Basic Information:

  VIRBase ID:  

VHID00704550

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:  MIMAT0006017          FNIP2:  NM_001323916     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-3p	FNIP2
miRBase Accession/Entrez ID	MIMAT0006017	57600
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FNIPL//MAPO1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FNIP2	chr4:159759634(+) A-I      intronic chr4:159806155(+) A-I      intronic chr4:159806161(+) A-I      intronic chr4:159806187(+) A-I      intronic chr4:159806193(+) A-I      intronic chr4:159810324(+) A-I      intronic chr4:159701019(+) A-I      intronic chr4:159743127(+) A-I      intronic chr4:159701975(+) A-I      intronic chr4:159701995(+) A-I      intronic chr4:159701999(+) A-I      intronic chr4:159711649(+) A-I      intronic chr4:159711792(+) A-I      intronic chr4:159713117(+) A-I      intronic chr4:159713191(+) A-I      intronic chr4:159713195(+) A-I      intronic chr4:159718745(+) A-I      intronic chr4:159718772(+) A-I      intronic chr4:159718792(+) A-I      intronic chr4:159719272(+) A-I      intronic chr4:159719436(+) A-I      intronic chr4:159728448(+) A-I      intronic chr4:159728449(+) A-I      intronic chr4:159728471(+) A-I      intronic chr4:159728472(+) A-I      intronic chr4:159737657(+) A-I      intronic chr4:159737686(+) A-I      intronic chr4:159737816(+) A-I      intronic chr4:159710573(+) A-I      intronic chr4:159738816(+) A-I      intronic chr4:159738959(+) A-I      intronic chr4:159738965(+) A-I      intronic chr4:159743025(+) A-I      intronic chr4:159743084(+) A-I      intronic chr4:159743088(+) A-I      intronic chr4:159743095(+) A-I      intronic chr4:159743144(+) A-I      intronic chr4:159743165(+) A-I      intronic chr4:159700822(+) A-I      intronic chr4:159700855(+) A-I      intronic chr4:159700970(+) A-I      intronic chr4:159743496(+) A-I      intronic chr4:159743510(+) A-I      intronic chr4:159743516(+) A-I      intronic chr4:159743520(+) A-I      intronic chr4:159757841(+) A-I      intronic chr4:159757847(+) A-I      intronic chr4:159757896(+) A-I      intronic chr4:159757913(+) A-I      intronic chr4:159757928(+) A-I      intronic chr4:159759506(+) A-I      intronic chr4:159759514(+) A-I      intronic chr4:159785473(+) A-I      intronic chr4:159718821(+) A-I      intronic chr4:159701286(+) A-I      intronic chr4:159759436(+) A-I      intronic chr4:159757845(+) A-I      intronic chr4:159744551(+) A-I      intronic chr4:159743001(+) A-I      intronic chr4:159701105(+) A-I      intronic chr4:159757789(+) A-I      intronic chr4:159738752(+) A-I      intronic chr4:159806253(+) A-I      intronic chr4:159718737(+) A-I      intronic chr4:159796118(+) A-I      intronic chr4:159719261(+) A-I      intronic chr4:159719266(+) A-I      intronic chr4:159737685(+) A-I      intronic chr4:159759434(+) A-I      intronic chr4:159743429(+) A-I      intronic chr4:159700791(+) A-I      intronic chr4:159737702(+) A-I      intronic chr4:159718594(+) A-I      intronic chr4:159719350(+) A-I      intronic chr4:159701135(+) A-I      intronic chr4:159743099(+) A-I      intronic chr4:159757931(+) A-I      intronic chr4:159810233(+) A-I      intronic chr4:159757989(+) A-I      intronic chr4:159718731(+) A-I      intronic chr4:159757780(+) A-I      intronic chr4:159743154(+) A-I      intronic chr4:159757682(+) A-I      intronic chr4:159810156(+) A-I      intronic chr4:159719316(+) A-I      intronic chr4:159757690(+) A-I      intronic chr4:159701317(+) A-I      intronic chr4:159700783(+) A-I      intronic chr4:159759625(+) A-I      intronic chr4:159757720(+) A-I      intronic chr4:159761705(+) A-I      intronic chr4:159743061(+) A-I      intronic chr4:159711675(+) A-I      intronic chr4:159808779(+) A-I      intronic chr4:159702128(+) A-I      intronic chr4:159701106(+) A-I      intronic chr4:159806237(+) A-I      intronic chr4:159808770(+) A-I      intronic chr4:159718596(+) A-I      intronic chr4:159794206(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FNIP2	chr4:159757682(+) A-I intron -    15342557 chr4:159757690(+) A-I intron -    15342557 chr4:159757716(+) A-I intron -    15342557 