The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Binding page: representing the predicted binding sites.
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | HVID00011990 |
|---|---|
| Virus: | White spot syndrome virus(WSSV) |
| Host Species: | Litopenaeus vannamei |
| ncRNA Source: | Host |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | lva-mir-7 |
| Tissue: | - |
| Expression Direction of ncRNA: | - |
| Interactor in Virus or Host: | Virus |
| Interactor Category: | Protein |
| Interactor Symbol: | Wsv477 |
| Expression Direction of Interactor: | - |
| Validated Method: | Shrimp culture and shrimp infection by WSSV, Cell culture, transfection, and fluorescence assays, Northern blotting, Western blotting, Statistical analysis, Quantitative real-time PCR. |
| PMID: | 23015693 |
| Detailed Description: | In this study, the results showed that shrimp miR-7 could target the 3'-untranslated region(3'UTR) of the WSSV early gene wsv477, implying that miR-7 was involved in viral DNA replication. In insect High Five cells, the synthesized miR-7 significantly decreased the expression level of the fluorescent construct bearing the 3=UTR of wsv477 compared with the expression of the control constructs. . |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.