The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | HHID00011043 |
|---|---|
| Virus: | Cucumber mosaic virus(CMV) |
| Host Species: | Solanum lycopersicum |
| ncRNA Source: | Host |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | sly-MIR164a |
| Tissue: | - |
| Expression Direction of ncRNA: | - |
| Interactor in Virus or Host: | Host |
| Interactor Category: | Protein |
| Interactor Symbol: | NAC1 |
| Expression Direction of Interactor: | - |
| Validated Method: | RT-PCR. |
| PMID: | 21590278 |
| Detailed Description: | NAC1, HD-ZIP and TCP4, were up-regulated during the pathogenic processes after CMV-Fny, CMV-Fny-satT1 and TAV-Bj infections. NAC1 is regulated by miR164, it has been reported that NAC1 controls lamina outgrowth on a grander scale than that of serrations [24]. Reduction of NAC gene function in a wide range of compound leaved plants reduces the number of leaflet and results in leaflet fusions as well as suppressing serrations [25, 26]. MiR165/166-regulated HD-ZIP is important for establishing the adaxial cell fate during leaf dorso-ventral patterning. MiR319-regulated TCP4 is also indispensable for proper leaf morphogenesis and leaf senescence [24, 27]. |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.