Basic Information:

  VIRBase ID:  

VHID00701123

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          ECSCR:  NM_001293739     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	ECSCR
miRBase Accession/Entrez ID	MIMAT0006016	641700
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARIA//ECSM2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ECSCR	chr5:138785165(-) A-I      intronic chr5:138785183(-) A-I      intronic chr5:138785210(-) A-I      intronic chr5:138785323(-) A-I      intronic chr5:138786365(-) A-I      intronic chr5:138786382(-) A-I      intronic chr5:138786383(-) A-I      intronic chr5:138840635(-) A-I      intronic chr5:138840685(-) A-I      intronic chr5:138840703(-) A-I      intronic chr5:138840709(-) A-I      intronic chr5:138840647(-) A-I      intronic chr5:138840664(-) A-I      intronic chr5:138786389(-) A-I      intronic chr5:138840622(-) A-I      intronic chr5:138785074(-) A-I      intronic chr5:138785151(-) A-I      intronic chr5:138840624(-) A-I      intronic chr5:138840618(-) A-I      intronic chr5:138840717(-) A-I      intronic chr5:138840661(-) A-I      intronic chr5:138840614(-) A-I      intronic chr5:138840602(-) A-I      intronic chr5:138840665(-) A-I      intronic chr5:138785704(-) A-I      intronic chr5:138785094(-) A-I      intronic chr5:138785854(-) A-I      intronic chr5:138785548(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ECSCR	chr5:138784387-138784388(-) m6A 3'UTR       - chr5:138837738-138837739(-) m6A CDS       - chr5:138842302-138842303(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ECSCR	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: ECSCR

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg