The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Binding page: representing the predicted binding sites.
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | VVID00011015 |
|---|---|
| Virus: | Rhesus lymphocryptovirus(rLCV) |
| Host Species: | Macaca mulatta |
| ncRNA Source: | Virus |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | rlcv-mir-rL1-16 |
| Tissue: | rLCV-infected rhesus macaquerLCLs |
| Expression Direction of ncRNA: | - |
| Interactor in Virus or Host: | Virus |
| Interactor Category: | mRNA |
| Interactor Symbol: | LMP1 |
| Expression Direction of Interactor: | - |
| Validated Method: | PAR-CLIP. |
| PMID: | 24257599 |
| Detailed Description: | Intriguingly, seed matches for miR-rL1-8-5p, rL1-23, rL1-16, and rL1-28 were present in the herpesvirus papio LMP1 3'UTR sequence (not shown). |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.