Basic Information
RNALocate ID: RLID:00017480
RNA Symbol: SS18
Localization: Nucleus
Localization from RNA-seq Dataset:  
RNA Information
RNA Name: NM_005637.2
RNA ID: NCBI:6760|Ensembl:ENSG00000141380
RNA Category: mRNA
Species: Homo sapiens
Alias: SSXT|SYT
Sequence:
Localization Information
PubMed ID: 20498841
Tissue/Cell Line: Nasopharyngeal carcinoma cells
Method: Next-generation RNA sequencing
Description: The N/C values of diverse sRNAs. sRNAs with raw read counts (non-normalized) more than 10 in at least one library were listed. N/C indicates the ratio of nuclear sRNA library count to cytoplasmic sRNA library count of each unique sequence. Nuclear and cytoplasmic indicate the read counts in the nuclear and cytoplasmic sRNA libraries, respectively. Read count of each sRNA were normalized to reads per million (RPM). Data are collected from Table S1.
Homology Information
RNA Symbol Gene ID Species Detail
Ss18 NCBI:268996 Mus musculus Go to
Other Subcellular Localization
RNALocate ID Localization Tissue/Cell line PubMed ID
RLID:00017476 Cytoplasm Nasopharyngeal carcinoma cells 20498841
RLID:00017477 Cytoplasm Nasopharyngeal carcinoma cells 20498841
RLID:00017478 Cytosol Human myelogenous leukemia cell line (K-562) 21613539
RLID:00017479 Nucleus Nasopharyngeal carcinoma cells 20498841
RLID:00017481 Ribosome Colon cancer cells 24393600
RLID-D:00005483 Chromatin K562 cells
RLID-D:00012214 Cytosol HCC cell line (HepG2)|K562 cells
RLID-D:00014896 Insoluble cytoplasm HCC cell line (HepG2)
RLID-D:00017623 Membrane HCC cell line (HepG2)|K562 cells
RLID-D:00022724 Nucleolus K562 cells
RLID-D:00029838 Nucleoplasm K562 cells
RLID-D:00038378 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells
RLID-D:10013477 Exosome Blood
RNA Interaction Information
Resource RNA Symbol Species Link RNALocate ID
RNAInter SNHG16 Homo sapiens RR01337479
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