The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | HHID00011058 |
|---|---|
| Virus: | Cytomegalovirus(CMV) |
| Host Species: | Solanum lycopersicum |
| ncRNA Source: | Host |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | sly-MIR164b |
| Tissue: | - |
| Expression Direction of ncRNA: | - |
| Interactor in Virus or Host: | Host |
| Interactor Category: | Protein |
| Interactor Symbol: | NAC1 |
| Expression Direction of Interactor: | Upregulation |
| Validated Method: | Microarray analysis, RT-PCR. |
| PMID: | 23277401 |
| Detailed Description: | In the closed flower bud, the expression levels of NAC1 were most significantly increased in CMV-Fny, CMV-Fny-satT1 and TAV-Bj infections (RQ >15).The transcript levels of SPL, MYB, ARF10, DCL1, NAC1, ARF8, AGO1, SCL and AP2, as targets of miR156, miR159, miR160, miR162, miR164, miR167, miR168, miR171 and miR172 were also quantified using the same RNA preparations. |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.