Detail Information

Basic Information:


  VIRBase ID:  

HHID00020784

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol mmu-miR-27a-3p ENSMUST00000235647
miRBase
Accession/Entrez ID		 MIMAT0000537 ENSMUST00000235647
Organism Mus musculus Mus musculus
Category miRNA mRNA
Alias - 3010001M15Rik//AA960128//ASNRS//C78150//NARS1

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate mmu-miR-27a-3p
Exosome Mouse metastatic mammary carcinoma cells (4T1)|Non-tumorigenic mouse mammary epithelial cells (NMuMG)     25446899
Exosome Serum     28160157
Exosome B6 BMDCs     22031862
Exosome Mouse hypothalamic neuronal cell line (GT1-7)     22965126
Exosome Bone marrow-derived macrophages     25159140
Mitochondrion Heart tissue (subsarcolemmal and interfibrillar)     26377859
Nucleus Liver cells     21862971

Interaction Network (The top 100 interactions):


Interactor1: mmu-miR-27a-3p
Interactor2: ENSMUST00000235647

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRanda
Support Database ViRBase

References:


PMID 32552669 Target region None
Source ViRBase Interactor1 expression Downregulation
Tissue or cell line Mice brain tissues Interactor2 expression None
Description The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).

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