Basic Information:

  VIRBase ID:  

VHID00704806

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:  MIMAT0006017          SLC52A2:  NM_001363118     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-3p	SLC52A2
miRBase Accession/Entrez ID	MIMAT0006017	79581
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BVVLS2//D15Ertd747e//GPCR41//GPR172A//hRFT3//PAR1//RFT3//RFVT2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC52A2	chr8:145582223-145582224(+) m6A 5'UTR//intron       24981863 chr8:145582260-145582261(+) m6A 5'UTR//exon//intron       24981863 chr8:145582312-145582313(+) m6A 5'UTR//exon//intron       24209618//25456834//24981863//22575960 chr8:145582396-145582397(+) m6A 5'UTR//exon//intron       24209618//22575960 chr8:145582412-145582413(+) m6A 5'UTR//exon//intron       24209618//22575960 chr8:145582904-145582905(+) m6A 5'UTR//exon       24284625 chr8:145583327-145583328(+) m6A CDS//exon//intron       24284625 chr8:145583945-145583946(+) m6A 3'UTR//CDS//intron       24284625 chr8:145584649-145584650(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085 chr8:145584658-145584659(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085 chr8:145584691-145584692(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960//22608085 chr8:145584783-145584784(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr8:145584856-145584857(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr8:145584893-145584894(+) m6A 3'UTR       25456834//24981863//22608085 chr8:145584918-145584919(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC52A2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-TAR-3p	l-685,458       5479543 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-3p
Interactor2: SLC52A2

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg