The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Binding page: representing the predicted binding sites.
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | HHID00011092 |
|---|---|
| Virus: | Gallid herpesvirus 2(GaHV-2) |
| Host Species: | Gallus gallus |
| ncRNA Source: | Host |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | gga-mir-21 |
| Tissue: | Virulent strain(RB-1B),vaccine strain(CVI988). |
| Expression Direction of ncRNA: | Upregulation |
| Interactor in Virus or Host: | Host |
| Interactor Category: | Protein |
| Interactor Symbol: | PDCD4 |
| Expression Direction of Interactor: | - |
| Validated Method: | Luciferase assays. |
| PMID: | 23055556 |
| Detailed Description: | GaHV-2 encodes a basic leucine zipper (bZIP) protein of the AP-1 family, Meq. We show here that the viral oncoprotein Meq binds to this promoter, thereby transactivating gga-miR-21 expression. We confirmed that this miRNA targets chicken programmed death cell 4(PDCD4) and promotes tumor cell growth and apoptosis escape. |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.