Basic Information:

  VIRBase ID:  

HHID00020665

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-27a-3p:  MIMAT0000537          Il2ra:  NM_008367     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-27a-3p	Il2ra
miRBase Accession/Entrez ID	MIMAT0000537	16184
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	CD25//I//Il2r//Ly-4//Ly-43

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Il2ra	chr2:11642830-11642831(+) m6A 5'UTR       24981863 chr2:11676931-11676932(+) m6A CDS       24981863 chr2:11689773-11689774(+) m6A CDS       24981863 chr2:11689898-11689899(+) m6A 3'UTR       24981863 chr2:11689916-11689917(+) m6A 3'UTR       24981863 chr2:11689940-11689941(+) m6A 3'UTR       24981863 chr2:11689945-11689946(+) m6A 3'UTR       24981863 chr2:11690164-11690165(+) m6A 3'UTR       24981863 chr2:11690411-11690412(+) m6A 3'UTR       24981863 chr2:11690467-11690468(+) m6A 3'UTR       24981863 chr2:11690507-11690508(+) m6A 3'UTR       24981863 chr2:11690513-11690514(+) m6A 3'UTR       24981863 chr2:11690524-11690525(+) m6A 3'UTR       24981863 chr2:11690546-11690547(+) m6A 3'UTR       24981863 chr2:11690568-11690569(+) m6A 3'UTR       24981863 chr2:11690649-11690650(+) m6A 3'UTR       24981863 chr2:11690697-11690698(+) m6A 3'UTR       24981863 chr2:11690753-11690754(+) m6A 3'UTR       24981863 chr2:11690774-11690775(+) m6A 3'UTR       24981863 chr2:11690794-11690795(+) m6A 3'UTR       24981863 chr2:11690885-11690886(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	mmu-miR-27a-3p	Exosome Mouse metastatic mammary carcinoma cells (4T1)|Non-tumorigenic mouse mammary epithelial cells (NMuMG)     25446899 Exosome Serum     28160157 Exosome B6 BMDCs     22031862 Exosome Mouse hypothalamic neuronal cell line (GT1-7)     22965126 Exosome Bone marrow-derived macrophages     25159140 Mitochondrion Heart tissue (subsarcolemmal and interfibrillar)     26377859 Nucleus Liver cells     21862971

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-27a-3p
Interactor2: Il2ra

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32552669	Target region	None
Source	ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	Mice brain tissues	Interactor2 expression	None
Description	The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).