Detail-Interactions: | |
RAID ID: | RRI00003946 |
---|---|
RNA/Protein Symbol 1: | SNORA19(ACA19) |
RNA/Protein Category 1: | snoRNA |
RNA/Protein Symbol 2: | RNA28S2 |
RNA/Protein Category 2: | rRNA |
Validated Method: | Mapping of pseudouridines, Fluorescence in situ hybridization |
Tissue: | Hela cells |
PMID: | 15199136 |
Detail description: | At the outset of this study, six human box H/ACA guide snoRNAs (U19, U64, U65 U68, E2, and E3) had been implicated in the synthesis of nine pseudouridines in 28S rRNA (The following popper user interface control may not be accessible. Tab to the next button to revert the control to an accessible version.Destroy user interface control19) (see Table S2 in the supplemental material). |
The Predicated Binding Sites between and | |||||
By miRanda | Structure | Match Score | Energy Score | Location | Location |
The Predicated Binding Sites between and | ||||
By RIsearch | Structure | Location | Location | Score |
The Predicated Binding Sites of RNA28S2 | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.