Detail Information

Basic Information:


  VIRBase ID:  

VHID00703127

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:           TNK2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-3p TNK2
miRBase
Accession/Entrez ID		 MIMAT0006017 10188
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - ACK//ACK-1//ACK1//p21cdc42Hs

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TNK2
chr3:195618129(-) A-I      intronic
chr3:195618056(-) A-I      intronic
chr3:195626237(-) A-I      intronic
chr3:195632235(-) A-I      intronic
chr3:195626294(-) A-I      intronic
chr3:195617511(-) A-I      intronic
chr3:195617487(-) A-I      intronic
chr3:195630542(-) A-I      intronic
chr3:195625812(-) A-I      intronic
chr3:195625800(-) A-I      intronic
chr3:195617394(-) A-I      intronic
chr3:195625781(-) A-I      intronic
chr3:195625721(-) A-I      intronic
chr3:195626295(-) A-I      intronic
chr3:195626375(-) A-I      intronic
chr3:195626376(-) A-I      intronic
chr3:195629803(-) A-I      intronic
chr3:195629790(-) A-I      intronic
chr3:195629769(-) A-I      intronic
chr3:195626380(-) A-I      intronic
chr3:195617397(-) A-I      intronic
chr3:195630008(-) A-I      intronic
chr3:195626490(-) A-I      intronic
chr3:195630525(-) A-I      intronic
chr3:195630464(-) A-I      intronic
chr3:195630408(-) A-I      intronic
chr3:195630106(-) A-I      intronic
chr3:195630425(-) A-I      intronic
chr3:195631029(-) A-I      intronic
chr3:195631066(-) A-I      intronic
chr3:195617556(-) A-I      intronic
chr3:195630089(-) A-I      intronic
chr3:195629726(-) A-I      intronic
chr3:195629442(-) A-I      intronic
chr3:195625709(-) A-I      intronic
chr3:195624585(-) A-I      intronic
chr3:195624574(-) A-I      intronic
chr3:195618282(-) A-I      intronic
chr3:195618217(-) A-I      intronic
chr3:195618215(-) A-I      intronic
chr3:195629223(-) A-I      intronic
chr3:195629277(-) A-I      intronic
chr3:195629323(-) A-I      intronic
chr3:195629377(-) A-I      intronic
chr3:195629403(-) A-I      intronic
chr3:195629763(-) A-I      intronic
chr3:195624552(-) A-I      intronic
chr3:195617454(-) A-I      intronic
chr3:195625829(-) A-I      intronic
chr3:195625832(-) A-I      intronic
chr3:195625848(-) A-I      intronic
chr3:195625867(-) A-I      intronic
chr3:195625904(-) A-I      intronic
chr3:195625905(-) A-I      intronic
chr3:195626221(-) A-I      intronic
chr3:195629406(-) A-I      intronic
chr3:195626234(-) A-I      intronic
chr3:195632208(-) A-I      intronic
chr3:195630506(-) A-I      intronic
chr3:195617419(-) A-I      intronic
chr3:195617398(-) A-I      intronic
chr3:195631007(-) A-I      intronic
chr3:195631017(-) A-I      intronic
chr3:195617488(-) A-I      intronic
chr3:195630167(-) A-I      intronic
chr3:195629271(-) A-I      intronic
chr3:195629649(-) A-I      intronic
chr3:195624623(-) A-I      intronic
chr3:195624526(-) A-I      intronic
chr3:195618095(-) A-I      intronic
chr3:195617430(-) A-I      intronic
chr3:195630343(-) A-I      intronic
chr3:195630544(-) A-I      intronic
chr3:195630422(-) A-I      intronic
chr3:195626371(-) A-I      intronic
chr3:195624497(-) A-I      intronic
chr3:195629785(-) A-I      intronic
chr3:195626377(-) A-I      intronic
chr3:195624458(-) A-I      intronic
chr3:195617513(-) A-I      intronic
chr3:195630040(-) A-I      intronic
chr3:195618045(-) A-I      intronic
chr3:195593275(-) A-I      intronic
chr3:195632088(-) A-I      intronic
chr3:195630431(-) A-I      intronic
chr3:195624615(-) A-I      intronic
chr3:195629984(-) A-I      intronic
chr3:195630083(-) A-I      intronic
chr3:195626419(-) A-I      intronic
chr3:195624576(-) A-I      intronic
chr3:195626473(-) A-I      intronic
chr3:195629791(-) A-I      intronic
chr3:195629839(-) A-I      intronic
chr3:195617489(-) A-I      intronic
chr3:195630114(-) A-I      intronic
chr3:195617574(-) A-I      intronic
chr3:195624510(-) A-I      intronic
chr3:195617526(-) A-I      intronic
chr3:195618165(-) A-I      intronic
chr3:195625625(-) A-I      intronic
chr3:195630385(-) A-I      intronic
chr3:195626362(-) A-I      intronic
chr3:195629389(-) A-I      intronic
chr3:195629232(-) A-I      intronic
chr3:195630184(-) A-I      intronic
chr3:195630095(-) A-I      intronic
chr3:195629758(-) A-I      intronic
chr3:195626404(-) A-I      intronic
chr3:195626430(-) A-I      intronic
chr3:195626335(-) A-I      intronic
chr3:195625923(-) A-I      intronic
chr3:195617577(-) A-I      intronic
chr3:195626326(-) A-I      intronic
chr3:195618251(-) A-I      intronic
chr3:195630076(-) A-I      intronic
chr3:195617443(-) A-I      intronic
chr3:195618115(-) A-I      intronic
chr3:195630344(-) A-I      intronic
chr3:195629697(-) A-I      intronic
chr3:195630183(-) A-I      intronic
chr3:195629759(-) A-I      intronic
chr3:195617384(-) A-I      intronic
chr3:195629799(-) A-I      intronic
chr3:195629432(-) A-I      intronic
chr3:195629985(-) A-I      intronic
chr3:195630050(-) A-I      intronic
chr3:195630476(-) A-I      intronic
chr3:195626296(-) A-I      intronic
chr3:195624462(-) A-I      intronic
chr3:195630318(-) A-I      intronic
chr3:195626369(-) A-I      intronic
chr3:195625920(-) A-I      intronic
chr3:195632238(-) A-I      intronic
chr3:195630531(-) A-I      intronic
chr3:195618287(-) A-I      intronic
chr3:195617382(-) A-I      intronic
chr3:195624589(-) A-I      intronic
chr3:195618121(-) A-I      intronic
chr3:195626214(-) A-I      intronic
chr3:195632271(-) A-I      intronic
chr3:195617492(-) A-I      intronic
chr3:195626421(-) A-I      intronic
chr3:195618112(-) A-I      intronic
chr3:195629893(-) A-I      intronic
chr3:195630488(-) A-I      intronic
chr3:195617503(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TNK2
chr3:195617489(-) A-I intron -    22327324
chr3:195625612(-) A-I intron -    21960545
chr3:195629749(-) A-I intron -    21960545
chr3:195629758(-) A-I intron -    21960545
chr3:195629759(-) A-I intron -    21960545
chr3:195610614(-) A-G intron -    22484847
chr3:195610623(-) A-G intron -    22484847
chr3:195610624(-) A-G intron -    22484847
chr3:195610634(-) A-G intron -    22484847
chr3:195610650(-) A-G intron -    22484847
chr3:195610673(-) A-G intron -    22484847
chr3:195611392(-) A-G intron -    22484847
chr3:195611402(-) A-G intron -    22484847
chr3:195611427(-) A-G intron -    22484847
chr3:195611428(-) A-G intron -    22484847
chr3:195617382(-) A-G intron -    22484847
chr3:195617398(-) A-G intron -    22484847
chr3:195617437(-) A-G intron -    22484847
chr3:195617489(-) A-G intron -    22484847
chr3:195617492(-) A-G intron -    22484847
chr3:195617574(-) A-G intron -    22484847
chr3:195618112(-) A-G intron -    22484847
chr3:195618115(-) A-G intron -    22484847
chr3:195618128(-) A-G intron -    22484847
chr3:195618165(-) A-G intron -    22484847
chr3:195618177(-) A-G intron -    22484847
chr3:195618194(-) A-G intron -    22484847
chr3:195618251(-) A-G intron -    22484847
chr3:195624458(-) A-G intron -    22484847
chr3:195624462(-) A-G intron -    22484847
chr3:195625612(-) A-G intron -    22484847
chr3:195625621(-) A-G intron -    22484847
chr3:195625855(-) A-G intron -    22484847
chr3:195625920(-) A-G intron -    22484847
chr3:195625963(-) A-G intron -    22484847
chr3:195626283(-) A-G intron -    22484847
chr3:195626296(-) A-G intron -    22484847
chr3:195626303(-) A-G intron -    22484847
chr3:195626326(-) A-G intron -    22484847
chr3:195626335(-) A-G intron -    22484847
chr3:195626362(-) A-G intron -    22484847
chr3:195626368(-) A-G intron -    22484847
chr3:195626371(-) A-G intron -    22484847
chr3:195626419(-) A-G intron -    22484847
chr3:195626421(-) A-G intron -    22484847
chr3:195629232(-) A-G intron -    22484847
chr3:195629271(-) A-G intron -    22484847
chr3:195629354(-) A-G intron -    22484847
chr3:195629367(-) A-G intron -    22484847
chr3:195629432(-) A-G intron -    22484847
chr3:195629791(-) A-G intron -    22484847
chr3:195629794(-) A-G intron -    22484847
chr3:195629799(-) A-G intron -    22484847
chr3:195629893(-) A-G intron -    22484847
chr3:195629985(-) A-G intron -    22484847
chr3:195630050(-) A-G intron -    22484847
chr3:195630095(-) A-G intron -    22484847
chr3:195630167(-) A-G intron -    22484847
chr3:195630183(-) A-G intron -    22484847
chr3:195630318(-) A-G intron -    22484847
chr3:195630343(-) A-G intron -    22484847
chr3:195630385(-) A-G intron -    22484847
chr3:195630396(-) A-G intron -    22484847
chr3:195630422(-) A-G intron -    22484847
chr3:195630431(-) A-G intron -    22484847
chr3:195630466(-) A-G intron -    22484847
chr3:195630488(-) A-G intron -    22484847
chr3:195630505(-) A-G intron -    22484847
chr3:195630506(-) A-G intron -    22484847
chr3:195630531(-) A-G intron -    22484847
chr3:195630541(-) A-G intron -    22484847
chr3:195630544(-) A-G intron -    22484847
chr3:195630587(-) A-G intron -    22484847
chr3:195630980(-) A-T intron -    22484847
chr3:195631007(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TNK2
chr3:195590369-195590370(-) m6A 3'UTR//exon       24284625//24209618//25456834//28052920//27773535//27371828//27773536//22608085
chr3:195590394-195590395(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:195590426-195590427(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:195590443-195590444(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:195590515-195590516(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:195590526-195590527(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:195590601-195590602(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590611-195590612(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590627-195590628(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590667-195590668(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590677-195590678(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590688-195590689(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195590799-195590800(-) m6A 3'UTR//exon       24284625//27371828//22575960
chr3:195590955-195590956(-) m6A 3'UTR//exon       24284625//27371828//27773536
chr3:195593813-195593814(-) m6A CDS//exon       27371828
chr3:195594244-195594245(-) m6A CDS//exon       24284625//27371828//27773536
chr3:195594370-195594371(-) m6A CDS//exon       24284625//24209618//27371828//27773536
chr3:195594652-195594653(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960
chr3:195594683-195594684(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960
chr3:195594752-195594753(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195594810-195594811(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960
chr3:195594827-195594828(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960
chr3:195595016-195595017(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536
chr3:195595069-195595070(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//27773536
chr3:195595121-195595122(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//27371828//27773536//22575960
chr3:195595255-195595256(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195595316-195595317(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr3:195595546-195595547(-) m6A 3'UTR//CDS//exon       27371828
chr3:195595552-195595553(-) m6A 3'UTR//CDS//exon       27371828
chr3:195595578-195595579(-) m6A 3'UTR//CDS//exon       27371828
chr3:195595625-195595626(-) m6A exon//intron       27371828
chr3:195595670-195595671(-) m6A exon//intron       24284625//27371828
chr3:195597027-195597028(-) m6A 3'UTR//CDS//exon       24284625//27371828
chr3:195597052-195597053(-) m6A 3'UTR//CDS//exon       24284625//27371828
chr3:195597061-195597062(-) m6A 3'UTR//CDS//exon       24284625//27371828
chr3:195597075-195597076(-) m6A 3'UTR//CDS//exon       24284625//27371828
chr3:195599218-195599219(-) m6A CDS//exon       -
chr3:195599239-195599240(-) m6A CDS//exon       -
chr3:195599311-195599312(-) m6A CDS//exon       -
chr3:195599332-195599333(-) m6A CDS//exon       -
chr3:195605171-195605172(-) m6A CDS//exon//intron       27773536
chr3:195605176-195605177(-) m6A CDS//exon//intron       27773536
chr3:195605186-195605187(-) m6A CDS//exon//intron       27773536
chr3:195605204-195605205(-) m6A CDS//exon//intron       27773536
chr3:195605329-195605330(-) m6A CDS//exon//intron       27773536
chr3:195605356-195605357(-) m6A CDS//exon//intron       27773536
chr3:195605401-195605402(-) m6A CDS//exon//intron       27773536
chr3:195606023-195606024(-) m6A 3'UTR//CDS//exon//intron       24284625
chr3:195606157-195606158(-) m6A exon//intron       24284625
chr3:195608944-195608945(-) m6A 3'UTR//CDS//exon//intron       24284625
chr3:195608999-195609000(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//27371828
chr3:195609126-195609127(-) m6A 3'UTR//CDS//exon//intron       24284625//27371828//22575960
chr3:195609164-195609165(-) m6A 3'UTR//CDS//exon//intron       24284625//27371828
chr3:195609330-195609331(-) m6A 3'UTR//intron       -
chr3:195609348-195609349(-) m6A CDS//intron       -
chr3:195610221-195610222(-) m6A exon//intron       24284625
chr3:195611764-195611765(-) m6A 3'UTR//CDS//exon//intron       24284625
chr3:195615317-195615318(-) Am CDS//exon//intron       -
chr3:195615325-195615326(-) m6A CDS//exon//intron       27371828
chr3:195618787-195618788(-) m6A 5'UTR//intron       24284625//27371828
chr3:195619302-195619303(-) m6A 5'UTR//CDS//exon//intron       -
chr3:195619518-195619519(-) m6A 5'UTR//exon//intron       -
chr3:195619535-195619536(-) m6A 5'UTR//exon//intron       -
chr3:195619586-195619587(-) m6A 5'UTR//exon//intron       25456834
chr3:195619591-195619592(-) m6A 5'UTR//exon//intron       25456834
chr3:195619597-195619598(-) m6A 5'UTR//exon//intron       25456834
chr3:195619623-195619624(-) m6A 5'UTR//exon//intron       25456834
chr3:195621194-195621195(-) m6A 5'UTR//intron       25456834
chr3:195635423-195635424(-) m6A 5'UTR//intron       25456834//27371828
chr3:195635474-195635475(-) m6A 5'UTR//intron       24284625//25456834//27371828
chr3:195635597-195635598(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536
chr3:195635616-195635617(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536
chr3:195635654-195635655(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536
chr3:195635679-195635680(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536
chr3:195635859-195635860(-) m6A 5'UTR//intron       25456834//27371828//27773536
chr3:195635922-195635923(-) m6A 5'UTR//intron       25456834//27371828//27773536
chr3:195638678-195638679(-) m6A exon       25456834//27371828//27773536
chr3:195638720-195638721(-) m6A exon       27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TNK2
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-TAR-3p
l-685,458       5479543
Pha-665752       10461815

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-3p
Interactor2: TNK2

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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