Basic Information
RNALocate ID: | RLID:00010092 |
RNA Symbol: | TRIM59 |
Localization: | Endoplasmic reticulum |
RNA Information
RNA Name: | TRIM59 |
RNA ID: | NCBI:286827|Ensembl:ENSG00000213186 |
RNA Category: | mRNA |
Species: | Homo sapiens |
Alias: | IFT80L|MRF1|RNF104|TRIM57|TSBF1 |
Localization Information
PubMed ID: | 21613539 |
Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
Method: | qRT-PCR |
Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Homology Information
RNA Symbol | Gene ID | Species | Detail |
Trim59 | NCBI:66949 | Mus musculus | Go to |
Other Subcellular Localization
RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
RLID:00010091 | Cytoplasm | Nasopharyngeal carcinoma cells | 20498841 |
RLID:00010093 | Nucleus | Nasopharyngeal carcinoma cells | 20498841 |
RLID:00010094 | Ribosome-free cytosol | Colon cancer cells | 24393600 |
RLID-D:00002533 | Chromatin | K562 cells | |
RLID-D:00026905 | Nucleoplasm | K562 cells | |
RLID-D:00034898 | Nucleus | HeLa-S3 cells | |
RLID-D:10006458 | Exosome | Blood |
RNA Interaction Information
Resource | RNA Symbol | Species | Link | RNALocate ID |
RNAInter | SNHG16 | Homo sapiens | RR01337763 |
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