Basic Information
RNALocate ID: | RLID:00016604 |
RNA Symbol: | SDC1 |
Localization: | Endoplasmic reticulum |
RNA Information
RNA Name: | SDC1 |
RNA ID: | NCBI:6382|Ensembl:ENSG00000115884 |
RNA Category: | mRNA |
Species: | Homo sapiens |
Alias: | CD138|SDC|SYND1|syndecan |
Localization Information
PubMed ID: | 21613539 |
Tissue/Cell Line: | Human myelogenous leukemia cell line (K-562) |
Method: | qRT-PCR |
Description: | The mRNA transcriptome is currently thought to be partitioned between the cytosol and endoplasmic reticulum (ER) compartments by binary selection; mRNAs encoding cytosolic/nucleoplasmic proteins are translated on free ribosomes, and mRNAs encoding topogenic signal-bearing proteins are translated on ER-bound ribosomes, with ER localization being conferred by the signal-recognition particle pathway. Data are collected from Supplemental Data - The gene lists selected by the described GO categories are listed. Gene ID and subcellular distribution values, in log2 as well as fractional ER enrichment are listed. |
Other Subcellular Localization
RNALocate ID | Localization | Tissue/Cell line | PubMed ID |
RLID:00016605 | Ribosome | Colon cancer cells | 24393600 |
RLID-D:00037947 | Nucleus | HCC cell line (HepG2) | |
RLID-D:10012598 | Exosome | Blood |
RNA Interaction Information
Resource | RNA Symbol | Species | Link | RNALocate ID |
RNAInter | SNHG16 | Homo sapiens | RR01277238 |
TOP