Detail Information

Basic Information:


  VIRBase ID:  

VHID00701399

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-3p:           CAMK2D:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-3p CAMK2D
miRBase
Accession/Entrez ID		 MIMAT0006017 817
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - CAMKD

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CAMK2D
chr4:114401229(-) A-I      intronic
chr4:114401226(-) A-I      intronic
chr4:114401224(-) A-I      intronic
chr4:114401223(-) A-I      intronic
chr4:114401203(-) A-I      intronic
chr4:114401185(-) A-I      intronic
chr4:114444717(-) A-I      intronic
chr4:114571228(-) A-I      intronic
chr4:114656507(-) A-I      intronic
chr4:114656425(-) A-I      intronic
chr4:114652906(-) A-I      intronic
chr4:114652870(-) A-I      intronic
chr4:114652866(-) A-I      intronic
chr4:114652810(-) A-I      intronic
chr4:114647613(-) A-I      intronic
chr4:114624682(-) A-I      intronic
chr4:114624675(-) A-I      intronic
chr4:114624517(-) A-I      intronic
chr4:114623873(-) A-I      intronic
chr4:114623843(-) A-I      intronic
chr4:114623821(-) A-I      intronic
chr4:114607213(-) A-I      intronic
chr4:114607108(-) A-I      intronic
chr4:114606627(-) A-I      intronic
chr4:114571198(-) A-I      intronic
chr4:114571155(-) A-I      intronic
chr4:114571151(-) A-I      intronic
chr4:114571016(-) A-I      intronic
chr4:114571008(-) A-I      intronic
chr4:114560389(-) A-I      intronic
chr4:114542286(-) A-I      intronic
chr4:114542281(-) A-I      intronic
chr4:114542202(-) A-I      intronic
chr4:114538536(-) A-I      intronic
chr4:114538479(-) A-I      intronic
chr4:114538420(-) A-I      intronic
chr4:114523132(-) A-I      intronic
chr4:114523085(-) A-I      intronic
chr4:114523066(-) A-I      intronic
chr4:114522959(-) A-I      intronic
chr4:114522037(-) A-I      intronic
chr4:114521992(-) A-I      intronic
chr4:114488493(-) A-I      intronic
chr4:114488484(-) A-I      intronic
chr4:114465080(-) A-I      intronic
chr4:114463869(-) A-I      intronic
chr4:114463759(-) A-I      intronic
chr4:114463678(-) A-I      intronic
chr4:114448438(-) A-I      intronic
chr4:114444793(-) A-I      intronic
chr4:114444780(-) A-I      intronic
chr4:114407427(-) A-I      intronic
chr4:114407425(-) A-I      intronic
chr4:114407407(-) A-I      intronic
chr4:114404700(-) A-I      intronic
chr4:114404699(-) A-I      intronic
chr4:114404690(-) A-I      intronic
chr4:114404686(-) A-I      intronic
chr4:114401915(-) A-I      intronic
chr4:114401897(-) A-I      intronic
chr4:114401840(-) A-I      intronic
chr4:114401814(-) A-I      intronic
chr4:114401804(-) A-I      intronic
chr4:114401780(-) A-I      intronic
chr4:114401779(-) A-I      intronic
chr4:114401298(-) A-I      intronic
chr4:114401297(-) A-I      intronic
chr4:114401151(-) A-I      intronic
chr4:114398888(-) A-I      intronic
chr4:114398816(-) A-I      intronic
chr4:114398745(-) A-I      intronic
chr4:114395931(-) A-I      intronic
chr4:114395900(-) A-I      intronic
chr4:114391742(-) A-I      intronic
chr4:114391685(-) A-I      intronic
chr4:114427653(-) A-I      intronic
chr4:114538503(-) A-I      intronic
chr4:114584663(-) A-I      intronic
chr4:114653498(-) A-I      intronic
chr4:114653525(-) A-I      intronic
chr4:114656522(-) A-I      intronic
chr4:114653506(-) A-I      intronic
chr4:114653497(-) A-I      intronic
chr4:114653480(-) A-I      intronic
chr4:114653478(-) A-I      intronic
chr4:114653455(-) A-I      intronic
chr4:114553512(-) A-I      intronic
chr4:114553511(-) A-I      intronic
chr4:114553508(-) A-I      intronic
chr4:114606536(-) A-I      intronic
chr4:114391631(-) A-I      intronic
chr4:114656579(-) A-I      intronic
chr4:114401767(-) A-I      intronic
chr4:114656549(-) A-I      intronic
chr4:114488492(-) A-I      intronic
chr4:114581662(-) A-I      intronic
chr4:114647805(-) A-I      intronic
chr4:114606493(-) A-I      intronic
chr4:114525068(-) A-I      intronic
chr4:114445117(-) A-I      intronic
chr4:114652896(-) A-I      intronic
chr4:114538444(-) A-I      intronic
chr4:114571138(-) A-I      intronic
chr4:114571126(-) A-I      intronic