chr4:159757720(+) A-I intron -    15342557 chr4:159757780(+) A-I intron -    15342557 chr4:159757789(+) A-I intron -    15342557 chr4:159719190(+) A-G intron -    22484847 chr4:159700783(+) A-G intron -    22484847 chr4:159700791(+) A-G intron -    22484847 chr4:159700949(+) A-G intron -    22484847 chr4:159701010(+) A-G intron -    22484847 chr4:159701018(+) A-G intron -    22484847 chr4:159713119(+) A-G intron -    22484847 chr4:159718594(+) A-G intron -    22484847 chr4:159718596(+) A-G intron -    22484847 chr4:159718731(+) A-G intron -    22484847 chr4:159718737(+) A-G intron -    22484847 chr4:159718821(+) A-G intron -    22484847 chr4:159719261(+) A-G intron -    22484847 chr4:159719266(+) A-G intron -    22484847 chr4:159719316(+) A-G intron -    22484847 chr4:159719346(+) A-G intron -    22484847 chr4:159719350(+) A-G intron -    22484847 chr4:159719356(+) A-G intron -    22484847 chr4:159737790(+) A-G intron -    22484847 chr4:159743061(+) A-G intron -    22484847 chr4:159743078(+) A-G intron -    22484847 chr4:159743099(+) A-G intron -    22484847 chr4:159743429(+) A-G intron -    22484847 chr4:159785473(+) A-G intron -    22484847 chr4:159794206(+) A-G intron -    22484847 chr4:159808770(+) A-G intron -    22484847 chr4:159810045(+) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FNIP2	chr4:159789557-159789558(+) m6A CDS       24284625//24209618//24981863//22608085 chr4:159789613-159789614(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159789626-159789627(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159789716-159789717(+) m6A CDS       24981863//22608085 chr4:159789779-159789780(+) m6A CDS       24209618//24981863//22608085 chr4:159789820-159789821(+) m6A CDS       24284625//24209618//24981863//22608085 chr4:159789866-159789867(+) m6A CDS       24284625//24209618//24981863//22608085 chr4:159789874-159789875(+) m6A CDS       24284625//24209618//24981863//22608085 chr4:159789905-159789906(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159789920-159789921(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790066-159790067(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790094-159790095(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790180-159790181(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790328-159790329(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790434-159790435(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr4:159790444-159790445(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr4:159790483-159790484(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:159790542-159790543(+) m6A CDS       24284625//25456834//24981863//22608085 chr4:159791496-159791497(+) m6A CDS       22608085 chr4:159825659-159825660(+) Y CDS       26075521 chr4:159825709-159825710(+) m6A 3'UTR       24981863//27773535//22608085 chr4:159825799-159825800(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr4:159825805-159825806(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr4:159825863-159825864(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr4:159825905-159825906(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr4:159825944-159825945(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr4:159825967-159825968(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr4:159825980-159825981(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr4:159826030-159826031(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr4:159826082-159826083(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr4:159826114-159826115(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr4:159826124-159826125(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr4:159826144-159826145(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr4:159826162-159826163(+) m6A 3'UTR       24209618//24981863//22608085 chr4:159826195-159826196(+) m6A 3'UTR       24981863//22608085 chr4:159826393-159826394(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FNIP2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-TAR-3p	l-685,458       5479543 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-3p
Interactor2: FNIP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg