Detail Information

Basic Information:


  VIRBase ID:  

HHID00048919

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-199b-5p:           CNST:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-199b-5p CNST
miRBase
Accession/Entrez ID
MIMAT0000263 163882
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - C1orf71//PPP1R64

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-199b-5p
rs1024465078 chr9:128244786    C/T
rs1052574238 chr9:128244788    G/A
rs1399178030 chr9:128244805    G/A
rs777889185 chr9:128244784    A/G
rs1176138186 chr9:128244804    G/A
rs892551318 chr9:128244803    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CNST
chr1:246757873(+) A-I      intronic
chr1:246785150(+) A-I      intronic
chr1:246757901(+) A-I      intronic
chr1:246826944(+) A-I      intronic
chr1:246824492(+) A-I      intronic
chr1:246823838(+) A-I      intronic
chr1:246823829(+) A-I      intronic
chr1:246823821(+) A-I      intronic
chr1:246823814(+) A-I      intronic
chr1:246826833(+) A-I      intronic
chr1:246826911(+) A-I      intronic
chr1:246823813(+) A-I      intronic
chr1:246823795(+) A-I      intronic
chr1:246823789(+) A-I      intronic
chr1:246823773(+) A-I      intronic
chr1:246823772(+) A-I      intronic
chr1:246828517(+) A-I      intronic
chr1:246828510(+) A-I      intronic
chr1:246828518(+) A-I      intronic
chr1:246828526(+) A-I      intronic
chr1:246825790(+) A-I      intronic
chr1:246823764(+) A-I      intronic
chr1:246809471(+) A-I      intronic
chr1:246809394(+) A-I      intronic
chr1:246809384(+) A-I      intronic
chr1:246793234(+) A-I      intronic
chr1:246828532(+) A-I      intronic
chr1:246809422(+) A-I      intronic
chr1:246786867(+) A-I      intronic
chr1:246786858(+) A-I      intronic
chr1:246786853(+) A-I      intronic
chr1:246786821(+) A-I      intronic
chr1:246826903(+) A-I      intronic
chr1:246826891(+) A-I      intronic
chr1:246826890(+) A-I      intronic
chr1:246826872(+) A-I      intronic
chr1:246826823(+) A-I      intronic
chr1:246826818(+) A-I      intronic
chr1:246826810(+) A-I      intronic
chr1:246826548(+) A-I      intronic
chr1:246824493(+) A-I      intronic
chr1:246826503(+) A-I      intronic
chr1:246828471(+) A-I      intronic
chr1:246775568(+) A-I      intronic
chr1:246826501(+) A-I      intronic
chr1:246826486(+) A-I      intronic
chr1:246755740(+) A-I      intronic
chr1:246755745(+) A-I      intronic
chr1:246775567(+) A-I      intronic
chr1:246775526(+) A-I      intronic
chr1:246775524(+) A-I      intronic
chr1:246793217(+) A-I      intronic
chr1:246824500(+) A-I      intronic
chr1:246826921(+) A-I      intronic
chr1:246824584(+) A-I      intronic
chr1:246825832(+) A-I      intronic
chr1:246826495(+) A-I      intronic
chr1:246826507(+) A-I      intronic
chr1:246826544(+) A-I      intronic
chr1:246826579(+) A-I      intronic
chr1:246826809(+) A-I      intronic
chr1:246826819(+) A-I      intronic
chr1:246826865(+) A-I      intronic
chr1:246826867(+) A-I      intronic
chr1:246826935(+) A-I      intronic
chr1:246826962(+) A-I      intronic
chr1:246826967(+) A-I      intronic
chr1:246826974(+) A-I      intronic
chr1:246826987(+) A-I      intronic
chr1:246826991(+) A-I      intronic
chr1:246827021(+) A-I      intronic
chr1:246827046(+) A-I      intronic
chr1:246827751(+) A-I      intronic
chr1:246827910(+) A-I      intronic
chr1:246827913(+) A-I      intronic
chr1:246757911(+) A-I      intronic
chr1:246827750(+) A-I      intronic
chr1:246732275(+) A-I      intronic
chr1:246732288(+) A-I      intronic
chr1:246732301(+) A-I      intronic
chr1:246734580(+) A-I      intronic
chr1:246735000(+) A-I      intronic
chr1:246736117(+) A-I      intronic
chr1:246736127(+) A-I      intronic
chr1:246737411(+) A-I      intronic
chr1:246737519(+) A-I      intronic
chr1:246737582(+) A-I      intronic
chr1:246739312(+) A-I      intronic
chr1:246739361(+) A-I      intronic
chr1:246739868(+) A-I      intronic
chr1:246739891(+) A-I      intronic
chr1:246740039(+) A-I      intronic
chr1:246740048(+) A-I      intronic
chr1:246742887(+) A-I      intronic
chr1:246742893(+) A-I      intronic
chr1:246742937(+) A-I      intronic
chr1:246742972(+) A-I      intronic
chr1:246744142(+) A-I      intronic
chr1:246747360(+) A-I      intronic
chr1:246747376(+) A-I      intronic
chr1:246747464(+) A-I      intronic
chr1:246749162(+) A-I      intronic
chr1:246755679(+) A-I      intronic
chr1:246755710(+) A-I      intronic
chr1:246755734(+) A-I      intronic
chr1:246755735(+) A-I      intronic
chr1:246755739(+) A-I      intronic
chr1:246756694(+) A-I      intronic
chr1:246756782(+) A-I      intronic
chr1:246756835(+) A-I      intronic
chr1:246756836(+) A-I      intronic
chr1:246757809(+) A-I      intronic
chr1:246757913(+) A-I      intronic
chr1:246757915(+) A-I      intronic
chr1:246757940(+) A-I      intronic
chr1:246757956(+) A-I      intronic
chr1:246757960(+) A-I      intronic
chr1:246764378(+) A-I      intronic
chr1:246764397(+) A-I      intronic
chr1:246764500(+) A-I      intronic
chr1:246764513(+) A-I      intronic
chr1:246767381(+) A-I      intronic
chr1:246767387(+) A-I      intronic
chr1:246824469(+) A-I      intronic
chr1:246767454(+) A-I      intronic
chr1:246767565(+) A-I      intronic
chr1:246768088(+) A-I      intronic
chr1:246768137(+) A-I      intronic
chr1:246768173(+) A-I      intronic
chr1:246773330(+) A-I      intronic
chr1:246773382(+) A-I      intronic
chr1:246773397(+) A-I      intronic
chr1:246773457(+) A-I      intronic
chr1:246773589(+) A-I      intronic
chr1:246775584(+) A-I      intronic
chr1:246775629(+) A-I      intronic
chr1:246775779(+) A-I      intronic
chr1:246775956(+) A-I      intronic
chr1:246775964(+) A-I      intronic
chr1:246775973(+) A-I      intronic
chr1:246778533(+) A-I      intronic
chr1:246778582(+) A-I      intronic
chr1:246778617(+) A-I      intronic
chr1:246779101(+) A-I      intronic
chr1:246779145(+) A-I      intronic
chr1:246779192(+) A-I      intronic
chr1:246779912(+) A-I      intronic
chr1:246780054(+) A-I      intronic
chr1:246780057(+) A-I      intronic
chr1:246785087(+) A-I      intronic
chr1:246785095(+) A-I      intronic
chr1:246785101(+) A-I      intronic
chr1:246785126(+) A-I      intronic
chr1:246785135(+) A-I      intronic
chr1:246785136(+) A-I      intronic
chr1:246785144(+) A-I      intronic
chr1:246785168(+) A-I      intronic
chr1:246786145(+) A-I      intronic
chr1:246786149(+) A-I      intronic
chr1:246786157(+) A-I      intronic
chr1:246786187(+) A-I      intronic
chr1:246786219(+) A-I      intronic
chr1:246786305(+) A-I      intronic
chr1:246786325(+) A-I      intronic
chr1:246786334(+) A-I      intronic
chr1:246786345(+) A-I      intronic
chr1:246786360(+) A-I      intronic
chr1:246786393(+) A-I      intronic
chr1:246786799(+) A-I      intronic
chr1:246786804(+) A-I      intronic
chr1:246786847(+) A-I      intronic
chr1:246786868(+) A-I      intronic
chr1:246786877(+) A-I      intronic
chr1:246786949(+) A-I      intronic
chr1:246786953(+) A-I      intronic
chr1:246786970(+) A-I      intronic
chr1:246786989(+) A-I      intronic
chr1:246788139(+) A-I      intronic
chr1:246788199(+) A-I      intronic
chr1:246788798(+) A-I      intronic
chr1:246788958(+) A-I      intronic
chr1:246788983(+) A-I      intronic
chr1:246788996(+) A-I      intronic
chr1:246793085(+) A-I      intronic
chr1:246793097(+) A-I      intronic
chr1:246793098(+) A-I      intronic
chr1:246793127(+) A-I      intronic
chr1:246793160(+) A-I      intronic
chr1:246793175(+) A-I      intronic
chr1:246793191(+) A-I      intronic
chr1:246793310(+) A-I      intronic
chr1:246806217(+) A-I      intronic
chr1:246806225(+) A-I      intronic
chr1:246807447(+) A-I      intronic
chr1:246807597(+) A-I      intronic
chr1:246808914(+) A-I      intronic
chr1:246808936(+) A-I      intronic
chr1:246808960(+) A-I      intronic
chr1:246808968(+) A-I      intronic
chr1:246808972(+) A-I      intronic
chr1:246809409(+) A-I      intronic
chr1:246809461(+) A-I      intronic
chr1:246809883(+) A-I      intronic
chr1:246809982(+) A-I      intronic
chr1:246816060(+) A-I      intronic
chr1:246816226(+) A-I      intronic
chr1:246816227(+) A-I      intronic
chr1:246820133(+) A-I      intronic
chr1:246823750(+) A-I      intronic
chr1:246823815(+) A-I      intronic
chr1:246823818(+) A-I      intronic
chr1:246823842(+) A-I      intronic
chr1:246823867(+) A-I      intronic
chr1:246823907(+) A-I      intronic
chr1:246823920(+) A-I      intronic
chr1:246823923(+) A-I      intronic
chr1:246823933(+) A-I      intronic
chr1:246823938(+) A-I      intronic
chr1:246823966(+) A-I      intronic
chr1:246828607(+) A-I      intronic
chr1:246828560(+) A-I      intronic
chr1:246828511(+) A-I      intronic
chr1:246828507(+) A-I      intronic
chr1:246824346(+) A-I      intronic
chr1:246824371(+) A-I      intronic
chr1:246824411(+) A-I      intronic
chr1:246828501(+) A-I      intronic
chr1:246828438(+) A-I      intronic
chr1:246827990(+) A-I      intronic
chr1:246824438(+) A-I      intronic
chr1:246824667(+) A-I      intronic
chr1:246825770(+) A-I      intronic
chr1:246788217(+) A-I      intronic
chr1:246779125(+) A-I      intronic
chr1:246825890(+) A-I      intronic
chr1:246786151(+) A-I      intronic
chr1:246823766(+) A-I      intronic
chr1:246824546(+) A-I      intronic
chr1:246787285(+) A-I      intronic
chr1:246825967(+) A-I      intronic
chr1:246820211(+) A-I      intronic
chr1:246744112(+) A-I      intronic
chr1:246823985(+) A-I      intronic
chr1:246824292(+) A-I      intronic
chr1:246776144(+) A-I      intronic
chr1:246731446(+) A-I      intronic
chr1:246823930(+) A-I      intronic
chr1:246826787(+) A-I      intronic
chr1:246786271(+) A-I      intronic
chr1:246757096(+) A-I      intronic
chr1:246776189(+) A-I      intronic
chr1:246824000(+) A-I      intronic
chr1:246779845(+) A-I      intronic
chr1:246785257(+) A-I      intronic
chr1:246786780(+) A-I      intronic
chr1:246779986(+) A-I      intronic
chr1:246823803(+) A-I      intronic
chr1:246757308(+) A-I      intronic
chr1:246764932(+) A-I      intronic
chr1:246786796(+) A-I      intronic
chr1:246793311(+) A-I      intronic
chr1:246787096(+) A-I      intronic
chr1:246739927(+) A-I      intronic
chr1:246785176(+) A-I      intronic
chr1:246816051(+) A-I      intronic
chr1:246824293(+) A-I      intronic
chr1:246737764(+) A-I      intronic
chr1:246788156(+) A-I      intronic
chr1:246824603(+) A-I      intronic
chr1:246825953(+) A-I      intronic
chr1:246807448(+) A-I      intronic
chr1:246826479(+) A-I      intronic
chr1:246787173(+) A-I      intronic
chr1:246806291(+) A-I      intronic
chr1:246809327(+) A-I      intronic
chr1:246779636(+) A-I      intronic
chr1:246826997(+) A-I      intronic
chr1:246786143(+) A-I      intronic
chr1:246823878(+) A-I      intronic
chr1:246758046(+) A-I      intronic
chr1:246786943(+) A-I      intronic
chr1:246826373(+) A-I      intronic
chr1:246826492(+) A-I      intronic
chr1:246806357(+) A-I      intronic
chr1:246823786(+) A-I      intronic
chr1:246786265(+) A-I      intronic
chr1:246786872(+) A-I      intronic
chr1:246779749(+) A-I      intronic
chr1:246826496(+) A-I      intronic
chr1:246749283(+) A-I      intronic
chr1:246764407(+) A-I      intronic
chr1:246786852(+) A-I      intronic
chr1:246757852(+) A-I      intronic
chr1:246823754(+) A-I      intronic
chr1:246786917(+) A-I      intronic
chr1:246786925(+) A-I      intronic
chr1:246826497(+) A-I      intronic
chr1:246825808(+) A-I      intronic
chr1:246787078(+) A-I      intronic
chr1:246824663(+) A-I      intronic
chr1:246826584(+) A-I      intronic
chr1:246749251(+) A-I      intronic
chr1:246824552(+) A-I      intronic
chr1:246786844(+) A-I      intronic
chr1:246827030(+) A-I      intronic
chr1:246823925(+) A-I      intronic
chr1:246742892(+) A-I      intronic
chr1:246764447(+) A-I      intronic
chr1:246826899(+) A-I      intronic
chr1:246823877(+) A-I      intronic
chr1:246826886(+) A-I      intronic
chr1:246764448(+) A-I      intronic
chr1:246814097(+) A-I      intronic
chr1:246758021(+) A-I      intronic
chr1:246827833(+) A-I      intronic
chr1:246739981(+) A-I      intronic
chr1:246779769(+) A-I      intronic
chr1:246756829(+) A-I      intronic
chr1:246779960(+) A-I      intronic
chr1:246777948(+) A-I      intronic
chr1:246757169(+) A-I      intronic
chr1:246826948(+) A-I      intronic
chr1:246807544(+) A-I      intronic
chr1:246826498(+) A-I      intronic
chr1:246806317(+) A-I      intronic
chr1:246796866(+) A-I      intronic
chr1:246827809(+) A-I      intronic
chr1:246747311(+) A-I      intronic
chr1:246731403(+) A-I      intronic
chr1:246739951(+) A-I      intronic
chr1:246824375(+) A-I      intronic
chr1:246824389(+) A-I      intronic
chr1:246827028(+) A-I      intronic
chr1:246745751(+) A-I      intronic
chr1:246825816(+) A-I      intronic
chr1:246823850(+) A-I      intronic
chr1:246809570(+) A-I      intronic
chr1:246788136(+) A-I      intronic
chr1:246826889(+) A-I      intronic
chr1:246809887(+) A-I      intronic
chr1:246747388(+) A-I      intronic
chr1:246824700(+) A-I      intronic
chr1:246767445(+) A-I      intronic
chr1:246761555(+) A-I      intronic
chr1:246787244(+) A-I      intronic
chr1:246809431(+) A-I      intronic
chr1:246788190(+) A-I      intronic
chr1:246826510(+) A-I      intronic
chr1:246823906(+) A-I      intronic
chr1:246828687(+) A-I      intronic
chr1:246761515(+) A-I      intronic
chr1:246825771(+) A-I      intronic
chr1:246825856(+) A-I      intronic
chr1:246741773(+) A-I      intronic
chr1:246826892(+) A-I      intronic
chr1:246765125(+) A-I      intronic
chr1:246779016(+) A-I      intronic
chr1:246806320(+) A-I      intronic
chr1:246826499(+) A-I      intronic
chr1:246768620(+) A-I      intronic
chr1:246824365(+) A-I      intronic
chr1:246757165(+) A-I      intronic
chr1:246796867(+) A-I      intronic
chr1:246748828(+) A-I      intronic
chr1:246828568(+) A-I      intronic
chr1:246789513(+) A-I      intronic
chr1:246825955(+) A-I      intronic
chr1:246796934(+) A-I      intronic
chr1:246757811(+) A-I      intronic
chr1:246824026(+) A-I      intronic
chr1:246749316(+) A-I      intronic
chr1:246778876(+) A-I      intronic
chr1:246828447(+) A-I      intronic
chr1:246826383(+) A-I      intronic
chr1:246757950(+) A-I      intronic
chr1:246824514(+) A-I      intronic
chr1:246786792(+) A-I      intronic
chr1:246768071(+) A-I      intronic
chr1:246786807(+) A-I      intronic
chr1:246779641(+) A-I      intronic
chr1:246775621(+) A-I      intronic
chr1:246825820(+) A-I      intronic
chr1:246823869(+) A-I      intronic
chr1:246778994(+) A-I      intronic
chr1:246739996(+) A-I      intronic
chr1:246828624(+) A-I      intronic
chr1:246809003(+) A-I      intronic
chr1:246773508(+) A-I      intronic
chr1:246826884(+) A-I      intronic
chr1:246734551(+) A-I      intronic
chr1:246809571(+) A-I      intronic
chr1:246734474(+) A-I      intronic
chr1:246806255(+) A-I      intronic
chr1:246764975(+) A-I      intronic
chr1:246749284(+) A-I      intronic
chr1:246756689(+) A-I      intronic
chr1:246787110(+) A-I      intronic
chr1:246775990(+) A-I      intronic
chr1:246826880(+) A-I      intronic
chr1:246779889(+) A-I      intronic
chr1:246823881(+) A-I      intronic
chr1:246824372(+) A-I      intronic
chr1:246786308(+) A-I      intronic
chr1:246824634(+) A-I      intronic
chr1:246806325(+) A-I      intronic
chr1:246764486(+) A-I      intronic
chr1:246788230(+) A-I      intronic
chr1:246823964(+) A-I      intronic
chr1:246771500(+) A-I      intronic
chr1:246779665(+) A-I      intronic
chr1:246823808(+) A-I      intronic
chr1:246826922(+) A-I      intronic
chr1:246761410(+) A-I      intronic
chr1:246809435(+) A-I      intronic
chr1:246739977(+) A-I      intronic
chr1:246731334(+) A-I      intronic
chr1:246823827(+) A-I      intronic
chr1:246775552(+) A-I      intronic
chr1:246787005(+) A-I      intronic
chr1:246761409(+) A-I      intronic
chr1:246775583(+) A-I      intronic
chr1:246788218(+) A-I      intronic
chr1:246786243(+) A-I      intronic
chr1:246793270(+) A-I      intronic
chr1:246747268(+) A-I      intronic
chr1:246731908(+) A-I      intronic
chr1:246825755(+) A-I      intronic
chr1:246826381(+) A-I      intronic
chr1:246824694(+) A-I      intronic
chr1:246826568(+) A-I      intronic
chr1:246824600(+) A-I      intronic
chr1:246828431(+) A-I      intronic
chr1:246745731(+) A-I      intronic
chr1:246823868(+) A-I      intronic
chr1:246826992(+) A-I      intronic
chr1:246824025(+) A-I      intronic
chr1:246824538(+) A-I      intronic
chr1:246789469(+) A-I      intronic
chr1:246826478(+) A-I      intronic
chr1:246823939(+) A-I      intronic
chr1:246776045(+) A-I      intronic
chr1:246823872(+) A-I      intronic
chr1:246823916(+) A-I      intronic
chr1:246736112(+) A-I      intronic
chr1:246749261(+) A-I      intronic
chr1:246824401(+) A-I      intronic
chr1:246775656(+) A-I      intronic
chr1:246749365(+) A-I      intronic
chr1:246825785(+) A-I      intronic
chr1:246828490(+) A-I      intronic
chr1:246828554(+) A-I      intronic
chr1:246824539(+) A-I      intronic
chr1:246823852(+) A-I      intronic
chr1:246735453(+) A-I      intronic
chr1:246806468(+) A-I      intronic
chr1:246757531(+) A-I      intronic
chr1:246823849(+) A-I      intronic
chr1:246785132(+) A-I      intronic
chr1:246825791(+) A-I      intronic
chr1:246735454(+) A-I      intronic
chr1:246824437(+) A-I      intronic
chr1:246779801(+) A-I      intronic
chr1:246823866(+) A-I      intronic
chr1:246828657(+) A-I      intronic
chr1:246761401(+) A-I      intronic
chr1:246779762(+) A-I      intronic
chr1:246806336(+) A-I      intronic
chr1:246734550(+) A-I      intronic
chr1:246757847(+) A-I      intronic
chr1:246793256(+) A-I      intronic
chr1:246827793(+) A-I      intronic
chr1:246776102(+) A-I      intronic
chr1:246827031(+) A-I      intronic
chr1:246828410(+) A-I      intronic
chr1:246779937(+) A-I      intronic
chr1:246777935(+) A-I      intronic
chr1:246824540(+) A-I      intronic
chr1:246778995(+) A-I      intronic
chr1:246827868(+) A-I      intronic
chr1:246775993(+) A-I      intronic
chr1:246828470(+) A-I      intronic
chr1:246825927(+) A-I      intronic
chr1:246757991(+) A-I      intronic
chr1:246828623(+) A-I      intronic
chr1:246823778(+) A-I      intronic
chr1:246828600(+) A-I      intronic
chr1:246786976(+) A-I      intronic
chr1:246809258(+) A-I      intronic
chr1:246741762(+) A-I      intronic
chr1:246768027(+) A-I      intronic
chr1:246826788(+) A-I      intronic
chr1:246761413(+) A-I      intronic
chr1:246735523(+) A-I      intronic
chr1:246775665(+) A-I      intronic
chr1:246768021(+) A-I      intronic
chr1:246768650(+) A-I      intronic
chr1:246776013(+) A-I      intronic
chr1:246814084(+) A-I      intronic
chr1:246785096(+) A-I      intronic
chr1:246828520(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CNST
chr1:246786872(+) A-I intron -    22327324
chr1:246823786(+) A-I intron -    22327324
chr1:246823803(+) A-I intron -    22327324
chr1:246823930(+) A-I intron -    22327324
chr1:246735453(+) A-I intron -    21960545
chr1:246747268(+) A-I intron -    21960545
chr1:246807411(+) A-I intron -    21960545
chr1:246826383(+) A-I intron -    21960545
chr1:246731334(+) A-G intron -    22484847
chr1:246734550(+) A-G intron -    22484847
chr1:246734551(+) A-G intron -    22484847
chr1:246736112(+) A-G intron -    22484847
chr1:246739927(+) A-G intron -    22484847
chr1:246739951(+) A-G intron -    22484847
chr1:246739977(+) A-G intron -    22484847
chr1:246739981(+) A-G intron -    22484847
chr1:246739996(+) A-G intron -    22484847
chr1:246742892(+) A-G intron -    22484847
chr1:246744112(+) A-G intron -    22484847
chr1:246747268(+) A-G intron -    22484847
chr1:246749251(+) A-G intron -    22484847
chr1:246749261(+) A-G intron -    22484847
chr1:246749283(+) A-G intron -    22484847
chr1:246749284(+) A-G intron -    22484847
chr1:246749316(+) A-G intron -    22484847
chr1:246756829(+) A-G intron -    22484847
chr1:246757811(+) A-G intron -    22484847
chr1:246757847(+) A-G intron -    22484847
chr1:246757852(+) A-G intron -    22484847
chr1:246757950(+) A-G intron -    22484847
chr1:246761401(+) A-G intron -    22484847
chr1:246768071(+) A-G intron -    22484847
chr1:246773508(+) A-G intron -    22484847
chr1:246775583(+) A-G intron -    22484847
chr1:246775993(+) A-G intron -    22484847
chr1:246776013(+) A-G intron -    22484847
chr1:246776102(+) A-G intron -    22484847
chr1:246776144(+) A-G intron -    22484847
chr1:246778994(+) A-G intron -    22484847
chr1:246778995(+) A-G intron -    22484847
chr1:246779016(+) A-G intron -    22484847
chr1:246779889(+) A-G intron -    22484847
chr1:246779960(+) A-G intron -    22484847
chr1:246785132(+) A-G intron -    22484847
chr1:246786151(+) A-G intron -    22484847
chr1:246786265(+) A-G intron -    22484847
chr1:246786271(+) A-G intron -    22484847
chr1:246786308(+) A-G intron -    22484847
chr1:246786796(+) A-G intron -    22484847
chr1:246786807(+) A-G intron -    22484847
chr1:246786844(+) A-G intron -    22484847
chr1:246786852(+) A-G intron -    22484847
chr1:246786872(+) A-G intron -    22484847
chr1:246786917(+) A-G intron -    22484847
chr1:246786925(+) A-G intron -    22484847
chr1:246788136(+) A-G intron -    22484847
chr1:246788156(+) A-G intron -    22484847
chr1:246788190(+) A-G intron -    22484847
chr1:246788217(+) A-G intron -    22484847
chr1:246788218(+) A-G intron -    22484847
chr1:246788230(+) A-G intron -    22484847
chr1:246793251(+) G-C intron -    22484847
chr1:246806255(+) A-G intron -    22484847
chr1:246806291(+) A-G intron -    22484847
chr1:246806325(+) A-G intron -    22484847
chr1:246807544(+) A-G intron -    22484847
chr1:246809003(+) A-G intron -    22484847
chr1:246809887(+) A-G intron -    22484847
chr1:246823754(+) A-G intron -    22484847
chr1:246823778(+) A-G intron -    22484847
chr1:246823786(+) A-G intron -    22484847
chr1:246823803(+) A-G intron -    22484847
chr1:246823881(+) A-G intron -    22484847
chr1:246823925(+) A-G intron -    22484847
chr1:246824292(+) A-G intron -    22484847
chr1:246824365(+) A-G intron -    22484847
chr1:246824389(+) A-G intron -    22484847
chr1:246824546(+) A-G intron -    22484847
chr1:246824603(+) A-G intron -    22484847
chr1:246824663(+) A-G intron -    22484847
chr1:246825856(+) A-G intron -    22484847
chr1:246825927(+) A-G intron -    22484847
chr1:246825953(+) A-G intron -    22484847
chr1:246825967(+) A-G intron -    22484847
chr1:246826997(+) A-G intron -    22484847
chr1:246827809(+) A-G intron -    22484847
chr1:246827833(+) A-G intron -    22484847
chr1:246828410(+) A-G intron -    22484847
chr1:246828424(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CNST
chr1:246729860-246729861(+) m6A 5'UTR//exon       25456834//24981863
chr1:246729917-246729918(+) m6A 5'UTR//exon       25456834//24981863
chr1:246755063-246755064(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr1:246755120-246755121(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246755129-246755130(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246755157-246755158(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr1:246755177-246755178(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr1:246755221-246755222(+) m6A CDS//exon       25456834//24981863//22608085
chr1:246810448-246810449(+) m6A CDS//exon       24284625//24981863//22608085
chr1:246810538-246810539(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr1:246810575-246810576(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246810640-246810641(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246810665-246810666(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246810715-246810716(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810761-246810762(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810793-246810794(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810879-246810880(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810923-246810924(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810935-246810936(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246810974-246810975(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246811132-246811133(+) m6A CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085
chr1:246811139-246811140(+) m6A CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085
chr1:246811148-246811149(+) m6A CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085
chr1:246823583-246823584(+) m6A CDS       24981863//22608085
chr1:246829075-246829076(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr1:246829133-246829134(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829142-246829143(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829179-246829180(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829218-246829219(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829224-246829225(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829255-246829256(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829264-246829265(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:246829315-246829316(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr1:246829322-246829323(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr1:246829360-246829361(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr1:246830050-246830051(+) m6A 3'UTR       24284625
chr1:246831316-246831317(+) m6A 3'UTR       24981863
chr1:246831365-246831366(+) m6A 3'UTR       24981863
chr1:246831457-246831458(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-199b-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome B cell lymphoma cell lines|EBV-transformed lymphoblastoid B cells     25242326
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Cerebrospinal fluid     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
CNST
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-199b-5p
[[4-(3-Aminophenyl)-2-pyridyl]methyleneamino]thiourea 9556427 Drug sensitive
Acid Green 27 80837 Drug sensitive
Jacaranone 73307 Drug sensitive
Redoxal 72571 Drug sensitive
Piperidinium pentamethylenedithiocarbamate 72508 Drug sensitive
4H-Furo(3,2-g)(1)benzopyran-4,7,9-trione 68083 Drug sensitive
Melicopidine 68060 Drug sensitive
3-Hydroxy-3'-nitro-2-naphthanilide 67277 Drug sensitive
Baccharinoid B4 6711263 Drug sensitive
Ixabepilone 6445540 Drug sensitive
Tributyrin 6050 Drug sensitive
Verrucarin A, 3'-(acetyloxy)-7'-deoxo-2'-deoxy-4'-hydroxy-7'-(1-hydroxyethyl)- 5933240 Drug sensitive
Methyl N-[6-[4-(phenylcarbamoylamino)phenoxy]-1H-benzimidazol-2-yl]carbamate;hydrochloride 57396352 Drug sensitive
Cisplatin 5702198 Drug sensitive
8B-Hydroxy-9B,10B-epoxyverrucarin A 5477536 Drug sensitive
Tetrocarcin A, sodium salt 54724658 Drug sensitive
(8R,9S,13S,14S,17S)-13-Methyl-2-[(E)-prop-1-enyl]-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthrene-3,17-diol 5468270 Drug sensitive
Herveline O 5459269 Drug sensitive
Dihydro-5-azacytidine 5351280 Drug sensitive
1-Piperidineethanol, alpha-[p-(p-chlorostyryl)phenyl]- 5351150 Drug sensitive
5-Methyl-2-{[(2)-3-phenylprop-2-enoyl]amino}benzamide 53329052 Drug sensitive
Centaureidin 5315773 Drug sensitive
Herbimycin 5311102 Drug sensitive
Erioflorin acetate 5281443 Drug sensitive
Spiperone 5265 Drug resistant
Dichloroplatinum; 2-(4-methoxyphenyl)ethanamine 498558 Drug sensitive
1-(4-(Benzyloxy)phenyl)-3-(3-(1-ethyl-4-(1H-pyrrolo[2,3-b]pyridin-4-yl)-1H-pyrazol-3-yl)phenyl)urea 44587530 Drug sensitive
Oxyacanthine 442333 Drug sensitive
Isobrucein A 441802 Drug sensitive
Glaucarubinone 441796 Drug sensitive
Di-n-octyl-secalonsaure A 430141 Drug sensitive
Carboplatin 426756 Drug sensitive
Cyano pyridine-P-CH3 406496 Drug sensitive
S-(Dimethylarsino)-3-mercapto-1,2-propyl dibenzoate 406481 Drug sensitive
S-(Diisopropylarsino)-3-mercapto-1,2-propanediol 406478 Drug sensitive
Aminopyrimidine-CH3 406278 Drug sensitive
3-(3-Hydroxy-4-methoxybenzyl)-5,7-dihydroxychroman-4-one 404571 Drug sensitive
1,2 Benzo-8-(1-hydroxy-2-methylamino propane)-3-phenoxazone 400530 Drug sensitive
Asimicinone 393461 Drug sensitive
beta-Lapachone 3885 Drug sensitive
Lapachol 3884 Drug sensitive
2-(1-Propynyl)estradiol 388008 Drug sensitive
Acetic acid,4,7,10-tetraazacyclododecane-1,7-diyl]bis 387352 Drug sensitive
N-(2-Bromo-5-methoxybenzylidene)-6,7-dimethoxy-1-naphthalenamine 387181 Drug sensitive
2-Ethenyl estradiol 381026 Drug sensitive
5,8-Dihydroxy-2-(4-(2-pyridinyl)-1-piperazinyl)naphthoquinone 376947 Drug sensitive
2-Acetyl-1,2-dihydroellipticine 376328 Drug resistant
Antineoplastic-656904 376224 Drug sensitive
3,8-Dimethyl-1,2-naphthoquinone 373912 Drug sensitive
Antineoplastic-645807 371508 Drug resistant
Diethyl p-phenoxybenzalmalonate 370253 Drug sensitive
3,8,13,18,23-Pentaazapentacosane 368998 Drug sensitive
2,7-Dicyanoxanthone 363841 Drug sensitive
3-Nitro-5-formylisoxazole 362479 Drug sensitive
1-Chloro-3-(3-chloropropylsulfonylsulfanyl)propane 355643 Drug sensitive
Maxima isoflavone D 343081 Drug sensitive
1-Piperidinesulfonamide, N-(7-amino-2-naphthalenyl)- 333624 Drug sensitive
Mercury, (p-carboxyphenyl)(purin-6-ylthio)- 3246339 Drug sensitive
2,3-Bis(iodomethyl)-6-methoxyquinoxaline 286257 Drug sensitive
1-(2-Chloroethyl)-3-(2,6-dioxo-3-piperidyl)-1-nitrosourea 26328 Drug sensitive
Hookerianamide K 25016412 Drug sensitive
(2-Methoxy-9,10-dihydrophenanthren-3-yl)methyl-dimethyl-(phenylsulfanylmethyl)azanium;bromide 24200489 Drug sensitive
Diethylcarbamodithioic acid, sodium salt 21192315 Drug sensitive
Methyl 1,6,8,14a-tetrahydroxy-11-[(4-hydroxy-3,5-dimethoxy-6-methyloxan-2-yl)amino]-6a-methoxy-3-methyl-7,9,12,14-tetraoxo-5,6-dihydrobenzo[a]tetracene-2-carboxylate 197261 Drug sensitive
5-Nitroso-8-hydroxyquinoline 19103 Drug sensitive
Trihexyltetradecylphosphonium hexafluorophosphate 16212610 Drug sensitive
N-(4-(1-Aziridinyl)butyl)-1,3-propanediamine 160395 Drug sensitive
Arsenic trioxide 14888 Drug sensitive
1H-2,10a-Ethanophenanthrene, kaur-16-en-15-one deriv. 146156727 Drug sensitive
Gold;(2S,3R,4S,5R,6R)-3,4,5-triacetyloxy-6-(acetyloxymethyl)oxane-2-thiolate;triethylphosphanium 138402869 Drug sensitive
8-Azaguanine 135403646 Drug sensitive
(2S,4S,5R)-20-De(1-hydroxypropyl)-6-demethyl-2,6-diethyl-5-hydroxy-20-(1-hydroxybutyl)lysocellin 124081057 Drug sensitive
Astraphloxin 12299852 Drug sensitive
Unii-C616DV5Y11 117587576 Drug sensitive
2,2'-Bioxirane 11254 Drug sensitive
(5S,7S)-5,7,9,10-Tetrahydroxy-2-methoxy-7-methyl-6,8-dihydro-5H-anthracene-1,4-dione 11209399 Drug sensitive
Acetylenedicarboxamide 10971 Drug sensitive
Fusariotoxin T-2 102515111 Drug sensitive
(1S,3R,6R,12S,14R,15S,18R,19E,21Z,25R,26S,27R)-6,15-Dihydroxy-18-[(1R)-1-hydroxyethyl]-5,14,26-trimethylspiro[2,10,13,17,24-pentaoxapentacyclo[23.2.1.03,8.08,26.012,14]octacosa-4,19,21-triene-27,2'-oxirane]-11,23-dione 101307863 Drug sensitive
tgf.alpha.-pe40 - Drug resistant
toxin .delta.53l - Drug resistant
tp4ek - Drug resistant
1h-1,2,4-triazole, 3-(4-diazo-4h-imidazol-5-yl)- - Drug sensitive
1-piperidinecarbodithioic acid, antimony complex - Drug sensitive
2,3-dihydro-2,3-dihydroxy-brefeldin a - Drug sensitive
3,4-diphenylisoxazolo[3,4-d]pyridazin-7(6h)-one - Drug sensitive
4'-deoxy-13',17-dinitro-3',4'-epoxy-vincaleukoblastine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
4-thiomorpholinecarbodithioic acid, antimony complex - Drug sensitive
5,8-quinolinedione, 6-amino-7-bromo- - Drug sensitive
5.alpha.,25d-spirostan-3.beta.-ol glycoside - Drug sensitive
benzene, 1,1'-[(1,3-butadiene-1,4-diyl)sulfonyl]bis - Drug sensitive
benzo[1,2-b:4,5-b']dithiophene-4,8-diol, dipropionate - Drug sensitive
benzo[1,2-c:4,5-c']dipyrrole-1,3,5,7(2h,6h)-tetraimine - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
nsc 708783 incorporated in micelles, 0.20% (w/w) of drug - Drug sensitive
phosphonium, (3-bromopropyl)triphenyl- bromide - Drug sensitive
piceatannol, 4,3',5'-trimethyl,1s0 - Drug sensitive
roridin a, 8-hydroxy-9b,10b-epoxy- - Drug sensitive
(Z)-6-chloro-3-((2-(4-methoxyphenyl)-3H-benzo[d]imidazol-5-yl)methylene)indolin-2-one - Drug sensitive
1-[(2-phenylethoxy)methyl]-5-ethyl-6-(phenylseleno)uracil - Drug sensitive
2'-deoxy-2'-difluoromethylene-adenosine - Drug sensitive
4-carbo-1-thiazolidine-3-o-gluconyl-.gamma.-lactone - Drug sensitive
active compound from cephalodiscus gilchristi - Drug sensitive
antineoplastic-615538 - Drug sensitive
his 47-methyl ct - Drug sensitive
insulin-methotrexate conjugate - Drug sensitive
potassium arsenite - Drug sensitive
tyrosine kinase inhibitor bte-16 (mw=221.24) - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-199b-5p
Hyaluronidase 91820602 Drug interaction    RC00001945
Alocrest 60780 Drug interaction    RC00001941
Vincristine 5978 Drug interaction    RC00001938
D-Glucose 5793 Drug interaction    RC00001937
Prednisolone 5755 Drug interaction    RC00001936
Eloxatine 5310940 Drug interaction    RC00001944
Imatinib 5291 Drug interaction    RC00001935
4-Hydroxynonenal 5283344 Drug interaction    RC00001943
Enoxacin 3229 Drug interaction    RC00001934
Doxorubicin 31703 Drug interaction    RC00001940
Daunorubicin 30323 Drug interaction    RC00001939
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00001933
Verapamil 2520 Drug interaction    RC00001932
Imatinib mesylate 123596 Drug interaction    RC00001942
Asparaginase Escherichia coli - Drug interaction    RC00001946
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-199b-5p
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-199b-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-199b-5p
Interactor2: CNST

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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