Detail Information

Basic Information:


  VIRBase ID:  

VVID00000234

  Virus:  

JC polyomavirus (Mad-1/SVE delta strain)

  Host:  

Homo sapiens

  Confidence Score:  

0.8808

  Interaction Type:  

Virus-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol jcv-miR-J1-5p Jvgp6
miRBase
Accession/Entrez ID
MIMAT0009147 1489521
Organism JC polyomavirus (Mad-1/SVE delta strain) JC polyomavirus (Mad-1/SVE delta strain)
Category miRNA mRNA
Alias - Jvgp6

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate jcv-miR-J1-5p
Nucleus PML tissue     32324824

Interaction Network (The top 100 interactions):


Interactor1: jcv-miR-J1-5p
Interactor2: Jvgp6

Evidence Support:


Strong-Evidence Luciferase reporter assay//Western blot
Support Database ViRBase

References:


PMID 18684810 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line 293 cells Interactor2 expression Downregulation
Description When we infected cells with JCV and then transfected them with the pooled 5p and 3p antisense inhibitors, a highly reproducible, albeit modest, increase in large-TAg protein levels was observable at late times postinfection (Fig.3B), when the miRNAs are made. These results demonstrate that the JCV miRNAs downregulate early protein levels and that the antisense inhibitors we designed were effective at blocking, at least partially, the functions of both JCV miRNAs.

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