Detail Information

Basic Information:


  VIRBase ID:  

HHID00065508

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-223-5p:           CRK:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-223-5p CRK
miRBase
Accession/Entrez ID
MIMAT0004570 1398
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CRKII//p38

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-223-5p
rs1240009384 chrX:66018913    A/T
rs1397275461 chrX:66018904    G/T
rs1464475149 chrX:66018916    T/C
rs761701581 chrX:66018906    C/G
rs772305537 chrX:66018909    G/A
rs774279244 chrX:66018895    C/T
rs890919635 chrX:66018896    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CRK
chr17:1351127(-) A-I      intronic
chr17:1342305(-) A-I      intronic
chr17:1351075(-) A-I      intronic
chr17:1342960(-) A-I      intronic
chr17:1342307(-) A-I      intronic
chr17:1342310(-) A-I      intronic
chr17:1357531(-) A-I      intronic
chr17:1347379(-) A-I      intronic
chr17:1352122(-) A-I      intronic
chr17:1345396(-) A-I      intronic
chr17:1349958(-) A-I      intronic
chr17:1347395(-) A-I      intronic
chr17:1349933(-) A-I      intronic
chr17:1349921(-) A-I      intronic
chr17:1351002(-) A-I      intronic
chr17:1351071(-) A-I      intronic
chr17:1325660(-) A-I      3'UTR
chr17:1350999(-) A-I      intronic
chr17:1325563(-) A-I      3'UTR
chr17:1351107(-) A-I      intronic
chr17:1325652(-) A-I      3'UTR
chr17:1351086(-) A-I      intronic
chr17:1333606(-) A-I      intronic
chr17:1342296(-) A-I      intronic
chr17:1342301(-) A-I      intronic
chr17:1344340(-) A-I      intronic
chr17:1354364(-) A-I      intronic
chr17:1354362(-) A-I      intronic
chr17:1354297(-) A-I      intronic
chr17:1354097(-) A-I      intronic
chr17:1354032(-) A-I      intronic
chr17:1353973(-) A-I      intronic
chr17:1353797(-) A-I      intronic
chr17:1353679(-) A-I      intronic
chr17:1353368(-) A-I      intronic
chr17:1353331(-) A-I      intronic
chr17:1353276(-) A-I      intronic
chr17:1353272(-) A-I      intronic
chr17:1351895(-) A-I      intronic
chr17:1351841(-) A-I      intronic
chr17:1351808(-) A-I      intronic
chr17:1351754(-) A-I      intronic
chr17:1351043(-) A-I      intronic
chr17:1351006(-) A-I      intronic
chr17:1350894(-) A-I      intronic
chr17:1349978(-) A-I      intronic
chr17:1348385(-) A-I      intronic
chr17:1348379(-) A-I      intronic
chr17:1348366(-) A-I      intronic
chr17:1348342(-) A-I      intronic
chr17:1348330(-) A-I      intronic
chr17:1348320(-) A-I      intronic
chr17:1348200(-) A-I      intronic
chr17:1348180(-) A-I      intronic
chr17:1347813(-) A-I      intronic
chr17:1347766(-) A-I      intronic
chr17:1347552(-) A-I      intronic
chr17:1347300(-) A-I      intronic
chr17:1347189(-) A-I      intronic
chr17:1347178(-) A-I      intronic
chr17:1347134(-) A-I      intronic
chr17:1347132(-) A-I      intronic
chr17:1347131(-) A-I      intronic
chr17:1346952(-) A-I      intronic
chr17:1346410(-) A-I      intronic
chr17:1334979(-) A-I      intronic
chr17:1334934(-) A-I      intronic
chr17:1334919(-) A-I      intronic
chr17:1334764(-) A-I      intronic
chr17:1334194(-) A-I      intronic
chr17:1346152(-) A-I      intronic
chr17:1344854(-) A-I      intronic
chr17:1344914(-) A-I      intronic
chr17:1344965(-) A-I      intronic
chr17:1345018(-) A-I      intronic
chr17:1345099(-) A-I      intronic
chr17:1344354(-) A-I      intronic
chr17:1345422(-) A-I      intronic
chr17:1345573(-) A-I      intronic
chr17:1345697(-) A-I      intronic
chr17:1335827(-) A-I      intronic
chr17:1335846(-) A-I      intronic
chr17:1335882(-) A-I      intronic
chr17:1335915(-) A-I      intronic
chr17:1335949(-) A-I      intronic
chr17:1346330(-) A-I      intronic
chr17:1336885(-) A-I      intronic
chr17:1336909(-) A-I      intronic
chr17:1336950(-) A-I      intronic
chr17:1336992(-) A-I      intronic
chr17:1337059(-) A-I      intronic
chr17:1337832(-) A-I      intronic
chr17:1337842(-) A-I      intronic
chr17:1337851(-) A-I      intronic
chr17:1337911(-) A-I      intronic
chr17:1338001(-) A-I      intronic
chr17:1354705(-) A-I      intronic
chr17:1346333(-) A-I      intronic
chr17:1346341(-) A-I      intronic
chr17:1346383(-) A-I      intronic
chr17:1346393(-) A-I      intronic
chr17:1335806(-) A-I      intronic
chr17:1333470(-) A-I      intronic
chr17:1338020(-) A-I      intronic
chr17:1338051(-) A-I      intronic
chr17:1338351(-) A-I      intronic
chr17:1338456(-) A-I      intronic
chr17:1338466(-) A-I      intronic
chr17:1339060(-) A-I      intronic
chr17:1339068(-) A-I      intronic
chr17:1341010(-) A-I      intronic
chr17:1341053(-) A-I      intronic
chr17:1341085(-) A-I      intronic
chr17:1327499(-) A-I      intronic
chr17:1327517(-) A-I      intronic
chr17:1341086(-) A-I      intronic
chr17:1341526(-) A-I      intronic
chr17:1342209(-) A-I      intronic
chr17:1342306(-) A-I      intronic
chr17:1357301(-) A-I      intronic
chr17:1357252(-) A-I      intronic
chr17:1357101(-) A-I      intronic
chr17:1356345(-) A-I      intronic
chr17:1356206(-) A-I      intronic
chr17:1356001(-) A-I      intronic
chr17:1355936(-) A-I      intronic
chr17:1355914(-) A-I      intronic
chr17:1354799(-) A-I      intronic
chr17:1346030(-) A-I      intronic
chr17:1354443(-) A-I      intronic
chr17:1342442(-) A-I      intronic
chr17:1328059(-) A-I      intronic
chr17:1328208(-) A-I      intronic
chr17:1328419(-) A-I      intronic
chr17:1328481(-) A-I      intronic
chr17:1328495(-) A-I      intronic
chr17:1328555(-) A-I      intronic
chr17:1335971(-) A-I      intronic
chr17:1328562(-) A-I      intronic
chr17:1328833(-) A-I      intronic
chr17:1329240(-) A-I      intronic
chr17:1329241(-) A-I      intronic
chr17:1329249(-) A-I      intronic
chr17:1329280(-) A-I      intronic
chr17:1329833(-) A-I      intronic
chr17:1329852(-) A-I      intronic
chr17:1329906(-) A-I      intronic
chr17:1330009(-) A-I      intronic
chr17:1330048(-) A-I      intronic
chr17:1342501(-) A-I      intronic
chr17:1342522(-) A-I      intronic
chr17:1342528(-) A-I      intronic
chr17:1342554(-) A-I      intronic
chr17:1342566(-) A-I      intronic
chr17:1342571(-) A-I      intronic
chr17:1343055(-) A-I      intronic
chr17:1343229(-) A-I      intronic
chr17:1343359(-) A-I      intronic
chr17:1343404(-) A-I      intronic
chr17:1343412(-) A-I      intronic
chr17:1343646(-) A-I      intronic
chr17:1343650(-) A-I      intronic
chr17:1344172(-) A-I      intronic
chr17:1330148(-) A-I      intronic
chr17:1330152(-) A-I      intronic
chr17:1330643(-) A-I      intronic
chr17:1330666(-) A-I      intronic
chr17:1330720(-) A-I      intronic
chr17:1330803(-) A-I      intronic
chr17:1331447(-) A-I      intronic
chr17:1331541(-) A-I      intronic
chr17:1331577(-) A-I      intronic
chr17:1331595(-) A-I      intronic
chr17:1331644(-) A-I      intronic
chr17:1331653(-) A-I      intronic
chr17:1331684(-) A-I      intronic
chr17:1331929(-) A-I      intronic
chr17:1331942(-) A-I      intronic
chr17:1331956(-) A-I      intronic
chr17:1331964(-) A-I      intronic
chr17:1332006(-) A-I      intronic
chr17:1332022(-) A-I      intronic
chr17:1332036(-) A-I      intronic
chr17:1332684(-) A-I      intronic
chr17:1332705(-) A-I      intronic
chr17:1333119(-) A-I      intronic
chr17:1333526(-) A-I      intronic
chr17:1333565(-) A-I      intronic
chr17:1333910(-) A-I      intronic
chr17:1344192(-) A-I      intronic
chr17:1325595(-) A-I      3'UTR
chr17:1325662(-) A-I      3'UTR
chr17:1325459(-) A-I      3'UTR
chr17:1325569(-) A-I      3'UTR
chr17:1325663(-) A-I      3'UTR
chr17:1325636(-) A-I      3'UTR
chr17:1325451(-) A-I      3'UTR
chr17:1325730(-) A-I      3'UTR
chr17:1325448(-) A-I      3'UTR
chr17:1325463(-) A-I      3'UTR
chr17:1325622(-) A-I      3'UTR
chr17:1325530(-) A-I      3'UTR
chr17:1325596(-) A-I      3'UTR
chr17:1325729(-) A-I      3'UTR
chr17:1325686(-) A-I      3'UTR
chr17:1343675(-) A-I      intronic
chr17:1347670(-) A-I      intronic
chr17:1351048(-) A-I      intronic
chr17:1355952(-) A-I      intronic
chr17:1342361(-) A-I      intronic
chr17:1345548(-) A-I      intronic
chr17:1332414(-) A-I      intronic
chr17:1334790(-) A-I      intronic
chr17:1354695(-) A-I      intronic
chr17:1349278(-) A-I      intronic
chr17:1338542(-) A-I      intronic
chr17:1346345(-) A-I      intronic
chr17:1343649(-) A-I      intronic
chr17:1332708(-) A-I      intronic
chr17:1355998(-) A-I      intronic
chr17:1336898(-) A-I      intronic
chr17:1347352(-) A-I      intronic
chr17:1330698(-) A-I      intronic
chr17:1328142(-) A-I      intronic
chr17:1329915(-) A-I      intronic
chr17:1333192(-) A-I      intronic
chr17:1335682(-) A-I      intronic
chr17:1351674(-) A-I      intronic
chr17:1334924(-) A-I      intronic
chr17:1329859(-) A-I      intronic
chr17:1339089(-) A-I      intronic
chr17:1345589(-) A-I      intronic
chr17:1332268(-) A-I      intronic
chr17:1356392(-) A-I      intronic
chr17:1351090(-) A-I      intronic
chr17:1344103(-) A-I      intronic
chr17:1343471(-) A-I      intronic
chr17:1330775(-) A-I      intronic
chr17:1334240(-) A-I      intronic
chr17:1328275(-) A-I      intronic
chr17:1330057(-) A-I      intronic
chr17:1335517(-) A-I      intronic
chr17:1341239(-) A-I      intronic
chr17:1331124(-) A-I      intronic
chr17:1334287(-) A-I      intronic
chr17:1343894(-) A-I      intronic
chr17:1332732(-) A-I      intronic
chr17:1355151(-) A-I      intronic
chr17:1338625(-) A-I      intronic
chr17:1354058(-) A-I      intronic
chr17:1346542(-) A-I      intronic
chr17:1328827(-) A-I      intronic
chr17:1331997(-) A-I      intronic
chr17:1337955(-) A-I      intronic
chr17:1355919(-) A-I      intronic
chr17:1345587(-) A-I      intronic
