Basic Information
| RNALocate ID: | RLID:00015860 |
| RNA Symbol: | PTPN11 |
| Localization: | Cytosol |
RNA Information
| RNA Name: | PTPN11 |
| RNA ID: | NCBI:5781|Ensembl:ENSG00000179295 |
| RNA Category: | mRNA |
| Species: | Homo sapiens |
| Alias: | BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 |
Localization Information
| PubMed ID: | 21613539 |
| Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
| Method: | qRT-PCR |
| Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Homology Information
| RNA Symbol | Gene ID | Species | Detail |
| PTPN11 | NCBI:477488 | Canis lupus familiaris | Go to |
Other Subcellular Localization
| RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
| RLID:00012448 | Pseudopodium | MSV-MDCK-INV cells | 18845542 |
| RLID:00015861 | Ribosome | HEK-293 cells | 22199352 |
| RLID:00015862 | Ribosome | Colon cancer cells | 24393600 |
| RLID-D:00004831 | Chromatin | K562 cells | |
| RLID-D:00011702 | Cytosol | HCC cell line (HepG2) | |
| RLID-D:00017360 | Membrane | HCC cell line (HepG2) | |
| RLID-D:00022213 | Nucleolus | K562 cells | |
| RLID-D:00029189 | Nucleoplasm | K562 cells | |
| RLID-D:00037600 | Nucleus | HCC cell line (HepG2)|K562 cells | |
| RLID-D:10012004 | Exosome | Blood |
RNA Interaction Information
| Resource | RNA Symbol | Species | Link | RNALocate ID |
| RNAInter | hsa-miR-124-3p | Homo sapiens | RR01154564 |
TOP