Detail Information

Basic Information:


  VIRBase ID:  

VHID00705810

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:           TMEM64:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-3p TMEM64
miRBase
Accession/Entrez ID		 MIMAT0006017 169200
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMEM64
chr8:91634346-91634347(-) m6A 3'UTR       27773535
chr8:91637789-91637790(-) m6A 3'UTR       24981863
chr8:91637794-91637795(-) m6A 3'UTR       24981863
chr8:91637821-91637822(-) m6A 3'UTR       24284625//24981863//22608085
chr8:91637936-91637937(-) m6A CDS       24284625//24981863//26404942//22608085
chr8:91638003-91638004(-) m6A CDS       24284625//24981863//26404942//22608085
chr8:91643815-91643816(-) m6A CDS//intron       24284625//22608085
chr8:91643838-91643839(-) m6A CDS//intron       24284625
chr8:91643887-91643888(-) m6A CDS//intron       24284625
chr8:91657810-91657811(-) m6A CDS//intron       25456834//27773536
chr8:91658002-91658003(-) m6A CDS//intron       24209618//27773536
chr8:91658214-91658215(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828//27773536//22608085
chr8:91696125-91696126(-) m6A exon//intron       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TMEM64
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-TAR-3p
l-685,458       5479543
Pha-665752       10461815

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-3p
Interactor2: TMEM64

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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