Detail Information

Basic Information:


  VIRBase ID:  

HHID00065524

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-223-5p:           MAPK1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-223-5p MAPK1
miRBase
Accession/Entrez ID
MIMAT0004570 5594
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ERK//ERK-2//ERK2//ERT1//MAPK2//NS13//p38//p40//p41//p41mapk//p42-MAPK//P42MAPK//PRKM1//PRKM2

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-223-5p
rs1240009384 chrX:66018913    A/T
rs1397275461 chrX:66018904    G/T
rs1464475149 chrX:66018916    T/C
rs761701581 chrX:66018906    C/G
rs772305537 chrX:66018909    G/A
rs774279244 chrX:66018895    C/T
rs890919635 chrX:66018896    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MAPK1
chr22:22137101(-) A-I      intronic
chr22:22125191(-) A-I      intronic
chr22:22125250(-) A-I      intronic
chr22:22144957(-) A-I      intronic
chr22:22143999(-) A-I      intronic
chr22:22125246(-) A-I      intronic
chr22:22132545(-) A-I      intronic
chr22:22131951(-) A-I      intronic
chr22:22125645(-) A-I      intronic
chr22:22137139(-) A-I      intronic
chr22:22124627(-) A-I      intronic
chr22:22125234(-) A-I      intronic
chr22:22125514(-) A-I      intronic
chr22:22125510(-) A-I      intronic
chr22:22125449(-) A-I      intronic
chr22:22125264(-) A-I      intronic
chr22:22125263(-) A-I      intronic
chr22:22125261(-) A-I      intronic
chr22:22131809(-) A-I      intronic
chr22:22125214(-) A-I      intronic
chr22:22137100(-) A-I      intronic
chr22:22125197(-) A-I      intronic
chr22:22131842(-) A-I      intronic
chr22:22131853(-) A-I      intronic
chr22:22131862(-) A-I      intronic
chr22:22135827(-) A-I      intronic
chr22:22135842(-) A-I      intronic
chr22:22135846(-) A-I      intronic
chr22:22137087(-) A-I      intronic
chr22:22137092(-) A-I      intronic
chr22:22137093(-) A-I      intronic
chr22:22137094(-) A-I      intronic
chr22:22137099(-) A-I      intronic
chr22:22125255(-) A-I      intronic
chr22:22207521(-) A-I      intronic
chr22:22152715(-) A-I      intronic
chr22:22137653(-) A-I      intronic
chr22:22188457(-) A-I      intronic
chr22:22188452(-) A-I      intronic
chr22:22188292(-) A-I      intronic
chr22:22185541(-) A-I      intronic
chr22:22185387(-) A-I      intronic
chr22:22184749(-) A-I      intronic
chr22:22184572(-) A-I      intronic
chr22:22179462(-) A-I      intronic
chr22:22148291(-) A-I      intronic
chr22:22148371(-) A-I      intronic
chr22:22148583(-) A-I      intronic
chr22:22149040(-) A-I      intronic
chr22:22196461(-) A-I      intronic
chr22:22145026(-) A-I      intronic
chr22:22203424(-) A-I      intronic
chr22:22145517(-) A-I      intronic
chr22:22203432(-) A-I      intronic
chr22:22124393(-) A-I      intronic
chr22:22124008(-) A-I      intronic
chr22:22123973(-) A-I      intronic
chr22:22123918(-) A-I      intronic
chr22:22123895(-) A-I      intronic
chr22:22123872(-) A-I      intronic
chr22:22123849(-) A-I      intronic
chr22:22123836(-) A-I      intronic
chr22:22179439(-) A-I      intronic
chr22:22179400(-) A-I      intronic
chr22:22218832(-) A-I      intronic
chr22:22218713(-) A-I      intronic
chr22:22218688(-) A-I      intronic
chr22:22174145(-) A-I      intronic
chr22:22172121(-) A-I      intronic
chr22:22172109(-) A-I      intronic
chr22:22172091(-) A-I      intronic
chr22:22169893(-) A-I      intronic
chr22:22216908(-) A-I      intronic
chr22:22216836(-) A-I      intronic
chr22:22216786(-) A-I      intronic
chr22:22169870(-) A-I      intronic
chr22:22169646(-) A-I      intronic
chr22:22169558(-) A-I      intronic
chr22:22169486(-) A-I      intronic
chr22:22169478(-) A-I      intronic
chr22:22169276(-) A-I      intronic
chr22:22137654(-) A-I      intronic
chr22:22137719(-) A-I      intronic
chr22:22137876(-) A-I      intronic
chr22:22137898(-) A-I      intronic
chr22:22138208(-) A-I      intronic
chr22:22138219(-) A-I      intronic
chr22:22138257(-) A-I      intronic
chr22:22138258(-) A-I      intronic
chr22:22138263(-) A-I      intronic
chr22:22168937(-) A-I      intronic
chr22:22168887(-) A-I      intronic
chr22:22167731(-) A-I      intronic
chr22:22167253(-) A-I      intronic
chr22:22167126(-) A-I      intronic
chr22:22166203(-) A-I      intronic
chr22:22166202(-) A-I      intronic
chr22:22166187(-) A-I      intronic
chr22:22165217(-) A-I      intronic
chr22:22165215(-) A-I      intronic
chr22:22164018(-) A-I      intronic
chr22:22159911(-) A-I      intronic
chr22:22159680(-) A-I      intronic
chr22:22159304(-) A-I      intronic
chr22:22159155(-) A-I      intronic
chr22:22159101(-) A-I      intronic
chr22:22155783(-) A-I      intronic
chr22:22155672(-) A-I      intronic
chr22:22155641(-) A-I      intronic
chr22:22155564(-) A-I      intronic
chr22:22155470(-) A-I      intronic
chr22:22155458(-) A-I      intronic
chr22:22137652(-) A-I      intronic
chr22:22137597(-) A-I      intronic
chr22:22137584(-) A-I      intronic
chr22:22137545(-) A-I      intronic
chr22:22137456(-) A-I      intronic
chr22:22155431(-) A-I      intronic
chr22:22155374(-) A-I      intronic
chr22:22137105(-) A-I      intronic
chr22:22137096(-) A-I      intronic
chr22:22137061(-) A-I      intronic
chr22:22137037(-) A-I      intronic
chr22:22136817(-) A-I      intronic
chr22:22135819(-) A-I      intronic
chr22:22125557(-) A-I      intronic
chr22:22125550(-) A-I      intronic
chr22:22135676(-) A-I      intronic
chr22:22135669(-) A-I      intronic
chr22:22204480(-) A-I      intronic
chr22:22135641(-) A-I      intronic
chr22:22135439(-) A-I      intronic
chr22:22135428(-) A-I      intronic
chr22:22135415(-) A-I      intronic
chr22:22135391(-) A-I      intronic
chr22:22135261(-) A-I      intronic
chr22:22125491(-) A-I      intronic
chr22:22132463(-) A-I      intronic
chr22:22131970(-) A-I      intronic
chr22:22131958(-) A-I      intronic
chr22:22196460(-) A-I      intronic
chr22:22196446(-) A-I      intronic
chr22:22196406(-) A-I      intronic
chr22:22196393(-) A-I      intronic
chr22:22125224(-) A-I      intronic
chr22:22195388(-) A-I      intronic
chr22:22194981(-) A-I      intronic
chr22:22139702(-) A-I      intronic
chr22:22125450(-) A-I      intronic
chr22:22125381(-) A-I      intronic
chr22:22125353(-) A-I      intronic
chr22:22196464(-) A-I      intronic
chr22:22125299(-) A-I      intronic
chr22:22125289(-) A-I      intronic
chr22:22125279(-) A-I      intronic
chr22:22139906(-) A-I      intronic
chr22:22139967(-) A-I      intronic
chr22:22140185(-) A-I      intronic
chr22:22144863(-) A-I      intronic
chr22:22144948(-) A-I      intronic
chr22:22144949(-) A-I      intronic
chr22:22145300(-) A-I      intronic
chr22:22145533(-) A-I      intronic
chr22:22139698(-) A-I      intronic
chr22:22139362(-) A-I      intronic
chr22:22139234(-) A-I      intronic
chr22:22145539(-) A-I      intronic
chr22:22145583(-) A-I      intronic
chr22:22145591(-) A-I      intronic
chr22:22145622(-) A-I      intronic
chr22:22145660(-) A-I      intronic
chr22:22208617(-) A-I      intronic
chr22:22138599(-) A-I      intronic
chr22:22208607(-) A-I      intronic
chr22:22208551(-) A-I      intronic
chr22:22208175(-) A-I      intronic
chr22:22208171(-) A-I      intronic
chr22:22205823(-) A-I      intronic
chr22:22205431(-) A-I      intronic
chr22:22205417(-) A-I      intronic
chr22:22131922(-) A-I      intronic
chr22:22131794(-) A-I      intronic
chr22:22130368(-) A-I      intronic
chr22:22138307(-) A-I      intronic
chr22:22138315(-) A-I      intronic
chr22:22123810(-) A-I      intronic
chr22:22138404(-) A-I      intronic
chr22:22138529(-) A-I      intronic
chr22:22125254(-) A-I      intronic
chr22:22125245(-) A-I      intronic
chr22:22125223(-) A-I      intronic
chr22:22125182(-) A-I      intronic
chr22:22125178(-) A-I      intronic
chr22:22125171(-) A-I      intronic
chr22:22125146(-) A-I      intronic
chr22:22124800(-) A-I      intronic
chr22:22124793(-) A-I      intronic
chr22:22124783(-) A-I      intronic
chr22:22124706(-) A-I      intronic
chr22:22138581(-) A-I      intronic
chr22:22135711(-) A-I      intronic
chr22:22130210(-) A-I      intronic
chr22:22196858(-) A-I      intronic
chr22:22199267(-) A-I      intronic
chr22:22199551(-) A-I      intronic
chr22:22199662(-) A-I      intronic
chr22:22130165(-) A-I      intronic
chr22:22199663(-) A-I      intronic
chr22:22135800(-) A-I      intronic
chr22:22203288(-) A-I      intronic
chr22:22147564(-) A-I      intronic
chr22:22147772(-) A-I      intronic
chr22:22203369(-) A-I      intronic
chr22:22203408(-) A-I      intronic
chr22:22130140(-) A-I      intronic
chr22:22127740(-) A-I      intronic
chr22:22127702(-) A-I      intronic
chr22:22125898(-) A-I      intronic
chr22:22125897(-) A-I      intronic
chr22:22125584(-) A-I      intronic
chr22:22125574(-) A-I      intronic
chr22:22155302(-) A-I      intronic
chr22:22155284(-) A-I      intronic
chr22:22125563(-) A-I      intronic
chr22:22149233(-) A-I      intronic
chr22:22149388(-) A-I      intronic
chr22:22149398(-) A-I      intronic
chr22:22124695(-) A-I      intronic
chr22:22149521(-) A-I      intronic
chr22:22149551(-) A-I      intronic
chr22:22149865(-) A-I      intronic
chr22:22149905(-) A-I      intronic
chr22:22149924(-) A-I      intronic
chr22:22123793(-) A-I      intronic
chr22:22149936(-) A-I      intronic
chr22:22149945(-) A-I      intronic
chr22:22204479(-) A-I      intronic
chr22:22204404(-) A-I      intronic
chr22:22124486(-) A-I      intronic
chr22:22203502(-) A-I      intronic
chr22:22174155(-) A-I      intronic
chr22:22148250(-) A-I      intronic
chr22:22148290(-) A-I      intronic
chr22:22194973(-) A-I      intronic
chr22:22194911(-) A-I      intronic
chr22:22194651(-) A-I      intronic
chr22:22194536(-) A-I      intronic
chr22:22194489(-) A-I      intronic
chr22:22194473(-) A-I      intronic
chr22:22193730(-) A-I      intronic
chr22:22193718(-) A-I      intronic
chr22:22188715(-) A-I      intronic
chr22:22188711(-) A-I      intronic
chr22:22196475(-) A-I      intronic
chr22:22196476(-) A-I      intronic
chr22:22196508(-) A-I      intronic
chr22:22196797(-) A-I      intronic
chr22:22150471(-) A-I      intronic
chr22:22150514(-) A-I      intronic
chr22:22153070(-) A-I      intronic
chr22:22204647(-) A-I      intronic
chr22:22204538(-) A-I      intronic
chr22:22204482(-) A-I      intronic
chr22:22125559(-) A-I      intronic
chr22:22125558(-) A-I      intronic
chr22:22125350(-) A-I      intronic
chr22:22112335(-) A-I      3'UTR
chr22:22164240(-) A-I      intronic
chr22:22220556(-) A-I      intronic
chr22:22169895(-) A-I      intronic
chr22:22149524(-) A-I      intronic
chr22:22122667(-) A-I      intronic
chr22:22217751(-) A-I      intronic
chr22:22131849(-) A-I      intronic
chr22:22148674(-) A-I      intronic
chr22:22169482(-) A-I      intronic
chr22:22177465(-) A-I      intronic
chr22:22149192(-) A-I      intronic
chr22:22194867(-) A-I      intronic
chr22:22149589(-) A-I      intronic
chr22:22148952(-) A-I      intronic
chr22:22196717(-) A-I      intronic
chr22:22205396(-) A-I      intronic
chr22:22158122(-) A-I      intronic
chr22:22155578(-) A-I      intronic
chr22:22148964(-) A-I      intronic
chr22:22218665(-) A-I      intronic
chr22:22147940(-) A-I      intronic
chr22:22144620(-) A-I      intronic
chr22:22125920(-) A-I      intronic
chr22:22130243(-) A-I      intronic
chr22:22125444(-) A-I      intronic
chr22:22169492(-) A-I      intronic
chr22:22125914(-) A-I      intronic
chr22:22149910(-) A-I      intronic
chr22:22208157(-) A-I      intronic
chr22:22204497(-) A-I      intronic
chr22:22169212(-) A-I      intronic
chr22:22137397(-) A-I      intronic
chr22:22148944(-) A-I      intronic
chr22:22139275(-) A-I      intronic
chr22:22139257(-) A-I      intronic
chr22:22137974(-) A-I      intronic
chr22:22125936(-) A-I      intronic
chr22:22149193(-) A-I      intronic
chr22:22138237(-) A-I      intronic
chr22:22135275(-) A-I      intronic
chr22:22136823(-) A-I      intronic
chr22:22147941(-) A-I      intronic
chr22:22159834(-) A-I      intronic
chr22:22130068(-) A-I      intronic
chr22:22159103(-) A-I      intronic
chr22:22137871(-) A-I      intronic
chr22:22139980(-) A-I      intronic
chr22:22125424(-) A-I      intronic
chr22:22188340(-) A-I      intronic
chr22:22155415(-) A-I      intronic
chr22:22139187(-) A-I      intronic
chr22:22203469(-) A-I      intronic
chr22:22203550(-) A-I      intronic
chr22:22144109(-) A-I      intronic
chr22:22218536(-) A-I      intronic
chr22:22137698(-) A-I      intronic
chr22:22194484(-) A-I      intronic
chr22:22153048(-) A-I      intronic
chr22:22148909(-) A-I      intronic
chr22:22139334(-) A-I      intronic
chr22:22138171(-) A-I      intronic
chr22:22148954(-) A-I      intronic
chr22:22144980(-) A-I      intronic
chr22:22139307(-) A-I      intronic
chr22:22124482(-) A-I      intronic
chr22:22149525(-) A-I      intronic
chr22:22211392(-) A-I      intronic
chr22:22174139(-) A-I      intronic
chr22:22159245(-) A-I      intronic
chr22:22149795(-) A-I      intronic
chr22:22195371(-) A-I      intronic
chr22:22172729(-) A-I      intronic
chr22:22148723(-) A-I      intronic
chr22:22196710(-) A-I      intronic
chr22:22136179(-) A-I      intronic
chr22:22208724(-) A-I      intronic
chr22:22148252(-) A-I      intronic
chr22:22125654(-) A-I      intronic
chr22:22148262(-) A-I      intronic
chr22:22125158(-) A-I      intronic
chr22:22195250(-) A-I      intronic
chr22:22179497(-) A-I      intronic
chr22:22138312(-) A-I      intronic
chr22:22155347(-) A-I      intronic
chr22:22129839(-) A-I      intronic
chr22:22188281(-) A-I      intronic
chr22:22155638(-) A-I      intronic
chr22:22149837(-) A-I      intronic
chr22:22124404(-) A-I      intronic
chr22:22150011(-) A-I      intronic
chr22:22130250(-) A-I      intronic
chr22:22148257(-) A-I      intronic
chr22:22159178(-) A-I      intronic
chr22:22131894(-) A-I      intronic
chr22:22217695(-) A-I      intronic
chr22:22158248(-) A-I      intronic
chr22:22152634(-) A-I      intronic
chr22:22169498(-) A-I      intronic
chr22:22137196(-) A-I      intronic
chr22:22125487(-) A-I      intronic
chr22:22125648(-) A-I      intronic
chr22:22148625(-) A-I      intronic
chr22:22135357(-) A-I      intronic
chr22:22112260(-) A-I      3'UTR
chr22:22177535(-) A-I      intronic
chr22:22211371(-) A-I      intronic
chr22:22217836(-) A-I      intronic
chr22:22179444(-) A-I      intronic
chr22:22149256(-) A-I      intronic
chr22:22169892(-) A-I      intronic
chr22:22169871(-) A-I      intronic
chr22:22130268(-) A-I      intronic
chr22:22124326(-) A-I      intronic
chr22:22145295(-) A-I      intronic
chr22:22124560(-) A-I      intronic
chr22:22125470(-) A-I      intronic
chr22:22148870(-) A-I      intronic
chr22:22159514(-) A-I      intronic
chr22:22137047(-) A-I      intronic
chr22:22168932(-) A-I      intronic
chr22:22137964(-) A-I      intronic
chr22:22208077(-) A-I      intronic
chr22:22131950(-) A-I      intronic
chr22:22164896(-) A-I      intronic
chr22:22167783(-) A-I      intronic
chr22:22125519(-) A-I      intronic
chr22:22145481(-) A-I      intronic
chr22:22155709(-) A-I      intronic
chr22:22164168(-) A-I      intronic
chr22:22207364(-) A-I      intronic
chr22:22139310(-) A-I      intronic
chr22:22218538(-) A-I      intronic
chr22:22194487(-) A-I      intronic
chr22:22137794(-) A-I      intronic
chr22:22123947(-) A-I      intronic
chr22:22130352(-) A-I      intronic
chr22:22199731(-) A-I      intronic
chr22:22148728(-) A-I      intronic
chr22:22152751(-) A-I      intronic
chr22:22188676(-) A-I      intronic
chr22:22188380(-) A-I      intronic
chr22:22149101(-) A-I      intronic
chr22:22136770(-) A-I      intronic
chr22:22149808(-) A-I      intronic
chr22:22149184(-) A-I      intronic
chr22:22170105(-) A-I      intronic
chr22:22170094(-) A-I      intronic
chr22:22138482(-) A-I      intronic
chr22:22148603(-) A-I      intronic
