Basic Information:

  VIRBase ID:  

VHID00700455

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          GSG1L:  NM_144675     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	GSG1L
miRBase Accession/Entrez ID	MIMAT0006016	146395
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRO19651

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GSG1L	chr16:27896702(-) A-I      intronic chr16:27905202(-) A-I      intronic chr16:27905212(-) A-I      intronic chr16:27905228(-) A-I      intronic chr16:27902958(-) A-I      intronic chr16:27878228(-) A-I      intronic chr16:27896730(-) A-I      intronic chr16:27878240(-) A-I      intronic chr16:27896742(-) A-I      intronic chr16:27905246(-) A-I      intronic chr16:27905238(-) A-I      intronic chr16:27896743(-) A-I      intronic chr16:27905247(-) A-I      intronic chr16:27878206(-) A-I      intronic chr16:27902914(-) A-I      intronic chr16:27878209(-) A-I      intronic chr16:27878204(-) A-I      intronic chr16:27878205(-) A-I      intronic chr16:27878215(-) A-I      intronic chr16:27969598(-) A-I      intronic chr16:27969594(-) A-I      intronic chr16:27969586(-) A-I      intronic chr16:27969577(-) A-I      intronic chr16:27955100(-) A-I      intronic chr16:27955079(-) A-I      intronic chr16:27955064(-) A-I      intronic chr16:27955063(-) A-I      intronic chr16:27902961(-) A-I      intronic chr16:27902962(-) A-I      intronic chr16:27902963(-) A-I      intronic chr16:27910955(-) A-I      intronic chr16:27910991(-) A-I      intronic chr16:27910994(-) A-I      intronic chr16:27911000(-) A-I      intronic chr16:27903746(-) A-I      intronic chr16:27956121(-) A-I      intronic chr16:27921071(-) A-I      intronic chr16:27955034(-) A-I      intronic chr16:27956230(-) A-I      intronic chr16:27934375(-) A-I      intronic chr16:28067009(-) A-I      intronic chr16:27921065(-) A-I      intronic chr16:27805932(-) A-I      intronic chr16:27954925(-) A-I      intronic chr16:28056913(-) A-I      intronic chr16:27922251(-) A-I      intronic chr16:27805924(-) A-I      intronic chr16:28015977(-) A-I      intronic chr16:28010642(-) A-I      intronic chr16:27825501(-) A-I      intronic chr16:27956139(-) A-I      intronic chr16:28056941(-) A-I      intronic chr16:27882823(-) A-I      intronic chr16:28009318(-) A-I      intronic chr16:27934382(-) A-I      intronic chr16:27871117(-) A-I      intronic chr16:27955163(-) A-I      intronic chr16:27857384(-) A-I      intronic chr16:27819639(-) A-I      intronic chr16:27921572(-) A-I      intronic chr16:27805925(-) A-I      intronic chr16:28057168(-) A-I      intronic chr16:28009319(-) A-I      intronic chr16:28010632(-) A-I      intronic chr16:27902926(-) A-I      intronic chr16:28010584(-) A-I      intronic chr16:27922117(-) A-I      intronic chr16:27825511(-) A-I      intronic chr16:27969578(-) A-I      intronic chr16:27822105(-) A-I      intronic chr16:27827124(-) A-I      intronic chr16:27969481(-) A-I      intronic chr16:27825448(-) A-I      intronic chr16:27905039(-) A-I      intronic chr16:27979699(-) A-I      intronic chr16:27954981(-) A-I      intronic chr16:27922252(-) A-I      intronic chr16:28048597(-) A-I      intronic chr16:27922850(-) A-I      intronic chr16:27806277(-) A-I      intronic chr16:27820496(-) A-I      intronic chr16:27869414(-) A-I      intronic chr16:28069339(-) A-I      intronic chr16:28069554(-) A-I      intronic chr16:28026581(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GSG1L	chr16:27802393-27802394(-) m6A 3'UTR       25456834 chr16:27802445-27802446(-) m6A 3'UTR       25456834 chr16:27802458-27802459(-) m6A 3'UTR       25456834 chr16:27802584-27802585(-) m6A 3'UTR       25456834 chr16:27802605-27802606(-) m6A 3'UTR       25456834 chr16:27802628-27802629(-) m6A 3'UTR       - chr16:27802665-27802666(-) m6A 3'UTR       - chr16:27802684-27802685(-) m6A 3'UTR       - chr16:27802724-27802725(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GSG1L	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: GSG1L

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg