The Detail page: representing the detail information for virus-host related ncRNA interaction;
The Binding page: representing the predicted binding sites.
The Network page: representing the interaction sub-network of interacting ncRNA/Interactor.
- Detail
- Binding
- Network
| Detail: | |
| Vhid: | VHID00010842 |
|---|---|
| Virus: | Marek's disease virus 1(MDV-1) |
| Host Species: | Gallus gallus |
| ncRNA Source: | Virus |
| ncRNA Category: | miRNA |
| ncRNA Symbol: | mdv1-miR-M4-5P |
| Tissue: | Ovary,fibroblast cell line. |
| Expression Direction of ncRNA: | - |
| Interactor in Virus or Host: | Host |
| Interactor Category: | mRNA |
| Interactor Symbol: | SPI1 |
| Expression Direction of Interactor: | - |
| Validated Method: | RNA isolation and miRNA northern blotting analysis, Luciferase reporter assays. |
| PMID: | 20680360 |
| Detailed Description: | Using luciferase reporter assays, We showed that mdv1-miR-M4-5P and miR-155 efficiently targeted a common set of 3' untranslated regions(3'UTR) of six cellular genes(GPM6B, RREB1, c-Myb, MAP3K7IP2, PU.1 and C/EBP). |
The 'First Node' or 'Second Node' option represents the sub-network of interacting ncRNA/Interactor with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting ncRNA/Interactor with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.