A-G intron -    22484847
chr4:153416510(-) A-G intron -    22484847
chr4:153416515(-) T-G intron -    22484847
chr4:153416541(-) A-G intron -    22484847
chr4:153417229(-) A-G intron -    22484847
chr4:153417243(-) A-G intron -    22484847
chr4:153417269(-) A-G intron -    22484847
chr4:153417315(-) A-G intron -    22484847
chr4:153417609(-) A-G intron -    22484847
chr4:153417708(-) A-G intron -    22484847
chr4:153418460(-) A-G intron -    22484847
chr4:153418493(-) T-G intron -    22484847
chr4:153424559(-) A-G intron -    22484847
chr4:153424586(-) A-G intron -    22484847
chr4:153424596(-) G-A intron -    22484847
chr4:153424612(-) A-G intron -    22484847
chr4:153424637(-) A-G intron -    22484847
chr4:153424669(-) A-G intron -    22484847
chr4:153424674(-) A-G intron -    22484847
chr4:153424696(-) A-G intron -    22484847
chr4:153424697(-) A-G intron -    22484847
chr4:153426990(-) A-G intron -    22484847
chr4:153426991(-) A-G intron -    22484847
chr4:153427030(-) A-G intron -    22484847
chr4:153427106(-) A-G intron -    22484847
chr4:153427125(-) A-G intron -    22484847
chr4:153427313(-) A-G intron -    22484847
chr4:153427416(-) A-G intron -    22484847
chr4:153427422(-) A-G intron -    22484847
chr4:153427549(-) A-G intron -    22484847
chr4:153427555(-) A-G intron -    22484847
chr4:153427556(-) A-G intron -    22484847
chr4:153427558(-) A-G intron -    22484847
chr4:153428947(-) A-G intron -    22484847
chr4:153428974(-) A-G intron -    22484847
chr4:153429007(-) A-G intron -    22484847
chr4:153429011(-) A-G intron -    22484847
chr4:153429030(-) A-G intron -    22484847
chr4:153429032(-) A-G intron -    22484847
chr4:153429096(-) A-G intron -    22484847
chr4:153429098(-) A-G intron -    22484847
chr4:153429104(-) A-G intron -    22484847
chr4:153429121(-) T-C intron -    22484847
chr4:153429133(-) A-G intron -    22484847
chr4:153429137(-) A-G intron -    22484847
chr4:153429138(-) A-G intron -    22484847
chr4:153429157(-) A-G intron -    22484847
chr4:153429168(-) A-G intron -    22484847
chr4:153429216(-) A-G intron -    22484847
chr4:153429583(-) A-G intron -    22484847
chr4:153429643(-) A-G intron -    22484847
chr4:153434090(-) G-A intron -    22484847
chr4:153434113(-) G-T intron -    22484847
chr4:153434131(-) C-T intron -    22484847
chr4:153434202(-) G-A intron -    22484847
chr4:153438012(-) A-G intron -    22484847
chr4:153438045(-) A-G intron -    22484847
chr4:153438132(-) A-G intron -    22484847
chr4:153438154(-) C-A intron -    22484847
chr4:153438157(-) G-A intron -    22484847
chr4:153438160(-) A-G intron -    22484847
chr4:153438261(-) A-G intron -    22484847
chr4:153439278(-) A-G intron -    22484847
chr4:153439279(-) A-G intron -    22484847
chr4:153439305(-) A-G intron -    22484847
chr4:153439314(-) A-G intron -    22484847
chr4:153439392(-) A-G intron -    22484847
chr4:153439413(-) A-G intron -    22484847
chr4:153439430(-) A-G intron -    22484847
chr4:153439477(-) A-G intron -    22484847
chr4:153439478(-) A-G intron -    22484847
chr4:153439502(-) A-G intron -    22484847
chr4:153439515(-) A-G intron -    22484847
chr4:153439516(-) A-G intron -    22484847
chr4:153439577(-) A-G intron -    22484847
chr4:153439587(-) A-G intron -    22484847
chr4:153439593(-) A-G intron -    22484847
chr4:153439613(-) A-G intron -    22484847
chr4:153439621(-) A-G intron -    22484847
chr4:153439622(-) A-G intron -    22484847
chr4:153439623(-) A-G intron -    22484847
chr4:153439625(-) A-G intron -    22484847
chr4:153439626(-) A-G intron -    22484847
chr4:153439645(-) A-G intron -    22484847
chr4:153439721(-) A-G intron -    22484847
chr4:153439724(-) A-G intron -    22484847
chr4:153440194(-) A-G intron -    22484847
chr4:153440261(-) A-G intron -    22484847
chr4:153440269(-) A-G intron -    22484847
chr4:153440326(-) A-G intron -    22484847
chr4:153440328(-) A-G intron -    22484847
chr4:153440338(-) A-G intron -    22484847
chr4:153440350(-) A-G intron -    22484847
chr4:153440388(-) A-G intron -    22484847
chr4:153440436(-) A-G intron -    22484847
chr4:153440444(-) A-G intron -    22484847
chr4:153440459(-) A-G intron -    22484847
chr4:153440463(-) A-G intron -    22484847
chr4:153441588(-) A-G intron -    22484847
chr4:153443109(-) A-G intron -    22484847
chr4:153443110(-) A-G intron -    22484847
chr4:153443133(-) T-C intron -    22484847
chr4:153443136(-) A-G intron -    22484847
chr4:153448717(-) A-G intron -    22484847
chr4:153448736(-) A-G intron -    22484847
chr4:153448754(-) A-G intron -    22484847
chr4:153448849(-) A-G intron -    22484847
chr4:153448850(-) A-G intron -    22484847
chr4:153454168(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FBXW7
chr4:153242561-153242562(-) m6A 3'UTR       24981863
chr4:153242653-153242654(-) m6A 3'UTR       24981863
chr4:153242701-153242702(-) m6A 3'UTR       24981863
chr4:153242719-153242720(-) m6A 3'UTR       24981863
chr4:153243610-153243611(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153243627-153243628(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153243641-153243642(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153243689-153243690(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153243751-153243752(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153243765-153243766(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr4:153243847-153243848(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr4:153243877-153243878(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr4:153243885-153243886(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr4:153244042-153244043(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153244054-153244055(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153244073-153244074(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153244082-153244083(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153244120-153244121(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153244180-153244181(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr4:153244207-153244208(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr4:153244215-153244216(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr4:153244223-153244224(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr4:153244252-153244253(-) m6A CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr4:153245344-153245345(-) m6A CDS//exon       27773535
chr4:153245357-153245358(-) m6A CDS//exon       27773535
chr4:153245362-153245363(-) m6A CDS//exon       27773535
chr4:153245418-153245419(-) m6A CDS//exon       27773535
chr4:153245426-153245427(-) m6A CDS//exon       27773535
chr4:153247207-153247208(-) m6A CDS//exon       -
chr4:153247213-153247214(-) m6A CDS//exon       -
chr4:153268175-153268176(-) m6A CDS//exon       27773535
chr4:153269830-153269831(-) m6A CDS//intron       27773535
chr4:153269891-153269892(-) m6A 5'UTR//intron       27773535
chr4:153271219-153271220(-) m6A CDS//exon       27773535
chr4:153271259-153271260(-) m6A CDS//exon       27773535
chr4:153273704-153273705(-) m6A CDS//exon//intron       27773535
chr4:153273720-153273721(-) m6A CDS//exon//intron       24981863//27773535
chr4:153332390-153332391(-) m6A 3'UTR//intron       27773535
chr4:153332420-153332421(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr4:153332462-153332463(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr4:153332503-153332504(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332521-153332522(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332547-153332548(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332599-153332600(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332634-153332635(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332646-153332647(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332664-153332665(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332674-153332675(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332686-153332687(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332716-153332717(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332730-153332731(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332760-153332761(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332766-153332767(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332812-153332813(-) Am CDS       -
chr4:153332817-153332818(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332835-153332836(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332862-153332863(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332912-153332913(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153332943-153332944(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:153333014-153333015(-) m6A 5'UTR       24284625//25456834//27773535//27371828//22608085
chr4:153333725-153333726(-) m6A 5'UTR//intron       27773535
chr4:153451561-153451562(-) m6A exon//intron       27773535
chr4:153451671-153451672(-) m6A exon//intron       27773535
chr4:153451730-153451731(-) m6A exon//intron       27773535
chr4:153456132-153456133(-) m6A 5'UTR//exon       25456834//27371828
chr4:153456233-153456234(-) m6A 5'UTR//intron       24284625//25456834//27371828//27773536
chr4:153456300-153456301(-) m6A 5'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr4:153456356-153456357(-) m6A 5'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr4:153456377-153456378(-) m6A 5'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr4:153456388-153456389(-) m6A 5'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr4:153456424-153456425(-) m6A 5'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr4:153456491-153456492(-) m6A 5'UTR       25456834//27371828//27773536
chr4:153456590-153456591(-) m6A 5'UTR       25456834//24981863//27371828//27773536//22608085
chr4:153456595-153456596(-) m6A 5'UTR       25456834//24981863//27371828//27773536//22608085
chr4:153456632-153456633(-) m6A 5'UTR       25456834//24981863//27371828//27773536//22608085
chr4:153456683-153456684(-) m6A 5'UTR       25456834//27371828//27773536
chr4:153456837-153456838(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536
chr4:153457088-153457089(-) m6A 5'UTR       25456834//27371828//27773536
chr4:153457145-153457146(-) m6A 5'UTR       25456834//24981863//28052920//27371828//27773536
chr4:153457202-153457203(-) m6A 5'UTR       24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-223-5p
Exosome Primary dendritic cells     21505438
Exosome Breast milk     22211110
Exosome Plasma     23663360
Exosome B cell lymphoma cell lines|EBV-transformed lymphoblastoid B cells     25242326
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
FBXW7
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-223-5p
Interactor2: FBXW7

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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