Basic Information:

  VIRBase ID:  

VHID00705913

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:  MIMAT0006017          BEND6:  NM_152731     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-3p	BEND6
miRBase Accession/Entrez ID	MIMAT0006017	221336
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C6orf65

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BEND6	chr6:56838715(+) A-I      intronic chr6:56842564(+) A-I      intronic chr6:56833308(+) A-I      intronic chr6:56833319(+) A-I      intronic chr6:56838664(+) A-I      intronic chr6:56839895(+) A-I      intronic chr6:56839897(+) A-I      intronic chr6:56839899(+) A-I      intronic chr6:56872518(+) A-I      intronic chr6:56841033(+) A-I      intronic chr6:56841615(+) A-I      intronic chr6:56842718(+) A-I      intronic chr6:56842712(+) A-I      intronic chr6:56842618(+) A-I      intronic chr6:56870241(+) A-I      intronic chr6:56870240(+) A-I      intronic chr6:56870219(+) A-I      intronic chr6:56870202(+) A-I      intronic chr6:56842605(+) A-I      intronic chr6:56866171(+) A-I      intronic chr6:56858986(+) A-I      intronic chr6:56858629(+) A-I      intronic chr6:56842601(+) A-I      intronic chr6:56842600(+) A-I      intronic chr6:56842590(+) A-I      intronic chr6:56841573(+) A-I      intronic chr6:56833305(+) A-I      intronic chr6:56841598(+) A-I      intronic chr6:56833342(+) A-I      intronic chr6:56833231(+) A-I      intronic chr6:56851137(+) A-I      intronic chr6:56833775(+) A-I      intronic chr6:56838736(+) A-I      intronic chr6:56852996(+) A-I      intronic chr6:56861086(+) A-I      intronic chr6:56866235(+) A-I      intronic chr6:56845851(+) A-I      intronic chr6:56861080(+) A-I      intronic chr6:56870399(+) A-I      intronic chr6:56845087(+) A-I      intronic chr6:56833322(+) A-I      intronic chr6:56872351(+) A-I      intronic chr6:56871826(+) A-I      intronic chr6:56866197(+) A-I      intronic chr6:56852895(+) A-I      intronic chr6:56842680(+) A-I      intronic chr6:56866021(+) A-I      intronic chr6:56838651(+) A-I      intronic chr6:56859039(+) A-I      intronic chr6:56884763(+) A-I      intronic chr6:56845126(+) A-I      intronic chr6:56839802(+) A-I      intronic chr6:56838803(+) A-I      intronic chr6:56858703(+) A-I      intronic chr6:56845821(+) A-I      intronic chr6:56866056(+) A-I      intronic chr6:56876315(+) A-I      intronic chr6:56858661(+) A-I      intronic chr6:56858669(+) A-I      intronic chr6:56842652(+) A-I      intronic chr6:56853643(+) A-I      intronic chr6:56838786(+) A-I      intronic chr6:56842540(+) A-I      intronic chr6:56872503(+) A-I      intronic chr6:56833837(+) A-I      intronic chr6:56845786(+) A-I      intronic chr6:56842485(+) A-I      intronic chr6:56884776(+) A-I      intronic chr6:56861085(+) A-I      intronic chr6:56884663(+) A-I      intronic chr6:56846947(+) A-I      intronic chr6:56858653(+) A-I      intronic chr6:56884790(+) A-I      intronic chr6:56839797(+) A-I      intronic chr6:56872061(+) A-I      intronic chr6:56842500(+) A-I      intronic chr6:56843006(+) A-I      intronic chr6:56872374(+) A-I      intronic chr6:56862557(+) A-I      intronic chr6:56839762(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BEND6	chr6:56840683(+) A-I intron -    22327324 chr6:56840740(+) A-I intron -    22327324 chr6:56833231(+) A-G intron -    22484847 chr6:56833322(+) A-G intron -    22484847 chr6:56833342(+) A-G intron -    22484847 chr6:56833356(+) A-G intron -    22484847 chr6:56838786(+) A-G intron -    22484847 chr6:56838803(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BEND6	chr6:56846677-56846678(+) m6A CDS       24981863//22608085 chr6:56846683-56846684(+) m6A CDS       24981863//22608085 chr6:56846690-56846691(+) m6A CDS       24981863//22608085 chr6:56846724-56846725(+) m6A CDS       24981863//22608085 chr6:56857179-56857180(+) m6A CDS       24981863//22608085 chr6:56869375-56869376(+) m6A intron       - chr6:56869495-56869496(+) m6A intron       - chr6:56869504-56869505(+) m6A intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BEND6	Chromatin K562 cells     - Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-TAR-3p	l-685,458       5479543 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-3p
Interactor2: BEND6

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg