Detail Information

Basic Information:


  VIRBase ID:  

VHID00706038

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:           NKPD1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-3p NKPD1
miRBase
Accession/Entrez ID
MIMAT0006017 284353
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NKPD1
chr19:45654988-45654989(-) m6A 3'UTR       25456834
chr19:45655048-45655049(-) m6A 3'UTR       25456834//27371828
chr19:45655067-45655068(-) m6A 3'UTR       25456834//27371828
chr19:45655124-45655125(-) m6A 3'UTR       25456834//27371828
chr19:45655187-45655188(-) m6A 3'UTR       25456834//27371828
chr19:45655274-45655275(-) m6A CDS       25456834
chr19:45655454-45655455(-) m6A CDS       -
chr19:45656213-45656214(-) m6A CDS       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NKPD1
Chromatin K562 cells     -
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-TAR-3p

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-3p
Interactor2: NKPD1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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