chr4:114623132(-) A-I      intronic
chr4:114391628(-) A-I      intronic
chr4:114647689(-) A-I      intronic
chr4:114543798(-) A-I      intronic
chr4:114520050(-) A-I      intronic
chr4:114581643(-) A-I      intronic
chr4:114656548(-) A-I      intronic
chr4:114407417(-) A-I      intronic
chr4:114629886(-) A-I      intronic
chr4:114445190(-) A-I      intronic
chr4:114624661(-) A-I      intronic
chr4:114656523(-) A-I      intronic
chr4:114623916(-) A-I      intronic
chr4:114488596(-) A-I      intronic
chr4:114656609(-) A-I      intronic
chr4:114606534(-) A-I      intronic
chr4:114401834(-) A-I      intronic
chr4:114652880(-) A-I      intronic
chr4:114607027(-) A-I      intronic
chr4:114606480(-) A-I      intronic
chr4:114647578(-) A-I      intronic
chr4:114523142(-) A-I      intronic
chr4:114401214(-) A-I      intronic
chr4:114520027(-) A-I      intronic
chr4:114401405(-) A-I      intronic
chr4:114647837(-) A-I      intronic
chr4:114401910(-) A-I      intronic
chr4:114656595(-) A-I      intronic
chr4:114607133(-) A-I      intronic
chr4:114581828(-) A-I      intronic
chr4:114523086(-) A-I      intronic
chr4:114606963(-) A-I      intronic
chr4:114444804(-) A-I      intronic
chr4:114571116(-) A-I      intronic
chr4:114606425(-) A-I      intronic
chr4:114465173(-) A-I      intronic
chr4:114607176(-) A-I      intronic
chr4:114606589(-) A-I      intronic
chr4:114644574(-) A-I      intronic
chr4:114448459(-) A-I      intronic
chr4:114404638(-) A-I      intronic
chr4:114541943(-) A-I      intronic
chr4:114465013(-) A-I      intronic
chr4:114653012(-) A-I      intronic
chr4:114656357(-) A-I      intronic
chr4:114542184(-) A-I      intronic
chr4:114543716(-) A-I      intronic
chr4:114522050(-) A-I      intronic
chr4:114525048(-) A-I      intronic
chr4:114653420(-) A-I      intronic
chr4:114391682(-) A-I      intronic
chr4:114653560(-) A-I      intronic
chr4:114624541(-) A-I      intronic
chr4:114624678(-) A-I      intronic
chr4:114398736(-) A-I      intronic
chr4:114624563(-) A-I      intronic
chr4:114523080(-) A-I      intronic
chr4:114553658(-) A-I      intronic
chr4:114464649(-) A-I      intronic
chr4:114444876(-) A-I      intronic
chr4:114647652(-) A-I      intronic
chr4:114428580(-) A-I      intronic
chr4:114644622(-) A-I      intronic
chr4:114656598(-) A-I      intronic
chr4:114398819(-) A-I      intronic
chr4:114607217(-) A-I      intronic
chr4:114525029(-) A-I      intronic
chr4:114637580(-) A-I      intronic
chr4:114391731(-) A-I      intronic
chr4:114672124(-) A-I      intronic
chr4:114488570(-) A-I      intronic
chr4:114465112(-) A-I      intronic
chr4:114653348(-) A-I      intronic
chr4:114471522(-) A-I      intronic
chr4:114445053(-) A-I      intronic
chr4:114391545(-) A-I      intronic
chr4:114401800(-) A-I      intronic
chr4:114465142(-) A-I      intronic
chr4:114538929(-) A-I      intronic
chr4:114653418(-) A-I      intronic
chr4:114656405(-) A-I      intronic
chr4:114401242(-) A-I      intronic
chr4:114488540(-) A-I      intronic
chr4:114543792(-) A-I      intronic
chr4:114624636(-) A-I      intronic
chr4:114656571(-) A-I      intronic
chr4:114571597(-) A-I      intronic
chr4:114445236(-) A-I      intronic
chr4:114525034(-) A-I      intronic
chr4:114581697(-) A-I      intronic
chr4:114488517(-) A-I      intronic
chr4:114391672(-) A-I      intronic
chr4:114398900(-) A-I      intronic
chr4:114444737(-) A-I      intronic
chr4:114445260(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CAMK2D
chr4:114624636(-) A-I intron -    22327324
chr4:114387415(-) T-A intron -    22484847
chr4:114401214(-) A-G intron -    22484847
chr4:114401215(-) A-G intron -    22484847
chr4:114401242(-) A-G intron -    22484847
chr4:114401246(-) A-G intron -    22484847
chr4:114401405(-) A-G intron -    22484847
chr4:114401767(-) A-G intron -    22484847
chr4:114401800(-) A-G intron -    22484847
chr4:114401824(-) A-G intron -    22484847
chr4:114401834(-) A-G intron -    22484847
chr4:114401910(-) A-G intron -    22484847
chr4:114401914(-) A-G intron -    22484847
chr4:114401945(-) A-G intron -    22484847
chr4:114407417(-) A-G intron -    22484847
chr4:114444737(-) A-G intron -    22484847
chr4:114444804(-) A-G intron -    22484847
chr4:114444876(-) A-G intron -    22484847
chr4:114445177(-) A-G intron -    22484847
chr4:114445236(-) A-G intron -    22484847
chr4:114445260(-) A-G intron -    22484847
chr4:114465076(-) A-G intron -    22484847
chr4:114465112(-) A-G intron -    22484847
chr4:114465143(-) A-G intron -    22484847
chr4:114538444(-) A-G intron -    22484847
chr4:114553658(-) A-G intron -    22484847
chr4:114566408(-) T-C intron -    22484847
chr4:114571116(-) A-G intron -    22484847
chr4:114571126(-) A-G intron -    22484847
chr4:114571138(-) A-G intron -    22484847
chr4:114607133(-) A-G intron -    22484847
chr4:114623130(-) A-G intron -    22484847
chr4:114623132(-) A-G intron -    22484847
chr4:114623844(-) A-G intron -    22484847
chr4:114623872(-) A-G intron -    22484847
chr4:114624054(-) A-G intron -    22484847
chr4:114624055(-) A-G intron -    22484847
chr4:114624636(-) A-G intron -    22484847
chr4:114624661(-) A-G intron -    22484847
chr4:114624678(-) A-G intron -    22484847
chr4:114647773(-) A-G intron -    22484847
chr4:114647805(-) A-G intron -    22484847
chr4:114652880(-) A-G intron -    22484847
chr4:114656548(-) A-G intron -    22484847
chr4:114656571(-) A-G intron -    22484847
chr4:114656574(-) A-G intron -    22484847
chr4:114656595(-) A-G intron -    22484847
chr4:114656623(-) G-A intron -    22484847
chr4:114656624(-) C-G intron -    22484847
chr4:114619886(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CAMK2D
chr4:114373158-114373159(-) m6A 3'UTR       27773535
chr4:114373202-114373203(-) m6A 3'UTR       27773535
chr4:114373281-114373282(-) m6A 3'UTR       27773535
chr4:114373339-114373340(-) m6A 3'UTR       27773535
chr4:114373359-114373360(-) m6A 3'UTR       27773535
chr4:114373380-114373381(-) m6A 3'UTR       27773535
chr4:114375423-114375424(-) m6A 3'UTR       24981863
chr4:114375441-114375442(-) m6A 3'UTR       24981863
chr4:114375462-114375463(-) m6A 3'UTR       24981863
chr4:114378251-114378252(-) m6A 3'UTR//intron       27773535
chr4:114378263-114378264(-) m6A 3'UTR//intron       27773535
chr4:114378295-114378296(-) m6A 3'UTR//intron       27773535
chr4:114378569-114378570(-) m6A CDS       26404942
chr4:114378587-114378588(-) m6A CDS       26404942
chr4:114386728-114386729(-) m6A CDS       24981863
chr4:114424095-114424096(-) m6A CDS//intron       24981863
chr4:114436303-114436304(-) m6A CDS       24981863
chr4:114436327-114436328(-) m6A CDS       24981863
chr4:114438751-114438752(-) m6A CDS       24981863
chr4:114438761-114438762(-) m6A CDS       24981863
chr4:114676008-114676009(-) m6A exon//intron       27773535
chr4:114676083-114676084(-) m6A exon//intron       27773535
chr4:114676115-114676116(-) m6A exon//intron       27773535
chr4:114676124-114676125(-) m6A exon//intron       27773535
chr4:114676177-114676178(-) m6A exon//intron       27773535
chr4:114676183-114676184(-) m6A exon//intron       27773535
chr4:114680524-114680525(-) m6A CDS//exon       27773535
chr4:114682230-114682231(-) m6A 5'UTR//exon       27773535//27773536
chr4:114682342-114682343(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828//27773536//22608085
chr4:114682421-114682422(-) m6A 5'UTR//exon       24209618//25456834//24981863//28052920//27371828//27773536//22608085
chr4:114682435-114682436(-) m6A 5'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr4:114682509-114682510(-) m6A 5'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr4:114682515-114682516(-) m6A 5'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr4:114682651-114682652(-) m6A 5'UTR       24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr4:114683019-114683020(-) m6A 5'UTR       25456834//27371828//27773536
chr4:114683051-114683052(-) m6A 5'UTR       25456834//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CAMK2D
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-TAR-3p
l-685,458       5479543
Pha-665752       10461815

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-3p
Interactor2: CAMK2D

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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