Detail Information

Basic Information:


  VIRBase ID:  

VHID00705656

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:           NOTUM:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-3p NOTUM
miRBase
Accession/Entrez ID		 MIMAT0006017 147111
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - hNOTUM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NOTUM
chr17:79911754(-) A-I      intronic
chr17:79911513(-) A-I      intronic
chr17:79918094(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NOTUM
chr17:79910544-79910545(-) m6A 3'UTR       24284625
chr17:79910640-79910641(-) m6A 3'UTR       24284625//24209618//25456834//27773535//27371828//27773536
chr17:79910647-79910648(-) m6A 3'UTR       24284625//24209618//25456834//27773535//27371828//27773536
chr17:79910736-79910737(-) m6A 3'UTR       24284625//24209618//25456834//27371828//27773536
chr17:79910795-79910796(-) m6A 3'UTR       24284625//24209618//25456834//27371828//27773536//22575960
chr17:79910831-79910832(-) m6A 3'UTR       24284625//24209618//25456834//27371828//27773536//22575960
chr17:79910881-79910882(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960
chr17:79910966-79910967(-) m6A CDS       25456834//27371828//27773536//22575960
chr17:79911014-79911015(-) m6A CDS       -
chr17:79911048-79911049(-) m6A CDS       27773536
chr17:79911083-79911084(-) m6A CDS       27773536
chr17:79913311-79913312(-) m6A CDS       27773536
chr17:79913368-79913369(-) m6A CDS       -
chr17:79914563-79914564(-) m6A CDS       -
chr17:79914812-79914813(-) m6A CDS       24209618
chr17:79914836-79914837(-) m6A CDS       24209618
chr17:79914917-79914918(-) m6A CDS       24209618
chr17:79919032-79919033(-) m6A 5'UTR//intron       24209618

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NOTUM
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-TAR-3p
l-685,458       5479543
Pha-665752       10461815

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-3p
Interactor2: NOTUM

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...