Detail Information

Basic Information:


  VIRBase ID:  

VHID00706654

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol sars-cov-2-mir-D14-3p SUMO2
miRBase
Accession/Entrez ID		 sars-cov-2-mir-D14-3p 6613
Organism SARS-CoV-2 (NC_045512.2) Homo sapiens
Category miRNA mRNA
Alias - HSMT3//Smt3A//SMT3B//SMT3H2//SUMO3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SUMO2
chr17:73175444(-) A-I      intronic
chr17:73169767(-) A-I      intronic
chr17:73173049(-) A-I      intronic
chr17:73168291(-) A-I      intronic
chr17:73169804(-) A-I      intronic
chr17:73168293(-) A-I      intronic
chr17:73173035(-) A-I      intronic
chr17:73173061(-) A-I      intronic
chr17:73173073(-) A-I      intronic
chr17:73173154(-) A-I      intronic
chr17:73173112(-) A-I      intronic
chr17:73173115(-) A-I      intronic
chr17:73173156(-) A-I      intronic
chr17:73173166(-) A-I      intronic
chr17:73174893(-) A-I      intronic
chr17:73164937(-) A-I      intronic
chr17:73164967(-) A-I      intronic
chr17:73164973(-) A-I      intronic
chr17:73165265(-) A-I      intronic
chr17:73165323(-) A-I      intronic
chr17:73165404(-) A-I      intronic
chr17:73165617(-) A-I      intronic
chr17:73164819(-) A-I      intronic
chr17:73165767(-) A-I      intronic
chr17:73168372(-) A-I      intronic
chr17:73166033(-) A-I      intronic
chr17:73176778(-) A-I      intronic
chr17:73176767(-) A-I      intronic
chr17:73176012(-) A-I      intronic
chr17:73175454(-) A-I      intronic
chr17:73175132(-) A-I      intronic
chr17:73174892(-) A-I      intronic
chr17:73174802(-) A-I      intronic
chr17:73174696(-) A-I      intronic
chr17:73174546(-) A-I      intronic
chr17:73164760(-) A-I      intronic
chr17:73174526(-) A-I      intronic
chr17:73174424(-) A-I      intronic
chr17:73173615(-) A-I      intronic
chr17:73172667(-) A-I      intronic
chr17:73172587(-) A-I      intronic
chr17:73172528(-) A-I      intronic
chr17:73172328(-) A-I      intronic
chr17:73172314(-) A-I      intronic
chr17:73172313(-) A-I      intronic
chr17:73171884(-) A-I      intronic
chr17:73171860(-) A-I      intronic
chr17:73171856(-) A-I      intronic
chr17:73171830(-) A-I      intronic
chr17:73171618(-) A-I      intronic
chr17:73171578(-) A-I      intronic
chr17:73171574(-) A-I      intronic
chr17:73171508(-) A-I      intronic
chr17:73171507(-) A-I      intronic
chr17:73171260(-) A-I      intronic
chr17:73170264(-) A-I      intronic
chr17:73169837(-) A-I      intronic
chr17:73169799(-) A-I      intronic
chr17:73169790(-) A-I      intronic
chr17:73169788(-) A-I      intronic
chr17:73169487(-) A-I      intronic
chr17:73170442(-) A-I      intronic
chr17:73168366(-) A-I      intronic
chr17:73168348(-) A-I      intronic
chr17:73168340(-) A-I      intronic
chr17:73168334(-) A-I      intronic
chr17:73168297(-) A-I      intronic
chr17:73168287(-) A-I      intronic
chr17:73168285(-) A-I      intronic
chr17:73167352(-) A-I      intronic
chr17:73167329(-) A-I      intronic
chr17:73167293(-) A-I      intronic
chr17:73166251(-) A-I      intronic
chr17:73166233(-) A-I      intronic
chr17:73164817(-) A-I      intronic
chr17:73165673(-) A-I      intronic
chr17:73164835(-) A-I      intronic
chr17:73170625(-) A-I      intronic
chr17:73164946(-) A-I      intronic
chr17:73172273(-) A-I      intronic
chr17:73166639(-) A-I      intronic
chr17:73170373(-) A-I      intronic
chr17:73168975(-) A-I      intronic
chr17:73165058(-) A-I      intronic
chr17:73166228(-) A-I      intronic
chr17:73169768(-) A-I      intronic
chr17:73166084(-) A-I      intronic
chr17:73166150(-) A-I      intronic
chr17:73175851(-) A-I      intronic
chr17:73168962(-) A-I      intronic
chr17:73171921(-) A-I      intronic
chr17:73171192(-) A-I      intronic
chr17:73174672(-) A-I      intronic
chr17:73173665(-) A-I      intronic
chr17:73167557(-) A-I      intronic
chr17:73166087(-) A-I      intronic
chr17:73168511(-) A-I      intronic
chr17:73169718(-) A-I      intronic
chr17:73175031(-) A-I      intronic
chr17:73169294(-) A-I      intronic
chr17:73170305(-) A-I      intronic
chr17:73169698(-) A-I      intronic
chr17:73172291(-) A-I      intronic
chr17:73164989(-) A-I      intronic
chr17:73168478(-) A-I      intronic
chr17:73168958(-) A-I      intronic
chr17:73166164(-) A-I      intronic
chr17:73171788(-) A-I      intronic
chr17:73175986(-) A-I      intronic
chr17:73171351(-) A-I      intronic
chr17:73175935(-) A-I      intronic
chr17:73172242(-) A-I      intronic
chr17:73168995(-) A-I      intronic
chr17:73174967(-) A-I      intronic
chr17:73164809(-) A-I      intronic
chr17:73169518(-) A-I      intronic
chr17:73166919(-) A-I      intronic
chr17:73169468(-) A-I      intronic
chr17:73170482(-) A-I      intronic
chr17:73164765(-) A-I      intronic
chr17:73175084(-) A-I      intronic
chr17:73165707(-) A-I      intronic
chr17:73167526(-) A-I      intronic
chr17:73165067(-) A-I      intronic
chr17:73172232(-) A-I      intronic
chr17:73165575(-) A-I      intronic
chr17:73166662(-) A-I      intronic
chr17:73173621(-) A-I      intronic
chr17:73171892(-) A-I      intronic
chr17:73175560(-) A-I      intronic
chr17:73175933(-) A-I      intronic
chr17:73173612(-) A-I      intronic
chr17:73168393(-) A-I      intronic
chr17:73170403(-) A-I      intronic
chr17:73169327(-) A-I      intronic
chr17:73176316(-) A-I      intronic
chr17:73176253(-) A-I      intronic
chr17:73175019(-) A-I      intronic
chr17:73167361(-) A-I      intronic
chr17:73168940(-) A-I      intronic
chr17:73168300(-) A-I      intronic
chr17:73169474(-) A-I      intronic
chr17:73176769(-) A-I      intronic
chr17:73165305(-) A-I      intronic
chr17:73175582(-) A-I      intronic
chr17:73169746(-) A-I      intronic
chr17:73166493(-) A-I      intronic
chr17:73174828(-) A-I      intronic
chr17:73174787(-) A-I      intronic
chr17:73169378(-) A-I      intronic
chr17:73169630(-) A-I      intronic
chr17:73175931(-) A-I      intronic
chr17:73171608(-) A-I      intronic
chr17:73171242(-) A-I      intronic
chr17:73165052(-) A-I      intronic
chr17:73165232(-) A-I      intronic
chr17:73171907(-) A-I      intronic
chr17:73176363(-) A-I      intronic
chr17:73166163(-) A-I      intronic
chr17:73165590(-) A-I      intronic
chr17:73174253(-) A-I      intronic
chr17:73176177(-) A-I      intronic
chr17:73165922(-) A-I      intronic
chr17:73176628(-) A-I      intronic
chr17:73171795(-) A-I      intronic
chr17:73175379(-) A-I      intronic
chr17:73176362(-) A-I      intronic
chr17:73173668(-) A-I      intronic
chr17:73167388(-) A-I      intronic
chr17:73171257(-) A-I      intronic
chr17:73166499(-) A-I      intronic
chr17:73169454(-) A-I      intronic
chr17:73172635(-) A-I      intronic
chr17:73165122(-) A-I      intronic
chr17:73175501(-) A-I      intronic
chr17:73170386(-) A-I      intronic
chr17:73172309(-) A-I      intronic
chr17:73170240(-) A-I      intronic
chr17:73172554(-) A-I      intronic
chr17:73165993(-) A-I      intronic
chr17:73175004(-) A-I      intronic
chr17:73172701(-) A-I      intronic
chr17:73169409(-) A-I      intronic
chr17:73170619(-) A-I      intronic
chr17:73171139(-) A-I      intronic
chr17:73174699(-) A-I      intronic
chr17:73172563(-) A-I      intronic
chr17:73176019(-) A-I      intronic
chr17:73165753(-) A-I      intronic
chr17:73175003(-) A-I      intronic
chr17:73175852(-) A-I      intronic
chr17:73172628(-) A-I      intronic
chr17:73175457(-) A-I      intronic
chr17:73165750(-) A-I      intronic
chr17:73176219(-) A-I      intronic
chr17:73168493(-) A-I      intronic
chr17:73165131(-) A-I      intronic
chr17:73166565(-) A-I      intronic
chr17:73170450(-) A-I      intronic
chr17:73175456(-) A-I      intronic
chr17:73172685(-) A-I      intronic
chr17:73169691(-) A-I      intronic
chr17:73174668(-) A-I      intronic
chr17:73175891(-) A-I      intronic
chr17:73172259(-) A-I      intronic
chr17:73164826(-) A-I      intronic
chr17:73175938(-) A-I      intronic
chr17:73174812(-) A-I      intronic
chr17:73175934(-) A-I      intronic
chr17:73173738(-) A-I      intronic
chr17:73176231(-) A-I      intronic
chr17:73176247(-) A-I      intronic
chr17:73166582(-) A-I      intronic
chr17:73172206(-) A-I      intronic
chr17:73169796(-) A-I      intronic
chr17:73169739(-) A-I      intronic
chr17:73165215(-) A-I      intronic
chr17:73169708(-) A-I      intronic
chr17:73166823(-) A-I      intronic
chr17:73164932(-) A-I      intronic
chr17:73165555(-) A-I      intronic
chr17:73170319(-) A-I      intronic
chr17:73168274(-) A-I      intronic
chr17:73166422(-) A-I      intronic
chr17:73165377(-) A-I      intronic
chr17:73165884(-) A-I      intronic
chr17:73175932(-) A-I      intronic
chr17:73176013(-) A-I      intronic
chr17:73174761(-) A-I      intronic
chr17:73166885(-) A-I      intronic
chr17:73167509(-) A-I      intronic
chr17:73169331(-) A-I      intronic
chr17:73172299(-) A-I      intronic
chr17:73171657(-) A-I      intronic
chr17:73169479(-) A-I      intronic
chr17:73172571(-) A-I      intronic
chr17:73167487(-) A-I      intronic
chr17:73172007(-) A-I      intronic
chr17:73165844(-) A-I      intronic
chr17:73166172(-) A-I      intronic
chr17:73166189(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SUMO2
chr17:73164084-73164085(-) Y 3'UTR       25219674
chr17:73164219-73164220(-) m6A 3'UTR       24981863
chr17:73164350-73164351(-) Y 3'UTR       25219674
chr17:73164363-73164364(-) m6A 3'UTR       24981863
chr17:73164389-73164390(-) m6A 3'UTR       24981863
chr17:73170863-73170864(-) m6A CDS//intron       27773535//22575960
chr17:73177178-73177179(-) m6A 5'UTR//CDS       27773535//22575960
chr17:73177263-73177264(-) m6A 5'UTR//CDS       27773535
chr17:73177270-73177271(-) m6A 5'UTR//CDS       27773535
chr17:73178979-73178980(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SUMO2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: sars-cov-2-mir-D14-3p
Interactor2: SUMO2

Evidence Support:


Prediction-Evidence miRanda//miRDB//Targetscan
Support Database ViRBase

References:


PMID 33398248 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Cytotoxin and gene regulation associated genes targeted by SARS-CoV-2 encoded miRNAs.

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