Basic Information
RNALocate ID: RLID:00016212
RNA Symbol: ACTB
Localization: Endoplasmic reticulum
Localization from RNA-seq Dataset:  
RNA Information
RNA Name: β-actin
RNA ID: NCBI:60|Ensembl:ENSG00000075624
RNA Category: mRNA
Species: Homo sapiens
Alias: BRWS1|PS1TP5BP1
Sequence:
Localization Information
PubMed ID: 15081402
Tissue/Cell Line: HeLa cells
Method: RT-PCR

Originally published in Biochem Biophys Res Commun. Tsuchiya N, et al, 2004. Reproduced under the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/)

Description: Distribution of pre-mRNA and mature mRNA for the β-actin gene analyzed by RT-PCR revealed that NP and INM fractions contained both species, but the ONM/ER fraction had predominantly mature mRNA (Fig. 5B), indicating that subnuclear fractionation was correctly working.
Homology Information
RNA Symbol Gene ID Species Detail
ACTB NCBI:396526 Gallus gallus Go to
Actb NCBI:11461 Mus musculus Go to
Actb NCBI:81822 Rattus norvegicus Go to
Other Subcellular Localization
RNALocate ID Localization Tissue/Cell line PubMed ID
RLID:00016206 Cytoplasm HEK-293T cells 27471035
RLID:00016207 Cytoplasm Human umbilical vein endothelial cells 29408197
RLID:00016208 Cytoplasm Nasopharyngeal carcinoma cells 20498841
RLID:00016209 Cytoplasm Embryonic stem cells 22193719
RLID:00016210 Cytoplasm U2OS cells 22679391
RLID:00016211 Cytosol Multidrug resistant cell line (NCI/ADR-RES) 20453113
RLID:00016213 Inner nuclear membrane HeLa cells 15081402
RLID:00016214 Mitochondrion Human cervical cancer cell line (HeLa) 26195734
RLID:00016215 Nucleoplasm HeLa cells 15081402
RLID:00016216 Nucleus Nasopharyngeal carcinoma cells 20498841
RLID:00016217 Outer nuclear membrane HeLa cells 15081402
RLID:00016218 Perinuclear Human T lymphocytes (Jurkat E6-1) 12923260
RLID:00016219 Ribosome Human lung fibroblasts (MRC5) 23452202
RLID:00016220 Ribosome Colon cancer cells 24393600
RLID:00016221 Ribosome HEK-293 cells 26239904
RLID:10000672 Exosome Colorectal cancer cell lines (HCT-15|SW480|WiDr) 22895844
RLID:20000517 Cell leading edge Fibroblasts 15923655
RLID:20000518 Lamellipodium Fibroblasts 15377515
RLID:20000519 Lamellipodium Fibroblastic single cells 2095368
RLID:20000520 Protrusion Fibroblasts 15923655
RLID:20000739 Cell leading edge Human T lymphocytes (Jurkat E6-1) 12923260
RLID:20000740 Cell leading edge CRC cell line (SW480) 18535985
RLID:20000741 Lamellipodium Lung fibroblasts 23452202
RLID:20000742 RNA-rich region WI-38 cells 29133588
RLID-D:00004961 Chromatin K562 cells
RLID-D:00011811 Cytosol HeLa-S3 cells|K562 cells
RLID-D:00022315 Nucleolus K562 cells
RLID-D:00029334 Nucleoplasm K562 cells
RLID-D:00037757 Nucleus HeLa-S3 cells|K562 cells
RLID-D:10012281 Exosome Plasma|Serum
RNA Interaction Information
Resource RNA Symbol Species Link RNALocate ID
RNAInter SNHG16 Homo sapiens RR00036816
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