chr22:22138156(-) A-I      intronic
chr22:22165190(-) A-I      intronic
chr22:22203410(-) A-I      intronic
chr22:22124626(-) A-I      intronic
chr22:22124567(-) A-I      intronic
chr22:22124703(-) A-I      intronic
chr22:22205835(-) A-I      intronic
chr22:22159846(-) A-I      intronic
chr22:22196378(-) A-I      intronic
chr22:22138293(-) A-I      intronic
chr22:22155704(-) A-I      intronic
chr22:22137925(-) A-I      intronic
chr22:22131872(-) A-I      intronic
chr22:22145419(-) A-I      intronic
chr22:22208205(-) A-I      intronic
chr22:22179424(-) A-I      intronic
chr22:22163239(-) A-I      intronic
chr22:22144571(-) A-I      intronic
chr22:22145420(-) A-I      intronic
chr22:22139244(-) A-I      intronic
chr22:22203456(-) A-I      intronic
chr22:22131819(-) A-I      intronic
chr22:22139260(-) A-I      intronic
chr22:22137569(-) A-I      intronic
chr22:22159170(-) A-I      intronic
chr22:22205883(-) A-I      intronic
chr22:22147919(-) A-I      intronic
chr22:22170200(-) A-I      intronic
chr22:22124523(-) A-I      intronic
chr22:22198548(-) A-I      intronic
chr22:22159683(-) A-I      intronic
chr22:22144584(-) A-I      intronic
chr22:22125848(-) A-I      intronic
chr22:22165241(-) A-I      intronic
chr22:22143989(-) A-I      intronic
chr22:22147914(-) A-I      intronic
chr22:22155777(-) A-I      intronic
chr22:22204593(-) A-I      intronic
chr22:22147934(-) A-I      intronic
chr22:22137364(-) A-I      intronic
chr22:22123771(-) A-I      intronic
chr22:22123783(-) A-I      intronic
chr22:22155338(-) A-I      intronic
chr22:22220434(-) A-I      intronic
chr22:22218638(-) A-I      intronic
chr22:22194861(-) A-I      intronic
chr22:22169269(-) A-I      intronic
chr22:22149846(-) A-I      intronic
chr22:22172850(-) A-I      intronic
chr22:22138924(-) A-I      intronic
chr22:22168957(-) A-I      intronic
chr22:22165189(-) A-I      intronic
chr22:22220435(-) A-I      intronic
chr22:22125884(-) A-I      intronic
chr22:22155405(-) A-I      intronic
chr22:22159617(-) A-I      intronic
chr22:22149557(-) A-I      intronic
chr22:22125932(-) A-I      intronic
chr22:22167715(-) A-I      intronic
chr22:22196866(-) A-I      intronic
chr22:22148951(-) A-I      intronic
chr22:22125530(-) A-I      intronic
chr22:22136773(-) A-I      intronic
chr22:22131871(-) A-I      intronic
chr22:22218678(-) A-I      intronic
chr22:22204459(-) A-I      intronic
chr22:22208091(-) A-I      intronic
chr22:22148659(-) A-I      intronic
chr22:22203571(-) A-I      intronic
chr22:22137985(-) A-I      intronic
chr22:22125359(-) A-I      intronic
chr22:22148624(-) A-I      intronic
chr22:22137611(-) A-I      intronic
chr22:22136815(-) A-I      intronic
chr22:22217721(-) A-I      intronic
chr22:22137872(-) A-I      intronic
chr22:22145490(-) A-I      intronic
chr22:22215586(-) A-I      intronic
chr22:22130247(-) A-I      intronic
chr22:22169562(-) A-I      intronic
chr22:22199552(-) A-I      intronic
chr22:22159115(-) A-I      intronic
chr22:22124425(-) A-I      intronic
chr22:22145659(-) A-I      intronic
chr22:22148735(-) A-I      intronic
chr22:22123863(-) A-I      intronic
chr22:22144959(-) A-I      intronic
chr22:22137388(-) A-I      intronic
chr22:22124522(-) A-I      intronic
chr22:22139665(-) A-I      intronic
chr22:22137406(-) A-I      intronic
chr22:22149930(-) A-I      intronic
chr22:22125226(-) A-I      intronic
chr22:22158173(-) A-I      intronic
chr22:22148631(-) A-I      intronic
chr22:22155484(-) A-I      intronic
chr22:22125467(-) A-I      intronic
chr22:22148592(-) A-I      intronic
chr22:22203304(-) A-I      intronic
chr22:22152896(-) A-I      intronic
chr22:22142092(-) A-I      intronic
chr22:22205355(-) A-I      intronic
chr22:22145271(-) A-I      intronic
chr22:22149219(-) A-I      intronic
chr22:22137546(-) A-I      intronic
chr22:22175153(-) A-I      intronic
chr22:22159752(-) A-I      intronic
chr22:22179288(-) A-I      intronic
chr22:22148872(-) A-I      intronic
chr22:22208590(-) A-I      intronic
chr22:22199199(-) A-I      intronic
chr22:22188283(-) A-I      intronic
chr22:22155478(-) A-I      intronic
chr22:22159315(-) A-I      intronic
chr22:22138394(-) A-I      intronic
chr22:22124812(-) A-I      intronic
chr22:22139814(-) A-I      intronic
chr22:22155699(-) A-I      intronic
chr22:22208174(-) A-I      intronic
chr22:22130046(-) A-I      intronic
chr22:22148626(-) A-I      intronic
chr22:22217756(-) A-I      intronic
chr22:22148883(-) A-I      intronic
chr22:22196833(-) A-I      intronic
chr22:22150018(-) A-I      intronic
chr22:22148225(-) A-I      intronic
chr22:22123930(-) A-I      intronic
chr22:22145360(-) A-I      intronic
chr22:22169557(-) A-I      intronic
chr22:22135952(-) A-I      intronic
chr22:22136743(-) A-I      intronic
chr22:22129834(-) A-I      intronic
chr22:22124614(-) A-I      intronic
chr22:22204511(-) A-I      intronic
chr22:22135501(-) A-I      intronic
chr22:22199321(-) A-I      intronic
chr22:22137142(-) A-I      intronic
chr22:22144997(-) A-I      intronic
chr22:22147943(-) A-I      intronic
chr22:22138162(-) A-I      intronic
chr22:22155558(-) A-I      intronic
chr22:22166186(-) A-I      intronic
chr22:22137430(-) A-I      intronic
chr22:22148193(-) A-I      intronic
chr22:22131953(-) A-I      intronic
chr22:22139357(-) A-I      intronic
chr22:22208085(-) A-I      intronic
chr22:22184690(-) A-I      intronic
chr22:22147874(-) A-I      intronic
chr22:22189574(-) A-I      intronic
chr22:22195387(-) A-I      intronic
chr22:22203514(-) A-I      intronic
chr22:22217727(-) A-I      intronic
chr22:22149550(-) A-I      intronic
chr22:22136679(-) A-I      intronic
chr22:22148649(-) A-I      intronic
chr22:22196638(-) A-I      intronic
chr22:22137020(-) A-I      intronic
chr22:22129904(-) A-I      intronic
chr22:22145287(-) A-I      intronic
chr22:22131930(-) A-I      intronic
chr22:22149911(-) A-I      intronic
chr22:22188455(-) A-I      intronic
chr22:22152763(-) A-I      intronic
chr22:22165184(-) A-I      intronic
chr22:22144035(-) A-I      intronic
chr22:22196470(-) A-I      intronic
chr22:22139713(-) A-I      intronic
chr22:22159682(-) A-I      intronic
chr22:22139704(-) A-I      intronic
chr22:22137198(-) A-I      intronic
chr22:22125873(-) A-I      intronic
chr22:22124401(-) A-I      intronic
chr22:22196342(-) A-I      intronic
chr22:22148168(-) A-I      intronic
chr22:22148593(-) A-I      intronic
chr22:22124387(-) A-I      intronic
chr22:22218624(-) A-I      intronic
chr22:22203290(-) A-I      intronic
chr22:22148249(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MAPK1
chr22:22118349(-) A-I exon 3'UTR    19478186
chr22:22118433(-) A-I exon 3'UTR    19478186
chr22:22217695(-) A-I intron -    15342557
chr22:22217721(-) A-I intron -    15342557
chr22:22217751(-) A-I intron -    15342557   //15258596
chr22:22217756(-) A-I intron -    15342557   //15258596
chr22:22217836(-) A-I intron -    15342557   //15258596
chr22:22218603(-) A-I intron -    15342557
chr22:22218624(-) A-I intron -    15342557
chr22:22218665(-) A-I intron -    15342557
chr22:22220538(-) A-I intron -    15342557   //15258596
chr22:22187503(-) A-I intron -    21960545
chr22:22187504(-) A-I intron -    21960545
chr22:22124425(-) A-G intron -    22484847
chr22:22136823(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MAPK1
chr22:22110054-22110055(-) m6A 3'UTR       27773535
chr22:22110231-22110232(-) m6A 3'UTR       27773535
chr22:22110393-22110394(-) m6A 3'UTR       27773535
chr22:22110404-22110405(-) m6A 3'UTR       27773535
chr22:22110436-22110437(-) m6A 3'UTR       27773535
chr22:22110441-22110442(-) m6A 3'UTR       27773535
chr22:22110446-22110447(-) m6A 3'UTR       27773535
chr22:22110463-22110464(-) m6A 3'UTR       27773535
chr22:22110491-22110492(-) m6A 3'UTR       27773535
chr22:22112865-22112866(-) m6A 3'UTR       25456834
chr22:22112881-22112882(-) m6A 3'UTR       25456834
chr22:22112937-22112938(-) m6A 3'UTR       25456834
chr22:22112969-22112970(-) m6A 3'UTR       25456834
chr22:22112992-22112993(-) m6A 3'UTR       25456834
chr22:22114070-22114071(-) m6A 3'UTR       27773535
chr22:22114144-22114145(-) m6A 3'UTR       27773535
chr22:22114165-22114166(-) m6A 3'UTR       27773535
chr22:22114222-22114223(-) m6A 3'UTR       27773535
chr22:22114272-22114273(-) m6A 3'UTR       27773535
chr22:22114660-22114661(-) m6A 3'UTR       27773535
chr22:22116438-22116439(-) Y 3'UTR       26075521
chr22:22117094-22117095(-) m6A 3'UTR       24284625//24981863
chr22:22117358-22117359(-) m6A 3'UTR       24284625//24981863//26404942//22575960//22608085
chr22:22118497-22118498(-) m6A 3'UTR//exon       27371828
chr22:22118512-22118513(-) m6A 3'UTR//exon       27371828
chr22:22123524-22123525(-) m6A CDS//exon       26404942//27371828
chr22:22123540-22123541(-) m6A CDS//exon       26404942//27371828
chr22:22162009-22162010(-) m6A CDS       26404942
chr22:22162017-22162018(-) m6A CDS       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-223-5p
Exosome Primary dendritic cells     21505438
Exosome Breast milk     22211110
Exosome Plasma     23663360
Exosome B cell lymphoma cell lines|EBV-transformed lymphoblastoid B cells     25242326
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
MAPK1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Cytosolic polysome Human T lymphocytes (Jurkat E6-1)     12923260
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-223-5p
Interactor2: MAPK1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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