The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Binding page: representing the predicted binding sites.
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | HVID00012002 |
|---|---|
| Virus: | Human papillomavirus(HPV) |
| Host Species: | Homo sapiens |
| ncRNA Source: | Host |
| ncRNA Category: | LncRNA |
| ncRNA Symbol: | MALAT1 |
| Tissue: | CaSki cells |
| Expression Direction of ncRNA: | Upregulate |
| Interactor in Virus or Host: | Virus |
| Interactor Category: | Protein |
| Interactor Symbol: | E7 |
| Expression Direction of Interactor: | - |
| Validated Method: | RT-PCR, Cell proliferation assay, Cell cycle analysis, Wound healing assay |
| PMID: | 24932303 |
| Detailed Description: | Of note, it was revealed that the expression of MALAT1 was decreased with the knockdown of HPV16 E6/E7 in CaSki cells. |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.