Basic Information
| RNALocate ID: | RLID:00016877 |
| RNA Symbol: | SH3GL1 |
| Localization: | Cytosol |
RNA Information
| RNA Name: | SH3GL1 |
| RNA ID: | NCBI:6455|Ensembl:ENSG00000141985 |
| RNA Category: | mRNA |
| Species: | Homo sapiens |
| Alias: | CNSA1|EEN|SH3D2B|SH3P8 |
Localization Information
| PubMed ID: | 21613539 |
| Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
| Method: | qRT-PCR |
| Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Other Subcellular Localization
| RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
| RLID:00016878 | Ribosome | HEK-293 cells | 22199352 |
| RLID:00016879 | Ribosome | Colon cancer cells | 24393600 |
| RLID-D:00005235 | Chromatin | K562 cells | |
| RLID-D:00012017 | Cytosol | HCC cell line (HepG2)|K562 cells | |
| RLID-D:00022529 | Nucleolus | K562 cells | |
| RLID-D:00029591 | Nucleoplasm | K562 cells | |
| RLID-D:00038095 | Nucleus | HeLa-S3 cells | |
| RLID-D:10012924 | Exosome | Blood |
RNA Interaction Information
| Resource | RNA Symbol | Species | Link | RNALocate ID |
| RNAInter | SNHG16 | Homo sapiens | RR01295783 |
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