chr17:1342292(-) A-I      intronic
chr17:1348186(-) A-I      intronic
chr17:1327540(-) A-I      intronic
chr17:1346013(-) A-I      intronic
chr17:1351773(-) A-I      intronic
chr17:1342393(-) A-I      intronic
chr17:1330631(-) A-I      intronic
chr17:1343351(-) A-I      intronic
chr17:1337267(-) A-I      intronic
chr17:1351184(-) A-I      intronic
chr17:1330473(-) A-I      intronic
chr17:1355962(-) A-I      intronic
chr17:1327457(-) A-I      intronic
chr17:1333079(-) A-I      intronic
chr17:1333561(-) A-I      intronic
chr17:1351183(-) A-I      intronic
chr17:1333614(-) A-I      intronic
chr17:1354798(-) A-I      intronic
chr17:1343015(-) A-I      intronic
chr17:1346637(-) A-I      intronic
chr17:1346272(-) A-I      intronic
chr17:1328160(-) A-I      intronic
chr17:1346211(-) A-I      intronic
chr17:1332961(-) A-I      intronic
chr17:1346639(-) A-I      intronic
chr17:1348075(-) A-I      intronic
chr17:1329795(-) A-I      intronic
chr17:1347400(-) A-I      intronic
chr17:1342886(-) A-I      intronic
chr17:1327423(-) A-I      intronic
chr17:1342899(-) A-I      intronic
chr17:1338518(-) A-I      intronic
chr17:1329407(-) A-I      intronic
chr17:1332841(-) A-I      intronic
chr17:1338613(-) A-I      intronic
chr17:1328659(-) A-I      intronic
chr17:1337929(-) A-I      intronic
chr17:1328658(-) A-I      intronic
chr17:1343075(-) A-I      intronic
chr17:1331690(-) A-I      intronic
chr17:1331199(-) A-I      intronic
chr17:1333212(-) A-I      intronic
chr17:1354640(-) A-I      intronic
chr17:1334357(-) A-I      intronic
chr17:1355838(-) A-I      intronic
chr17:1344459(-) A-I      intronic
chr17:1333815(-) A-I      intronic
chr17:1354621(-) A-I      intronic
chr17:1338389(-) A-I      intronic
chr17:1353613(-) A-I      intronic
chr17:1345056(-) A-I      intronic
chr17:1325462(-) A-I      3'UTR
chr17:1355902(-) A-I      intronic
chr17:1333036(-) A-I      intronic
chr17:1328698(-) A-I      intronic
chr17:1325629(-) A-I      3'UTR
chr17:1328261(-) A-I      intronic
chr17:1343244(-) A-I      intronic
chr17:1337872(-) A-I      intronic
chr17:1355916(-) A-I      intronic
chr17:1343674(-) A-I      intronic
chr17:1342260(-) A-I      intronic
chr17:1344341(-) A-I      intronic
chr17:1336986(-) A-I      intronic
chr17:1342668(-) A-I      intronic
chr17:1334771(-) A-I      intronic
chr17:1350892(-) A-I      intronic
chr17:1338416(-) A-I      intronic
chr17:1334917(-) A-I      intronic
chr17:1332421(-) A-I      intronic
chr17:1332972(-) A-I      intronic
chr17:1339059(-) A-I      intronic
chr17:1329978(-) A-I      intronic
chr17:1344148(-) A-I      intronic
chr17:1343202(-) A-I      intronic
chr17:1347701(-) A-I      intronic
chr17:1334759(-) A-I      intronic
chr17:1333078(-) A-I      intronic
chr17:1356213(-) A-I      intronic
chr17:1354815(-) A-I      intronic
chr17:1341112(-) A-I      intronic
chr17:1346061(-) A-I      intronic
chr17:1347699(-) A-I      intronic
chr17:1336929(-) A-I      intronic
chr17:1332304(-) A-I      intronic
chr17:1333450(-) A-I      intronic
chr17:1333053(-) A-I      intronic
chr17:1329966(-) A-I      intronic
chr17:1348198(-) A-I      intronic
chr17:1333035(-) A-I      intronic
chr17:1330996(-) A-I      intronic
chr17:1327531(-) A-I      intronic
chr17:1344399(-) A-I      intronic
chr17:1328681(-) A-I      intronic
chr17:1333435(-) A-I      intronic
chr17:1343212(-) A-I      intronic
chr17:1347568(-) A-I      intronic
chr17:1347511(-) A-I      intronic
chr17:1347700(-) A-I      intronic
chr17:1351084(-) A-I      intronic
chr17:1333105(-) A-I      intronic
chr17:1347363(-) A-I      intronic
chr17:1331133(-) A-I      intronic
chr17:1337258(-) A-I      intronic
chr17:1336747(-) A-I      intronic
chr17:1344683(-) A-I      intronic
chr17:1331982(-) A-I      intronic
chr17:1339063(-) A-I      intronic
chr17:1343909(-) A-I      intronic
chr17:1327654(-) A-I      intronic
chr17:1344164(-) A-I      intronic
chr17:1333115(-) A-I      intronic
chr17:1332954(-) A-I      intronic
chr17:1344116(-) A-I      intronic
chr17:1331182(-) A-I      intronic
chr17:1333156(-) A-I      intronic
chr17:1329781(-) A-I      intronic
chr17:1351671(-) A-I      intronic
chr17:1343988(-) A-I      intronic
chr17:1344715(-) A-I      intronic
chr17:1354698(-) A-I      intronic
chr17:1354693(-) A-I      intronic
chr17:1327650(-) A-I      intronic
chr17:1355179(-) A-I      intronic
chr17:1343061(-) A-I      intronic
chr17:1327626(-) A-I      intronic
chr17:1357774(-) A-I      intronic
chr17:1344446(-) A-I      intronic
chr17:1330524(-) A-I      intronic
chr17:1331107(-) A-I      intronic
chr17:1337994(-) A-I      intronic
chr17:1353455(-) A-I      intronic
chr17:1355825(-) A-I      intronic
chr17:1352144(-) A-I      intronic
chr17:1336989(-) A-I      intronic
chr17:1344445(-) A-I      intronic
chr17:1337211(-) A-I      intronic
chr17:1355997(-) A-I      intronic
chr17:1338619(-) A-I      intronic
chr17:1354230(-) A-I      intronic
chr17:1343337(-) A-I      intronic
chr17:1347025(-) A-I      intronic
chr17:1332975(-) A-I      intronic
chr17:1335659(-) A-I      intronic
chr17:1333140(-) A-I      intronic
chr17:1351675(-) A-I      intronic
chr17:1330653(-) A-I      intronic
chr17:1328623(-) A-I      intronic
chr17:1327472(-) A-I      intronic
chr17:1333365(-) A-I      intronic
chr17:1327615(-) A-I      intronic
chr17:1347371(-) A-I      intronic
chr17:1343196(-) A-I      intronic
chr17:1353634(-) A-I      intronic
chr17:1347451(-) A-I      intronic
chr17:1346070(-) A-I      intronic
chr17:1357712(-) A-I      intronic
chr17:1356045(-) A-I      intronic
chr17:1343817(-) A-I      intronic
chr17:1343758(-) A-I      intronic
chr17:1345998(-) A-I      intronic
chr17:1343054(-) A-I      intronic
chr17:1331683(-) A-I      intronic
chr17:1338482(-) A-I      intronic
chr17:1333471(-) A-I      intronic
chr17:1347403(-) A-I      intronic
chr17:1338588(-) A-I      intronic
chr17:1329908(-) A-I      intronic
chr17:1328180(-) A-I      intronic
chr17:1344950(-) A-I      intronic
chr17:1354663(-) A-I      intronic
chr17:1354776(-) A-I      intronic
chr17:1343042(-) A-I      intronic
chr17:1328690(-) A-I      intronic
chr17:1354622(-) A-I      intronic
chr17:1356155(-) A-I      intronic
chr17:1334772(-) A-I      intronic
chr17:1344688(-) A-I      intronic
chr17:1338554(-) A-I      intronic
chr17:1346555(-) A-I      intronic
chr17:1332706(-) A-I      intronic
chr17:1329876(-) A-I      intronic
chr17:1329992(-) A-I      intronic
chr17:1333615(-) A-I      intronic
chr17:1351854(-) A-I      intronic
chr17:1353242(-) A-I      intronic
chr17:1328069(-) A-I      intronic
chr17:1327537(-) A-I      intronic
chr17:1349928(-) A-I      intronic
chr17:1355935(-) A-I      intronic
chr17:1341696(-) A-I      intronic
chr17:1330502(-) A-I      intronic
chr17:1343962(-) A-I      intronic
chr17:1341562(-) A-I      intronic
chr17:1337289(-) A-I      intronic
chr17:1350024(-) A-I      intronic
chr17:1328548(-) A-I      intronic
chr17:1339096(-) A-I      intronic
chr17:1328560(-) A-I      intronic
chr17:1343950(-) A-I      intronic
chr17:1338618(-) A-I      intronic
chr17:1353637(-) A-I      intronic
chr17:1328558(-) A-I      intronic
chr17:1328383(-) A-I      intronic
chr17:1351782(-) A-I      intronic
chr17:1345570(-) A-I      intronic
chr17:1344191(-) A-I      intronic
chr17:1333163(-) A-I      intronic
chr17:1348355(-) A-I      intronic
chr17:1352134(-) A-I      intronic
chr17:1333127(-) A-I      intronic
chr17:1346065(-) A-I      intronic
chr17:1346302(-) A-I      intronic
chr17:1354950(-) A-I      intronic
chr17:1336732(-) A-I      intronic
chr17:1335040(-) A-I      intronic
chr17:1332976(-) A-I      intronic
chr17:1337977(-) A-I      intronic
chr17:1332236(-) A-I      intronic
chr17:1333188(-) A-I      intronic
chr17:1337928(-) A-I      intronic
chr17:1352263(-) A-I      intronic
chr17:1346190(-) A-I      intronic
chr17:1333132(-) A-I      intronic
chr17:1333477(-) A-I      intronic
chr17:1334262(-) A-I      intronic
chr17:1354727(-) A-I      intronic
chr17:1351795(-) A-I      intronic
chr17:1347215(-) A-I      intronic
chr17:1350912(-) A-I      intronic
chr17:1328853(-) A-I      intronic
chr17:1345217(-) A-I      intronic
chr17:1351026(-) A-I      intronic
chr17:1343349(-) A-I      intronic
chr17:1334997(-) A-I      intronic
chr17:1351049(-) A-I      intronic
chr17:1333762(-) A-I      intronic
chr17:1350030(-) A-I      intronic
chr17:1328213(-) A-I      intronic
chr17:1342908(-) A-I      intronic
chr17:1333503(-) A-I      intronic
chr17:1333542(-) A-I      intronic
chr17:1333054(-) A-I      intronic
chr17:1329239(-) A-I      intronic
chr17:1341623(-) A-I      intronic
chr17:1328251(-) A-I      intronic
chr17:1355837(-) A-I      intronic
chr17:1336981(-) A-I      intronic
chr17:1334172(-) A-I      intronic
chr17:1353558(-) A-I      intronic
chr17:1346068(-) A-I      intronic
chr17:1337197(-) A-I      intronic
chr17:1345238(-) A-I      intronic
chr17:1330269(-) A-I      intronic
chr17:1329807(-) A-I      intronic
chr17:1333476(-) A-I      intronic
chr17:1337953(-) A-I      intronic
chr17:1336983(-) A-I      intronic
chr17:1354689(-) A-I      intronic
chr17:1353328(-) A-I      intronic
chr17:1351039(-) A-I      intronic
chr17:1335538(-) A-I      intronic
chr17:1334826(-) A-I      intronic
chr17:1345423(-) A-I      intronic
chr17:1341538(-) A-I      intronic
chr17:1356154(-) A-I      intronic
chr17:1333854(-) A-I      intronic
chr17:1341603(-) A-I      intronic
chr17:1343243(-) A-I      intronic
chr17:1328857(-) A-I      intronic
chr17:1355890(-) A-I      intronic
chr17:1354752(-) A-I      intronic
chr17:1333057(-) A-I      intronic
chr17:1334275(-) A-I      intronic
chr17:1346384(-) A-I      intronic
chr17:1347874(-) A-I      intronic
chr17:1344358(-) A-I      intronic
chr17:1335005(-) A-I      intronic
chr17:1333002(-) A-I      intronic
chr17:1351027(-) A-I      intronic
chr17:1331606(-) A-I      intronic
chr17:1327446(-) A-I      intronic
chr17:1332277(-) A-I      intronic
chr17:1333545(-) A-I      intronic
chr17:1343203(-) A-I      intronic
chr17:1343731(-) A-I      intronic
chr17:1354052(-) A-I      intronic
chr17:1338068(-) A-I      intronic
chr17:1354662(-) A-I      intronic
chr17:1344604(-) A-I      intronic
chr17:1341602(-) A-I      intronic
chr17:1342625(-) A-I      intronic
chr17:1341497(-) A-I      intronic
chr17:1329856(-) A-I      intronic
chr17:1341496(-) A-I      intronic
chr17:1344154(-) A-I      intronic
chr17:1332843(-) A-I      intronic
chr17:1346597(-) A-I      intronic
chr17:1343882(-) A-I      intronic
chr17:1328222(-) A-I      intronic
chr17:1356035(-) A-I      intronic
chr17:1342705(-) A-I      intronic
chr17:1343481(-) A-I      intronic
chr17:1328805(-) A-I      intronic
chr17:1334238(-) A-I      intronic
chr17:1354641(-) A-I      intronic
chr17:1355157(-) A-I      intronic
chr17:1331200(-) A-I      intronic
chr17:1342486(-) A-I      intronic
chr17:1328780(-) A-I      intronic
chr17:1330890(-) A-I      intronic
chr17:1343750(-) A-I      intronic
chr17:1332308(-) A-I      intronic
chr17:1343484(-) A-I      intronic
chr17:1344603(-) A-I      intronic
chr17:1346452(-) A-I      intronic
chr17:1328480(-) A-I      intronic
chr17:1335066(-) A-I      intronic
chr17:1353933(-) A-I      intronic
chr17:1346349(-) A-I      intronic
chr17:1341232(-) A-I      intronic
chr17:1328299(-) A-I      intronic
chr17:1351738(-) A-I      intronic
chr17:1351089(-) A-I      intronic
chr17:1343700(-) A-I      intronic
chr17:1343681(-) A-I      intronic
chr17:1337210(-) A-I      intronic
chr17:1347797(-) A-I      intronic
chr17:1333436(-) A-I      intronic
chr17:1335020(-) A-I      intronic
chr17:1351878(-) A-I      intronic
chr17:1351817(-) A-I      intronic
chr17:1335010(-) A-I      intronic
chr17:1328551(-) A-I      intronic
chr17:1338038(-) A-I      intronic
chr17:1333779(-) A-I      intronic
chr17:1355984(-) A-I      intronic
chr17:1331607(-) A-I      intronic
chr17:1328421(-) A-I      intronic
chr17:1345057(-) A-I      intronic
chr17:1343889(-) A-I      intronic
chr17:1341246(-) A-I      intronic
chr17:1342473(-) A-I      intronic
chr17:1353643(-) A-I      intronic
chr17:1333499(-) A-I      intronic
chr17:1331021(-) A-I      intronic
chr17:1325626(-) A-I      3'UTR
chr17:1325534(-) A-I      3'UTR
chr17:1325450(-) A-I      3'UTR
chr17:1325586(-) A-I      3'UTR
chr17:1325658(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CRK
chr17:1333476(-) A-I intron -    22327324
chr17:1325626(-) A-G exon 3'UTR    22484847
chr17:1328222(-) A-G intron -    22484847
chr17:1328251(-) A-G intron -    22484847
chr17:1331690(-) A-G intron -    22484847
chr17:1332421(-) A-G intron -    22484847
chr17:1333132(-) A-G intron -    22484847
chr17:1343042(-) A-G intron -    22484847
chr17:1343196(-) A-G intron -    22484847
chr17:1344191(-) A-G intron -    22484847
chr17:1345056(-) A-G intron -    22484847
chr17:1345057(-) A-G intron -    22484847
chr17:1345587(-) A-G intron -    22484847
chr17:1345998(-) A-G intron -    22484847
chr17:1346013(-) A-G intron -    22484847
chr17:1347400(-) A-G intron -    22484847
chr17:1351026(-) A-G intron -    22484847
chr17:1351027(-) A-G intron -    22484847
chr17:1351039(-) A-G intron -    22484847
chr17:1351048(-) A-G intron -    22484847
chr17:1351084(-) A-G intron -    22484847
chr17:1351738(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CRK
chr17:1324346-1324347(-) m6A 3'UTR       24284625//24981863//22608085
chr17:1324464-1324465(-) m6A 3'UTR       24981863//22608085
chr17:1324527-1324528(-) m6A 3'UTR       24981863
chr17:1324825-1324826(-) m6A 3'UTR       26404942
chr17:1324893-1324894(-) m6A 3'UTR       26404942
chr17:1325210-1325211(-) m6A 3'UTR       26404942
chr17:1325248-1325249(-) m6A 3'UTR       26404942
chr17:1325257-1325258(-) m6A 3'UTR       26404942
chr17:1325484-1325485(-) m6A 3'UTR       24981863//27773535
chr17:1325651-1325652(-) m6A 3'UTR       24981863
chr17:1326182-1326183(-) m6A 3'UTR       24284625//24209618//27773535//22608085
chr17:1326270-1326271(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr17:1326400-1326401(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr17:1326423-1326424(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr17:1326486-1326487(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:1326494-1326495(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:1326621-1326622(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr17:1326663-1326664(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1326668-1326669(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:1326773-1326774(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//26404942//27773535//22608085
chr17:1326816-1326817(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//22608085
chr17:1339930-1339931(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:1340117-1340118(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:1340169-1340170(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr17:1340202-1340203(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr17:1340220-1340221(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr17:1340342-1340343(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:1340361-1340362(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:1340432-1340433(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr17:1359250-1359251(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:1359274-1359275(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:1359295-1359296(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:1359499-1359500(-) m6A 5'UTR//intron       24209618//24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-223-5p
Exosome Primary dendritic cells     21505438
Exosome Breast milk     22211110
Exosome Plasma     23663360
Exosome B cell lymphoma cell lines|EBV-transformed lymphoblastoid B cells     25242326
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
CRK
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-223-5p
Interactor2: CRK

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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