Basic Information:

  VIRBase ID:  

VHID00700434

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          ALG10B:  NM_001308340     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	ALG10B
miRBase Accession/Entrez ID	MIMAT0006016	144245
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALG10//KCR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ALG10B	chr12:38721948(+) A-I      3'UTR chr12:38715386(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALG10B	chr12:38714112-38714113(+) m6A 3'UTR//CDS//exon//intron       24981863//22608085 chr12:38714154-38714155(+) m6A 3'UTR//CDS//exon//intron       24284625//24981863//22608085 chr12:38714223-38714224(+) m6A 3'UTR//CDS//exon//intron       24284625//24981863//22608085 chr12:38714245-38714246(+) m6A 3'UTR//CDS//exon//intron       24284625//24981863//22608085 chr12:38714267-38714268(+) m6A 3'UTR//CDS//intron       24284625//24981863//22608085 chr12:38714329-38714330(+) m6A 3'UTR//CDS//intron       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ALG10B	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: ALG10B

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg