Detail-Interactions: | |
RAID ID: | RPI00000641 |
---|---|
RNA/Protein Symbol 1: | beta-F1-ATPase mRNA |
RNA/Protein Category 1: | mRNA |
RNA/Protein Symbol 2: | 3`betaFBP |
RNA/Protein Category 2: | Protein |
Validated Method: | RNase H protection assay, RNA Electrophoretic Mobility Shift Assay (RNA-EMSA), UV Cross-linking Assay, RNase T1 mapping |
Tissue: | liver |
PMID: | 9271403 |
Detail description: | Electrophoretic Mobility Shift Assay (EMSA)s and UV cross-linking experiments allowed the identification of an acutely regulated protein (3`betaFBP) of the liver that binds at the 3` UTR of beta-F1-ATPase mRNA. |
The Predicated Binding Sites between and | |||||
By miRanda | Structure | Match Score | Energy Score | Location | Location |
The Predicated Binding Sites between and | ||||
By RIsearch | Structure | Location | Location | Score |
The Predicated Binding Sites of 3`betaFBP | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.