Basic Information:

  VIRBase ID:  

VHID00700596

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          FAM171B:  NM_177454     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	FAM171B
miRBase Accession/Entrez ID	MIMAT0006016	165215
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA1946

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM171B	chr2:187618015(+) A-I      intronic chr2:187594742(+) A-I      intronic chr2:187567933(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM171B	chr2:187626250-187626251(+) m6A CDS       24981863//22608085 chr2:187626270-187626271(+) m6A CDS       24981863//22608085 chr2:187626275-187626276(+) m6A CDS       24981863//22608085 chr2:187626336-187626337(+) m6A CDS       24981863//22608085 chr2:187626363-187626364(+) m6A CDS       24981863//22608085 chr2:187626391-187626392(+) m6A CDS       24981863//22608085 chr2:187626407-187626408(+) m6A CDS       24981863//22608085 chr2:187626434-187626435(+) m6A CDS       24981863//22608085 chr2:187626507-187626508(+) m6A CDS       24981863//22608085 chr2:187626544-187626545(+) m6A CDS       24981863//22608085 chr2:187626553-187626554(+) m6A CDS       24981863//22608085 chr2:187626655-187626656(+) m6A CDS       24209618//24981863//22608085 chr2:187626698-187626699(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr2:187626724-187626725(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr2:187626766-187626767(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187626793-187626794(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187626810-187626811(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187626821-187626822(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187626974-187626975(+) m6A CDS       24209618//25456834//24981863//22608085 chr2:187627015-187627016(+) m6A CDS       24209618//25456834//24981863//22608085 chr2:187627033-187627034(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr2:187627140-187627141(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627160-187627161(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627185-187627186(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627197-187627198(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627241-187627242(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627293-187627294(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr2:187627316-187627317(+) m6A CDS       24209618//25456834//24981863//22608085 chr2:187627338-187627339(+) m6A CDS       24209618//25456834//24981863//22608085 chr2:187627471-187627472(+) m6A CDS       24209618//24981863//22608085 chr2:187627499-187627500(+) m6A CDS       24209618//24981863//22608085 chr2:187627621-187627622(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187627636-187627637(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187627660-187627661(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187627928-187627929(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187627938-187627939(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187627943-187627944(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187628029-187628030(+) m6A 3'UTR       24209618//24981863//22608085 chr2:187628164-187628165(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM171B	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: FAM171B

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg