Basic Information
| RNALocate ID: | RLID:00019391 |
| RNA Symbol: | CAPN1 |
| Localization: | Cytosol |
RNA Information
| RNA Name: | CAPN1 |
| RNA ID: | NCBI:823|Ensembl:ENSG00000014216 |
| RNA Category: | mRNA |
| Species: | Homo sapiens |
| Alias: | CANP|CANP1|CANPL1|SPG76|muCANP|muCL |
Localization Information
| PubMed ID: | 21613539 |
| Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
| Method: | qRT-PCR |
| Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Other Subcellular Localization
| RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
| RLID:00019392 | Ribosome | Colon cancer cells | 24393600 |
| RLID-D:00006321 | Chromatin | K562 cells | |
| RLID-D:00012872 | Cytosol | K562 cells | |
| RLID-D:00023392 | Nucleolus | K562 cells | |
| RLID-D:00030646 | Nucleoplasm | K562 cells | |
| RLID-D:00039353 | Nucleus | HeLa-S3 cells | |
| RLID-D:10015303 | Exosome | Blood |
RNA Interaction Information
| Resource | RNA Symbol | Species | Link | RNALocate ID |
| RNAInter | SNHG16 | Homo sapiens | RR00274741 |
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