Basic Information:

  VIRBase ID:  

VHID00700759

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          CERS6:  NM_203463     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	CERS6
miRBase Accession/Entrez ID	MIMAT0006016	253782
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CERS5//LASS6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CERS6	chr2:169599982(+) A-I      intronic chr2:169615618(+) A-I      intronic chr2:169615609(+) A-I      intronic chr2:169600003(+) A-I      intronic chr2:169621559(+) A-I      intronic chr2:169621561(+) A-I      intronic chr2:169599961(+) A-I      intronic chr2:169621563(+) A-I      intronic chr2:169621454(+) A-I      intronic chr2:169599989(+) A-I      intronic chr2:169616178(+) A-I      intronic chr2:169616171(+) A-I      intronic chr2:169621568(+) A-I      intronic chr2:169349945(+) A-I      intronic chr2:169349948(+) A-I      intronic chr2:169571262(+) A-I      intronic chr2:169349984(+) A-I      intronic chr2:169621606(+) A-I      intronic chr2:169616155(+) A-I      intronic chr2:169616127(+) A-I      intronic chr2:169349992(+) A-I      intronic chr2:169350803(+) A-I      intronic chr2:169615599(+) A-I      intronic chr2:169615602(+) A-I      intronic chr2:169350866(+) A-I      intronic chr2:169571261(+) A-I      intronic chr2:169350009(+) A-I      intronic chr2:169621468(+) A-I      intronic chr2:169599881(+) A-I      intronic chr2:169616117(+) A-I      intronic chr2:169615638(+) A-I      intronic chr2:169621480(+) A-I      intronic chr2:169621463(+) A-I      intronic chr2:169578426(+) A-I      intronic chr2:169445518(+) A-I      intronic chr2:169578229(+) A-I      intronic chr2:169578228(+) A-I      intronic chr2:169531936(+) A-I      intronic chr2:169531949(+) A-I      intronic chr2:169531957(+) A-I      intronic chr2:169531919(+) A-I      intronic chr2:169592900(+) A-I      intronic chr2:169531893(+) A-I      intronic chr2:169531623(+) A-I      intronic chr2:169519121(+) A-I      intronic chr2:169601950(+) A-I      intronic chr2:169625312(+) A-I      intronic chr2:169531935(+) A-I      intronic chr2:169601940(+) A-I      intronic chr2:169601933(+) A-I      intronic chr2:169601913(+) A-I      intronic chr2:169601869(+) A-I      intronic chr2:169600697(+) A-I      intronic chr2:169600633(+) A-I      intronic chr2:169593076(+) A-I      intronic chr2:169595428(+) A-I      intronic chr2:169532283(+) A-I      intronic chr2:169534064(+) A-I      intronic chr2:169534101(+) A-I      intronic chr2:169453150(+) A-I      intronic chr2:169531942(+) A-I      intronic chr2:169519005(+) A-I      intronic chr2:169491184(+) A-I      intronic chr2:169519091(+) A-I      intronic chr2:169491023(+) A-I      intronic chr2:169486456(+) A-I      intronic chr2:169456921(+) A-I      intronic chr2:169456880(+) A-I      intronic chr2:169444665(+) A-I      intronic chr2:169624820(+) A-I      intronic chr2:169624814(+) A-I      intronic chr2:169599985(+) A-I      intronic chr2:169585329(+) A-I      intronic chr2:169585345(+) A-I      intronic chr2:169585351(+) A-I      intronic chr2:169585356(+) A-I      intronic chr2:169585358(+) A-I      intronic chr2:169585000(+) A-I      intronic chr2:169624881(+) A-I      intronic chr2:169532021(+) A-I      intronic chr2:169614172(+) A-I      intronic chr2:169611466(+) A-I      intronic chr2:169603649(+) A-I      intronic chr2:169603610(+) A-I      intronic chr2:169585366(+) A-I      intronic chr2:169532271(+) A-I      intronic chr2:169578339(+) A-I      intronic chr2:169578258(+) A-I      intronic chr2:169320212(+) A-I      intronic chr2:169320328(+) A-I      intronic chr2:169320421(+) A-I      intronic chr2:169320781(+) A-I      intronic chr2:169320868(+) A-I      intronic chr2:169336292(+) A-I      intronic chr2:169336318(+) A-I      intronic chr2:169337676(+) A-I      intronic chr2:169337677(+) A-I      intronic chr2:169337710(+) A-I      intronic chr2:169337831(+) A-I      intronic chr2:169337846(+) A-I      intronic chr2:169379091(+) A-I      intronic chr2:169379248(+) A-I      intronic chr2:169379268(+) A-I      intronic chr2:169437593(+) A-I      intronic chr2:169437629(+) A-I      intronic chr2:169437712(+) A-I      intronic chr2:169437718(+) A-I      intronic chr2:169444523(+) A-I      intronic chr2:169444565(+) A-I      intronic chr2:169444644(+) A-I      intronic chr2:169531946(+) A-I      intronic chr2:169443542(+) A-I      intronic chr2:169519163(+) A-I      intronic chr2:169625026(+) A-I      intronic chr2:169624879(+) A-I      intronic chr2:169603673(+) A-I      intronic chr2:169337714(+) A-I      intronic chr2:169532016(+) A-I      intronic chr2:169578262(+) A-I      intronic chr2:169599980(+) A-I      intronic chr2:169595537(+) A-I      intronic chr2:169578404(+) A-I      intronic chr2:169531939(+) A-I      intronic chr2:169599889(+) A-I      intronic chr2:169444506(+) A-I      intronic chr2:169602012(+) A-I      intronic chr2:169578182(+) A-I      intronic chr2:169603741(+) A-I      intronic chr2:169336301(+) A-I      intronic chr2:169592366(+) A-I      intronic chr2:169379185(+) A-I      intronic chr2:169602025(+) A-I      intronic chr2:169625154(+) A-I      intronic chr2:169600790(+) A-I      intronic chr2:169320261(+) A-I      intronic chr2:169443482(+) A-I      intronic chr2:169531734(+) A-I      intronic chr2:169330493(+) A-I      intronic chr2:169320782(+) A-I      intronic chr2:169491049(+) A-I      intronic chr2:169406710(+) A-I      intronic chr2:169531588(+) A-I      intronic chr2:169406873(+) A-I      intronic chr2:169625187(+) A-I      intronic chr2:169445349(+) A-I      intronic chr2:169595496(+) A-I      intronic chr2:169406949(+) A-I      intronic chr2:169320776(+) A-I      intronic chr2:169585357(+) A-I      intronic chr2:169320154(+) A-I      intronic chr2:169532371(+) A-I      intronic chr2:169599946(+) A-I      intronic chr2:169525147(+) A-I      intronic chr2:169531613(+) A-I      intronic chr2:169336141(+) A-I      intronic chr2:169585397(+) A-I      intronic chr2:169592460(+) A-I      intronic chr2:169599986(+) A-I      intronic chr2:169519162(+) A-I      intronic chr2:169532266(+) A-I      intronic chr2:169611483(+) A-I      intronic chr2:169625234(+) A-I      intronic chr2:169592281(+) A-I      intronic chr2:169320260(+) A-I      intronic chr2:169336175(+) A-I      intronic chr2:169518984(+) A-I      intronic chr2:169578392(+) A-I      intronic chr2:169491052(+) A-I      intronic chr2:169336248(+) A-I      intronic chr2:169453246(+) A-I      intronic chr2:169599913(+) A-I      intronic chr2:169624840(+) A-I      intronic chr2:169532296(+) A-I      intronic chr2:169531985(+) A-I      intronic chr2:169578344(+) A-I      intronic chr2:169624869(+) A-I      intronic chr2:169592293(+) A-I      intronic chr2:169595657(+) A-I      intronic chr2:169585071(+) A-I      intronic chr2:169532045(+) A-I      intronic chr2:169320802(+) A-I      intronic chr2:169320222(+) A-I      intronic chr2:169444467(+) A-I      intronic chr2:169614150(+) A-I      intronic chr2:169317915(+) A-I      intronic chr2:169319149(+) A-I      intronic chr2:169625336(+) A-I      intronic chr2:169320253(+) A-I      intronic chr2:169584072(+) A-I      intronic chr2:169319118(+) A-I      intronic chr2:169603603(+) A-I      intronic chr2:169360711(+) A-I      intronic chr2:169592461(+) A-I      intronic chr2:169406950(+) A-I      intronic chr2:169337670(+) A-I      intronic chr2:169531839(+) A-I      intronic chr2:169510863(+) A-I      intronic chr2:169625317(+) A-I      intronic chr2:169625357(+) A-I      intronic chr2:169531840(+) A-I      intronic chr2:169337804(+) A-I      intronic chr2:169337671(+) A-I      intronic chr2:169336380(+) A-I      intronic chr2:169453112(+) A-I      intronic chr2:169445488(+) A-I      intronic chr2:169611312(+) A-I      intronic chr2:169603611(+) A-I      intronic chr2:169592892(+) A-I      intronic chr2:169320304(+) A-I      intronic chr2:169600042(+) A-I      intronic chr2:169320885(+) A-I      intronic chr2:169596281(+) A-I      intronic chr2:169599916(+) A-I      intronic chr2:169602013(+) A-I      intronic chr2:169592187(+) A-I      intronic chr2:169578303(+) A-I      intronic chr2:169491048(+) A-I      intronic chr2:169531894(+) A-I      intronic chr2:169585330(+) A-I      intronic chr2:169603598(+) A-I      intronic chr2:169531659(+) A-I      intronic chr2:169531981(+) A-I      intronic chr2:169531969(+) A-I      intronic chr2:169443621(+) A-I      intronic chr2:169531633(+) A-I      intronic chr2:169326696(+) A-I      intronic chr2:169406825(+) A-I      intronic chr2:169336379(+) A-I      intronic chr2:169583977(+) A-I      intronic chr2:169360691(+) A-I      intronic chr2:169624839(+) A-I      intronic chr2:169611425(+) A-I      intronic chr2:169603607(+) A-I      intronic chr2:169518961(+) A-I      intronic chr2:169519993(+) A-I      intronic chr2:169624761(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CERS6	chr2:169519946(+) A-I intron -    21960545 chr2:169531512(+) A-I intron -    21960545 chr2:169535844(+) A-I intron -    21960545 chr2:169535845(+) A-I intron -    21960545 chr2:169538135(+) A-I intron -    21960545 chr2:169538139(+) A-I intron -    21960545 chr2:169538649(+) A-I intron -    21960545 chr2:169570547(+) A-I intron -    21960545 chr2:169577780(+) A-I intron -    21960545 chr2:169592204(+) A-I intron -    21960545 chr2:169592975(+) A-I intron -    21960545 chr2:169601387(+) A-I intron -    21960545 chr2:169601467(+) A-I intron -    21960545 chr2:169611312(+) A-I intron -    21960545 chr2:169614114(+) A-I intron -    21960545 chr2:169621448(+) A-I intron -    21960545 chr2:169621553(+) A-I intron -    21960545 chr2:169621611(+) A-I intron -    21960545 chr2:169624879(+) A-I intron -    21960545 chr2:169350082(+) A-G intron -    22484847 chr2:169350089(+) A-G intron -    22484847 chr2:169350107(+) A-G intron -    22484847 chr2:169425615(+) T-A intron -    22484847 chr2:169538072(+) A-G intron -    22484847 chr2:169538135(+) A-G intron -    22484847 chr2:169538139(+) A-G intron -    22484847 chr2:169538457(+) A-G intron -    22484847 chr2:169570572(+) A-G intron -    22484847 chr2:169570601(+) A-G intron -    22484847 chr2:169571225(+) A-G intron -    22484847 chr2:169571227(+) A-G intron -    22484847 chr2:169571266(+) A-G intron -    22484847 chr2:169320222(+) A-G intron -    22484847 chr2:169320253(+) A-G intron -    22484847 chr2:169320261(+) A-G intron -    22484847 chr2:169320304(+) A-G intron -    22484847 chr2:169320801(+) A-G intron -    22484847 chr2:169320802(+) A-G intron -    22484847 chr2:169320885(+) A-G intron -    22484847 chr2:169336141(+) A-G intron -    22484847 chr2:169336175(+) A-G intron -    22484847 chr2:169336248(+) A-G intron -    22484847 chr2:169336301(+) A-G intron -    22484847 chr2:169337670(+) A-G intron -    22484847 chr2:169337671(+) A-G intron -    22484847 chr2:169337714(+) A-G intron -    22484847 chr2:169337747(+) A-G intron -    22484847 chr2:169337804(+) A-G intron -    22484847 chr2:169340692(+) T-C intron -    22484847 chr2:169340693(+) T-C intron -    22484847 chr2:169340694(+) T-G intron -    22484847 chr2:169340695(+) T-G intron -    22484847 chr2:169360853(+) T-C intron -    22484847 chr2:169360895(+) G-A intron -    22484847 chr2:169369195(+) A-T intron -    22484847 chr2:169406710(+) A-G intron -    22484847 chr2:169406717(+) A-G intron -    22484847 chr2:169406877(+) A-G intron -    22484847 chr2:169443461(+) A-G intron -    22484847 chr2:169444608(+) G-T intron -    22484847 chr2:169445349(+) A-G intron -    22484847 chr2:169456722(+) T-C intron -    22484847 chr2:169456724(+) T-C intron -    22484847 chr2:169456726(+) T-C intron -    22484847 chr2:169458214(+) C-T intron -    22484847 chr2:169491044(+) T-C intron -    22484847 chr2:169491048(+) A-G intron -    22484847 chr2:169491049(+) A-G intron -    22484847 chr2:169491052(+) A-G intron -    22484847 chr2:169518961(+) A-G intron -    22484847 chr2:169518984(+) A-G intron -    22484847 chr2:169531588(+) A-G intron -    22484847 chr2:169531633(+) A-G intron -    22484847 chr2:169531734(+) A-G intron -    22484847 chr2:169531839(+) A-G intron -    22484847 chr2:169531840(+) A-G intron -    22484847 chr2:169531939(+) A-G intron -    22484847 chr2:169531945(+) A-G intron -    22484847 chr2:169531946(+) A-G intron -    22484847 chr2:169531965(+) A-G intron -    22484847 chr2:169531969(+) A-G intron -    22484847 chr2:169531975(+) A-G intron -    22484847 chr2:169531981(+) A-G intron -    22484847 chr2:169531985(+) A-G intron -    22484847 chr2:169532016(+) A-G intron -    22484847 chr2:169532045(+) A-G intron -    22484847 chr2:169532266(+) A-G intron -    22484847 chr2:169532296(+) A-G intron -    22484847 chr2:169532297(+) A-G intron -    22484847 chr2:169532371(+) A-G intron -    22484847 chr2:169567993(+) T-C intron -    22484847 chr2:169578262(+) A-G intron -    22484847 chr2:169583977(+) A-G intron -    22484847 chr2:169585071(+) A-G intron -    22484847 chr2:169585080(+) A-G intron -    22484847 chr2:169592293(+) A-G intron -    22484847 chr2:169592890(+) A-G intron -    22484847 chr2:169592892(+) A-G intron -    22484847 chr2:169592936(+) A-G intron -    22484847 chr2:169603598(+) A-G intron -    22484847 chr2:169603603(+) A-G intron -    22484847 chr2:169603607(+) A-G intron -    22484847 chr2:169611292(+) A-G intron -    22484847 chr2:169611312(+) A-G intron -    22484847 chr2:169611483(+) A-G intron -    22484847 chr2:169614150(+) A-G intron -    22484847 chr2:169624761(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CERS6	chr2:169312441-169312442(+) m6A 5'UTR       - chr2:169312456-169312457(+) m6A 5'UTR       - chr2:169312938-169312939(+) m6A 5'UTR       24209618 chr2:169312948-169312949(+) m6A 5'UTR       24209618//25456834 chr2:169313025-169313026(+) m6A CDS       - chr2:169313034-169313035(+) m6A CDS       - chr2:169313067-169313068(+) m6A CDS       - chr2:169626118-169626119(+) m6A CDS       24284625//24981863//22608085 chr2:169626181-169626182(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr2:169626204-169626205(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr2:169626273-169626274(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr2:169627582-169627583(+) m6A 3'UTR       24981863 chr2:169627619-169627620(+) m6A 3'UTR       24981863 chr2:169627626-169627627(+) m6A 3'UTR       24981863 chr2:169627669-169627670(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CERS6	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: CERS6

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg