Basic Information:

  VIRBase ID:  

VHID00705898

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:  MIMAT0006017          LTO1:  NM_153451     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-3p	LTO1
miRBase Accession/Entrez ID	MIMAT0006017	220064
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CIAB1//ORAOV1//TAOS1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LTO1	chr11:69480693(-) A-I      3'UTR chr11:69485731(-) A-I      intronic chr11:69483684(-) A-I      intronic chr11:69480701(-) A-I      3'UTR chr11:69480712(-) A-I      3'UTR chr11:69483633(-) A-I      intronic chr11:69485917(-) A-I      intronic chr11:69485895(-) A-I      intronic chr11:69485754(-) A-I      intronic chr11:69488659(-) A-I      intronic chr11:69485807(-) A-I      intronic chr11:69485732(-) A-I      intronic chr11:69483794(-) A-I      intronic chr11:69483782(-) A-I      intronic chr11:69483749(-) A-I      intronic chr11:69483733(-) A-I      intronic chr11:69483727(-) A-I      intronic chr11:69483720(-) A-I      intronic chr11:69483674(-) A-I      intronic chr11:69483648(-) A-I      intronic chr11:69483647(-) A-I      intronic chr11:69480836(-) A-I      3'UTR chr11:69480660(-) A-I      3'UTR chr11:69480876(-) A-I      3'UTR chr11:69480890(-) A-I      3'UTR chr11:69480757(-) A-I      3'UTR chr11:69480841(-) A-I      3'UTR chr11:69480804(-) A-I      3'UTR chr11:69480915(-) A-I      3'UTR chr11:69480774(-) A-I      3'UTR chr11:69488710(-) A-I      intronic chr11:69485699(-) A-I      intronic chr11:69485862(-) A-I      intronic chr11:69483639(-) A-I      intronic chr11:69485766(-) A-I      intronic chr11:69483696(-) A-I      intronic chr11:69485939(-) A-I      intronic chr11:69483539(-) A-I      intronic chr11:69483552(-) A-I      intronic chr11:69485761(-) A-I      intronic chr11:69485942(-) A-I      intronic chr11:69480840(-) A-I      3'UTR chr11:69480731(-) A-I      3'UTR chr11:69480909(-) A-I      3'UTR chr11:69480823(-) A-I      3'UTR chr11:69480678(-) A-I      3'UTR chr11:69480799(-) A-I      3'UTR chr11:69480922(-) A-I      3'UTR chr11:69480860(-) A-I      3'UTR chr11:69480811(-) A-I      3'UTR chr11:69480760(-) A-I      3'UTR chr11:69480801(-) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LTO1	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-TAR-3p	l-685,458       5479543 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-3p
Interactor2: LTO1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg