Basic Information:

  VIRBase ID:  

VHID00700751

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          FNDC5:  NM_001171940     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	FNDC5
miRBase Accession/Entrez ID	MIMAT0006016	252995
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FRCP2//irisin

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FNDC5	chr1:33331043(-) T-C intron -    22484847 chr1:33331101(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FNDC5	chr1:33328359-33328360(-) m6A 3'UTR//exon//intron       25456834 chr1:33328552-33328553(-) m6A 3'UTR//exon       25456834//22608085 chr1:33328607-33328608(-) m6A 3'UTR//exon       25456834//22608085 chr1:33328653-33328654(-) m6A 3'UTR//exon       22608085 chr1:33328778-33328779(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr1:33328827-33328828(-) m6A 3'UTR//exon       24981863//22608085 chr1:33328896-33328897(-) m6A 3'UTR//exon       25456834//22608085 chr1:33328975-33328976(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:33328983-33328984(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:33329007-33329008(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:33329062-33329063(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:33329093-33329094(-) m6A 3'UTR//exon       24981863//22608085 chr1:33329138-33329139(-) m6A 3'UTR//exon       24981863//22608085 chr1:33330202-33330203(-) m6A 3'UTR//intron       25456834 chr1:33330252-33330253(-) m6A CDS//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FNDC5	Exosome Serum     25135963 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: FNDC5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg