Detail Information

Basic Information:


  VIRBase ID:  

VHID00706685

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol sars-cov-2-mir-D6-3p IL2
miRBase
Accession/Entrez ID		 sars-cov-2-mir-D6-3p 3558
Organism SARS-CoV-2 (NC_045512.2) Homo sapiens
Category miRNA mRNA
Alias - IL-2//lymphokine//TCGF

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IL2
chr4:123372952-123372953(-) m6A CDS//exon       26404942
chr4:123372977-123372978(-) m6A CDS//exon       26404942
chr4:123373007-123373008(-) m6A CDS//exon       26404942
chr4:123374870-123374871(-) m6A CDS//exon       26404942
chr4:123374904-123374905(-) m6A CDS//exon       26404942
chr4:123374912-123374913(-) m6A CDS//exon       26404942
chr4:123374925-123374926(-) m6A CDS//exon       26404942
chr4:123374963-123374964(-) m6A CDS//exon       26404942
chr4:123374969-123374970(-) m6A CDS//exon       26404942
chr4:123374993-123374994(-) m6A CDS//exon       26404942
chr4:123374999-123375000(-) m6A CDS//exon       26404942
chr4:123377507-123377508(-) m6A CDS//exon       26404942
chr4:123377539-123377540(-) m6A CDS//exon       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IL2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: sars-cov-2-mir-D6-3p
Interactor2: IL2

Evidence Support:


Prediction-Evidence miRanda//miRDB//Targetscan
Support Database ViRBase

References:


PMID 33398248 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Cytotoxin and gene regulation associated genes targeted by SARS-CoV-2 encoded miRNAs.

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